Protein Concepts Dictionary

Tableau information

Concept source:  d4e7na_  amino acid (a.a.) range (ARG179)(ASN202)

nSSEs in this Concept: 3

String of secondary struct.elems. (SSEs) defining this concept: EHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ARG179)  (ILE185) E1
	  (LYS192)  (GLY197) H2
	  (GLY197)  (ASN202) E3

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                   
H2      132.9°   H2            
E3       78.1°  -59.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1orfa_ :   (ASN179)  (CYS201)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Granzyme A |Human (Homo sapiens) [TaxId: 9606]
 d2j92a1 :   (GLY150)  (LYS170)   [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |3C cysteine protease (picornain 3C) |Foot-and-mouth disease virus [TaxId: 12110]
 d1ty0a1 :    (ASN49)   (LEU75)   [view usage] : b.40.2.2 |OB-fold |Bacterial enterotoxins |Superantigen toxins, N-terminal domain |Streptococcal pyrogenic exotoxin Spe-J |Streptococcus pyogenes [TaxId: 1314]
 d2wv4a_ :   (GLY150)  (LYS170)   [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |Foot-and-mouth disease virus [TaxId: 12112]
 d2z0tb_ :     (MET1)   (LEU26)   [view usage] : b.122.1.6 |PUA domain-like |PUA domain-like |ProFAR isomerase associated domain |automated matches |Pyrococcus horikoshii [TaxId: 53953]
 d1v2qt_ :   (ASN179)  (SER202)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Trypsin(ogen) |Cow (Bos taurus) [TaxId: 9913]
 d1qa7b_ :   (ALA160)  (ASN180)   [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |3C cysteine protease (picornain 3C) |Human hepatitis A virus [TaxId: 208726]
 d4glfa_ :   (ASP115)  (LYS168)   [view usage] : c.56.2.0 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |automated matches |automated matches |Uncultured bacterium [TaxId: 77133]
 d1r45a_ :   (ILE124)  (GLY171)   [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Exoenzyme c3 |Clostridium botulinum C bacteriophage [TaxId: 12336]
 d1elta_ :   (THR179)  (VAL203)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Elastase |Atlantic salmon (Salmo salar) [TaxId: 8030]
 d2hrva_ :    (ASN93)  (CYS112)   [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |2A cysteine proteinase |Human rhinovirus 2 [TaxId: 12130]
 d1qa7a_ :   (GLN159)  (ASN180)   [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |3C cysteine protease (picornain 3C) |Human hepatitis A virus [TaxId: 208726]
 d1haxb_ :   (SER179)  (LEU202)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Elastase |Pig (Sus scrofa) [TaxId: 9823]
 d1v2ot_ :   (ASN179)  (SER202)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Trypsin(ogen) |Cow (Bos taurus) [TaxId: 9913]
 d1j15a_ :   (ASN179)  (CYS201)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Trypsin(ogen) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1op8a_ :   (ASN179)  (GLU202)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Granzyme A |Human (Homo sapiens) [TaxId: 9606]
 d2wv5a_ :   (GLY150)  (LYS170)   [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |Foot-and-mouth disease virus [TaxId: 12112]
 d2z0ta_ :     (MET1)   (LEU26)   [view usage] : b.122.1.6 |PUA domain-like |PUA domain-like |ProFAR isomerase associated domain |automated matches |Pyrococcus horikoshii [TaxId: 53953]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.47,    c.56,    b.40,   d.166,   b.122