Tableau information
Concept source: d1kqba_ amino acid (a.a.) range (LEU159)(GLY192)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU159) (GLU165) E1
(ASP168) (PHE176) H2
(GLY182) (GLY192) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -109.6° H2
E3 143.7° 100.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.5° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2oeja1 : (LYS47) (PRO80) [view usage] : d.58.9.0 |Ferredoxin-like |RuBisCO, large subunit, small (N-terminal) domain |automated matches |automated matches |Geobacillus kaustophilus [TaxId: 1462]
d2qi9c_ : (VAL4) (ALA25) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |ABC transporter involved in vitamin B12 uptake, BtuD |Escherichia coli [TaxId: 562]
d1bcia_ : (LYS19) (THR52) [view usage] : b.7.1.1 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |PLC-like (P variant) |Domain from cytosolic phospholipase A2 |Human (Homo sapiens) [TaxId: 9606]
d4m4ye_ : (SER116) (ASN150) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
d3hznc_ : (LEU159) (GLY192) [view usage] : d.90.1.1 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |NADH oxidase/flavin reductase |automated matches |Salmonella enterica [TaxId: 99287]
d3hznh_ : (LEU159) (GLY192) [view usage] : d.90.1.1 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |NADH oxidase/flavin reductase |automated matches |Salmonella enterica [TaxId: 99287]
d2f2fc1 : (THR64) (VAL90) [view usage] : b.42.2.1 |beta-Trefoil |Ricin B-like lectins |Ricin B-like |Cytolethal distending toxin subunit C |Actinobacillus actinomycetemcomitans [TaxId: 714]
d3dj3d_ : (GLY54) (GLN79) [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1lcya1 : (GLY257) (ALA282) [view usage] : b.36.1.4 |PDZ domain-like |PDZ domain-like |HtrA-like serine proteases |Mitochondrial serine protease HtrA2 |Human (Homo sapiens) [TaxId: 9606]
d1iw7c_ : (VAL756) (LEU790) [view usage] : e.29.1.1 |beta and beta-prime subunits of DNA dependent RNA-polymerase |beta and beta-prime subunits of DNA dependent RNA-polymerase |RNA-polymerase beta |RNA-polymerase beta |Thermus thermophilus [TaxId: 274]
d1ds7a_ : (LEU159) (GLY192) [view usage] : d.90.1.1 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |NADH oxidase/flavin reductase |Oxygen-insensitive NAD(P)H nitroreductase |Escherichia coli, minor form, NfnB [TaxId: 562]
d3pyja_ : (GLY1) (PRO40) [view usage] : d.17.1.1 |Cystatin-like |Cystatin/monellin |Monellin |Monellin, B & A chains together |Serendipity berry (Dioscoreophyllum cumminsii) [TaxId: 3457]
d3bema_ : (TRP151) (GLY183) [view usage] : d.90.1.0 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d1kqba_ : (LEU159) (GLY192) [view usage] : d.90.1.1 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |NADH oxidase/flavin reductase |Oxygen-insensitive NAD(P)H nitroreductase |Enterobacter cloacae [TaxId: 550]
d3bemb_ : (TRP151) (GLY183) [view usage] : d.90.1.0 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d1iv9a_ : (GLY1) (PRO40) [view usage] : d.17.1.1 |Cystatin-like |Cystatin/monellin |Monellin |Monellin, B & A chains together |Serendipity berry (Dioscoreophyllum cumminsii) [TaxId: 3457]
d2ahva2 : (GLN227) (PRO254) [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Putative enzyme YdiF N-terminal domain |Escherichia coli [TaxId: 562]
d1qs1a2 : (LYS401) (ASP432) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Vegetative insecticidal protein 2 (VIP2) |Bacillus cereus [TaxId: 1396]
d3hzna_ : (LEU159) (GLY192) [view usage] : d.90.1.1 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |NADH oxidase/flavin reductase |automated matches |Salmonella enterica [TaxId: 99287]
d1wkva1 : (ALA2) (GLY38) [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |O-acetylserine sulfhydrylase (Cysteine synthase) |Aeropyrum pernix [TaxId: 56636]
d1qs2a2 : (LYS401) (ASP432) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Vegetative insecticidal protein 2 (VIP2) |Bacillus cereus [TaxId: 1396]
d4m4ya_ : (SER116) (ASN150) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
d1icva_ : (LEU159) (GLY192) [view usage] : d.90.1.1 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |NADH oxidase/flavin reductase |Oxygen-insensitive NAD(P)H nitroreductase |Escherichia coli, minor form, NfnB [TaxId: 562]
d1t4fm_ : (GLN24) (THR49) [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |Human (Homo sapiens) [TaxId: 9606]
d3gp5a_ : (ASP118) (LEU152) [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Burkholderia pseudomallei [TaxId: 28450]
d2hgj21 : (PRO2) (GLU38) [view usage] : d.59.1.1 |Ribosomal protein L30p/L7e |Ribosomal protein L30p/L7e |Ribosomal protein L30p/L7e |Prokaryotic ribosomal protein L30 |Thermus thermophilus [TaxId: 274]
d3q2pa_ : (GLY1) (PRO40) [view usage] : d.17.1.1 |Cystatin-like |Cystatin/monellin |Monellin |automated matches |Serendipity berry (Dioscoreophyllum cumminsii) [TaxId: 3457]
d1icra_ : (LEU159) (GLY192) [view usage] : d.90.1.1 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |NADH oxidase/flavin reductase |Oxygen-insensitive NAD(P)H nitroreductase |Escherichia coli, minor form, NfnB [TaxId: 562]
d1ky8a_ : (ILE133) (GLY159) [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN |Thermoproteus tenax [TaxId: 2271]
d2ogga1 : (THR95) (ASP133) [view usage] : d.190.1.2 |Chorismate lyase-like |Chorismate lyase-like |UTRA domain |Trehalose operon transcriptional repressor TreR |Bacillus subtilis [TaxId: 1423]
d1r24a2 : (TYR173) (HIS198) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain kappa constant domain, CL-kappa |Mouse (Mus musculus) [TaxId: 10090]
d1mw5a_ : (PRO120) (TRP154) [view usage] : d.259.1.1 |Hypothetical protein HI1480 |Hypothetical protein HI1480 |Hypothetical protein HI1480 |Hypothetical protein HI1480 |Haemophilus influenzae [TaxId: 727]
d1sr4c_ : (THR64) (VAL90) [view usage] : b.42.2.1 |beta-Trefoil |Ricin B-like lectins |Ricin B-like |Cytolethal distending toxin subunit C |Haemophilus ducreyi [TaxId: 730]
d1m3ea1 : (GLU207) (LYS232) [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Succinate:CoA transferase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
d1kmpa_ : (ALA191) (ARG217) [view usage] : f.4.3.3 |Transmembrane beta-barrels |Porins |Ligand-gated protein channel |Outer membrane transporter FecA |Escherichia coli [TaxId: 562]
d3pv4a1 : (GLY271) (GLN296) [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Legionella fallonii [TaxId: 96230]
d1tqba_ : (GLY130) (ARG167) [view usage] : d.6.1.1 |Prion-like |Prion-like |Prion-like |Prion protein domain |Sheep (Ovis aries) [TaxId: 9940]
d1wkvb_ : (ALA2) (GLY38) [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |O-acetylserine sulfhydrylase (Cysteine synthase) |Aeropyrum pernix [TaxId: 56636]
d1nyka_ : (THR102) (SER129) [view usage] : b.33.1.1 |ISP domain |ISP domain |Rieske iron-sulfur protein (ISP) |Soluble Rieske protein |Thermus thermophilus [TaxId: 274]
d3vsca_ : (ALA2) (GLY38) [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |automated matches |Aeropyrum pernix [TaxId: 272557]
d2wrgh_ : (SER113) (ASN150) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza a virus (a/brevig mission/1/1918(h1n1)) [TaxId: 88776]
d2freb_ : (HIS131) (THR163) [view usage] : d.90.1.1 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |NADH oxidase/flavin reductase |NAD(P)H-flavin oxidoreductase Atu0013 |Agrobacterium tumefaciens [TaxId: 358]
d1hrub_ : (PRO292) (ASP320) [view usage] : d.115.1.1 |YrdC/RibB |YrdC/RibB |YrdC-like |Hypothetical protein YrdC |Escherichia coli [TaxId: 562]
d3dj1a_ : (GLY54) (GLN79) [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2f20a1 : (GLY148) (PRO176) [view usage] : d.303.1.1 |BB1717-like |BB1717-like |BB1717-like |Hypothetical protein BT1218 |Bacteroides thetaiotaomicron [TaxId: 818]
d2fgwh2 : (GLY129) (ASP155) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Human (Homo sapiens) [TaxId: 9606]
d3ge5a_ : (LEU121) (TYR154) [view usage] : d.90.1.0 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |automated matches |automated matches |Porphyromonas gingivalis [TaxId: 242619]
d1mola_ : (GLY1) (PRO40) [view usage] : d.17.1.1 |Cystatin-like |Cystatin/monellin |Monellin |Monellin, B & A chains together |Serendipity berry (Dioscoreophyllum cumminsii) [TaxId: 3457]
d4m4yc_ : (SER116) (ASN150) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
d1nnva_ : (GLY45) (GLU79) [view usage] : d.17.7.1 |Cystatin-like |Putative dsDNA mimic |Putative dsDNA mimic |Hypothetical protein HI1450 |Haemophilus influenzae [TaxId: 727]
d3vscb_ : (ALA2) (GLY38) [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |automated matches |Aeropyrum pernix [TaxId: 272557]
d2k6qa_ : (ASN76) (SER115) [view usage] : d.15.1.3 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |GABARAP-like |Microtubule-associated proteins 1A/1B light chain 3B |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1khha_ : (ILE206) (THR233) [view usage] : c.66.1.16 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Guanidinoacetate methyltransferase |Guanidinoacetate methyltransferase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1qo3d_ : (ASP193) (LYS237) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |NK cell receptor |Mouse (Mus musculus), ly49-a [TaxId: 10090]
d3waob_ : (ASN92) (SER131) [view usage] : d.15.1.3 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |GABARAP-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1noxa_ : (LEU152) (TYR185) [view usage] : d.90.1.1 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |NADH oxidase/flavin reductase |NADH oxidase |Thermus thermophilus HB8 [TaxId: 300852]
d2aj7a1 : (ILE60) (GLU101) [view usage] : b.158.1.1 |BH3618-like |BH3618-like |BH3618-like |Hypothetical protein BH3618 |Bacillus halodurans [TaxId: 86665]
d4edac_ : (SER109) (ASN147) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
d4pjtd2 : (THR799) (GLU842) [view usage] : d.166.1.0 |ADP-ribosylation |ADP-ribosylation |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2gp5a_ : (ASN137) (GLU169) [view usage] : b.82.2.14 |Double-stranded beta-helix |Clavaminate synthase-like |Histone demethylase core |JMJD2A core |Human (Homo sapiens) [TaxId: 9606]
d1ej8a_ : (GLY187) (VAL214) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |Copper chaperone for superoxide dismutase, C-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1ulta_ : (GLU385) (GLY417) [view usage] : e.23.1.1 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |Long chain fatty acid-CoA ligase TT0168 |Thermus thermophilus [TaxId: 274]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.82, b.19, d.58, c.79, c.82, c.66, c.124, f.4, c.37, d.166, d.169, c.60, b.1, e.23, b.42, d.17, d.90, d.15, b.7, a.42,
d.6, b.36, b.33, d.259, e.29, b.158, d.115, d.190, d.303, d.59