Tableau information
Concept source: d2afkh_ amino acid (a.a.) range (ALA1)(CYS38)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA1) (LYS10) E1
(THR17) (GLY30) H2
(LYS32) (CYS38) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 157.1° H2
E3 -35.9° -165.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.5° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3kwka_ : (ARG106) (ALA147) [view usage] : d.90.1.0 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 226186]
d1ft8c2 : (THR157) (SER193) [view usage] : d.58.7.2 |Ferredoxin-like |RNA-binding domain, RBD |Non-canonical RBD domain |mRNA export factor tap |Human (Homo sapiens) [TaxId: 9606]
d1p60a_ : (LYS22) (PRO52) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Deoxycytidine kinase |Human (Homo sapiens) [TaxId: 9606]
d1chda_ : (GLN244) (LEU280) [view usage] : c.40.1.1 |Methylesterase CheB, C-terminal domain |Methylesterase CheB, C-terminal domain |Methylesterase CheB, C-terminal domain |Methylesterase CheB, C-terminal domain |Salmonella typhimurium [TaxId: 90371]
d1oe0a_ : (THR22) (THR51) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Deoxyribonucleoside kinase |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1kdoa_ : (VAL7) (GLY37) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |CMP kinase |Escherichia coli [TaxId: 562]
d3ncra_ : (MET1) (ASP32) [view usage] : d.58.5.0 |Ferredoxin-like |GlnB-like |automated matches |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d1uj2a_ : (PHE21) (GLN61) [view usage] : c.37.1.6 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Phosphoribulokinase/pantothenate kinase |Uridine-cytidine kinase 2 |Human (Homo sapiens) [TaxId: 9606]
d3o9pa_ : (GLN218) (SER245) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Escherichia coli [TaxId: 562]
d2ja1a1 : (TRP9) (PRO44) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Bacillus cereus [TaxId: 1396]
d3kfxb_ : (LYS22) (PRO52) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Deoxycytidine kinase |Human (Homo sapiens) [TaxId: 9606]
d3ncqc_ : (MET1) (ASP32) [view usage] : d.58.5.0 |Ferredoxin-like |GlnB-like |automated matches |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d1yzya1 : (LEU1) (ASN29) [view usage] : c.146.1.1 |YgbK-like |YgbK-like |YgbK-like |Hypothetical protein HI1011 |Haemophilus influenzae [TaxId: 727]
d1yr8a_ : (MET1) (LEU35) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |ATP(GTP)-binding protein PAB0955 |Pyrococcus abyssi [TaxId: 29292]
d2feoa_ : (VAL7) (GLY37) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |automated matches |Escherichia coli [TaxId: 562]
d2afkh_ : (ALA1) (CYS38) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Nitrogenase iron protein |Azotobacter vinelandii [TaxId: 354]
d2gvka1 : (GLU22) (PHE70) [view usage] : d.58.4.14 |Ferredoxin-like |Dimeric alpha+beta barrel |Dyp-type peroxidase-like |Hypothetical protein BT1219 |Bacteroides thetaiotaomicron [TaxId: 818]
d2zi9a_ : (LYS22) (PRO52) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Deoxycytidine kinase |Human (Homo sapiens) [TaxId: 9606]
d3lj8a_ : (LEU211) (THR237) [view usage] : c.45.1.1 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Dual specificity phosphatase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4jjzb_ : (THR266) (GLY303) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |automated matches |Moorella thermoacetica [TaxId: 1525]
d1xd8a_ : (GLN4) (CYS38) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Nitrogenase iron protein |Azotobacter vinelandii [TaxId: 354]
d4dn2b_ : (VAL89) (GLY134) [view usage] : d.90.1.0 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |automated matches |automated matches |Geobacter metallireducens [TaxId: 269799]
d1qd1a2 : (PHE181) (GLY223) [view usage] : d.58.34.1 |Ferredoxin-like |Formiminotransferase domain of formiminotransferase-cyclodeaminase. |Formiminotransferase domain of formiminotransferase-cyclodeaminase. |Formiminotransferase domain of formiminotransferase-cyclodeaminase. |Pig (Sus scrofa) [TaxId: 9823]
d3iima_ : (MET1) (VAL34) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4jimb_ : (LYS58) (ARG97) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |automated matches |Moorella thermoacetica [TaxId: 1525]
d1k8kd2 : (ARG160) (HIS202) [view usage] : d.198.2.1 |Secretion chaperone-like |Arp2/3 complex subunits |Arp2/3 complex subunits |ARPC2 (34 kDa subunit) |Cow (Bos taurus) [TaxId: 9913]
d2haga1 : (LEU19) (ALA64) [view usage] : d.58.4.14 |Ferredoxin-like |Dimeric alpha+beta barrel |Dyp-type peroxidase-like |Melanin biosynthesis protein TyrA |Shewanella oneidensis [TaxId: 70863]
d3fwya_ : (LYS32) (CYS67) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Rhodobacter sphaeroides [TaxId: 272943]
d2ynma_ : (VAL31) (CYS65) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Prochlorococcus marinus [TaxId: 1219]
d3ncrc_ : (MET1) (ASP32) [view usage] : d.58.5.0 |Ferredoxin-like |GlnB-like |automated matches |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d3wmxa_ : (GLY173) (LEU206) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Ralstonia eutropha [TaxId: 381666]
d3qusa_ : (LYS58) (ARG97) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |automated matches |Moorella thermoacetica [TaxId: 1525]
d3ge5b_ : (PRO80) (CYS127) [view usage] : d.90.1.0 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |automated matches |automated matches |Porphyromonas gingivalis [TaxId: 242619]
d1knqa_ : (ASP7) (ASP40) [view usage] : c.37.1.17 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Gluconate kinase |Gluconate kinase |Escherichia coli [TaxId: 562]
d4dn2a_ : (PRO87) (GLY134) [view usage] : d.90.1.0 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |automated matches |automated matches |Geobacter metallireducens [TaxId: 269799]
d1iwea_ : (LYS78) (GLY99) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Adenylosuccinate synthetase, PurA |Mouse (Mus musculus) [TaxId: 10090]
d2afke_ : (ALA1) (CYS38) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Nitrogenase iron protein |Azotobacter vinelandii [TaxId: 354]
d1ctfa_ : (LEU94) (LYS120) [view usage] : d.45.1.1 |ClpS-like |ClpS-like |Ribosomal protein L7/12, C-terminal domain |Ribosomal protein L7/12, C-terminal domain |Escherichia coli [TaxId: 562]
d3iija_ : (MET1) (VAL34) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1eg7b_ : (LYS1058) (ARG1097) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Formyltetrahydrofolate synthetase |Moorella thermoacetica [TaxId: 1525]
d1g5pa_ : (GLN4) (GLY37) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Nitrogenase iron protein |Azotobacter vinelandii [TaxId: 354]
d1yrab_ : (MET498) (LEU35) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |ATP(GTP)-binding protein PAB0955 |Pyrococcus abyssi [TaxId: 29292]
d2zi3a_ : (LYS23) (PRO52) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Deoxycytidine kinase |Human (Homo sapiens) [TaxId: 9606]
d2oxra_ : (MET1) (LEU35) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |ATP(GTP)-binding protein PAB0955 |Pyrococcus abyssi [TaxId: 29292]
d1rw4a_ : (GLN4) (GLY37) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Nitrogenase iron protein |Azotobacter vinelandii [TaxId: 354]
d1de0a_ : (GLN4) (GLY37) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Nitrogenase iron protein |Azotobacter vinelandii [TaxId: 354]
d1xrja_ : (PHE21) (GLN61) [view usage] : c.37.1.6 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Phosphoribulokinase/pantothenate kinase |Uridine-cytidine kinase 2 |Human (Homo sapiens) [TaxId: 9606]
d1g1ma_ : (GLN4) (GLY37) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Nitrogenase iron protein |Azotobacter vinelandii [TaxId: 354]
d2peba_ : (GLY10) (LYS46) [view usage] : d.58.55.0 |Ferredoxin-like |DOPA-like |automated matches |automated matches |Nostoc punctiforme [TaxId: 63737]
d2kmla_ : (GLU37) (SER66) [view usage] : c.56.1.1 |Phosphorylase/hydrolase-like |HybD-like |Hydrogenase maturating endopeptidase HybD |Hydrogenase maturating endopeptidase HybD |Escherichia coli [TaxId: 562]
d1yr6a1 : (MET1) (LEU35) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |ATP(GTP)-binding protein PAB0955 |Pyrococcus abyssi [TaxId: 29292]
d2no0a_ : (LYS22) (PRO52) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Deoxycytidine kinase |Human (Homo sapiens) [TaxId: 9606]
d2fyic_ : (ARG123) (ALA148) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |LysR-type regulatory protein Cbl |Escherichia coli [TaxId: 562]
d2ynmb_ : (VAL31) (ASP66) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Prochlorococcus marinus [TaxId: 1219]
d1ft8a2 : (THR157) (SER193) [view usage] : d.58.7.2 |Ferredoxin-like |RNA-binding domain, RBD |Non-canonical RBD domain |mRNA export factor tap |Human (Homo sapiens) [TaxId: 9606]
d1dj2a_ : (LYS67) (GLY88) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Adenylosuccinate synthetase, PurA |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2iiza_ : (LEU19) (ALA64) [view usage] : d.58.4.14 |Ferredoxin-like |Dimeric alpha+beta barrel |Dyp-type peroxidase-like |Melanin biosynthesis protein TyrA |Shewanella oneidensis [TaxId: 70863]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94, c.2, d.58, c.56, c.45, c.37, d.90, d.45, d.198, c.40, c.146