Tableau information
Concept source: d4knsa1 amino acid (a.a.) range (GLY117)(PRO144)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY117) (CYS123) E1
(PRO127) (GLY135) H2
(GLY138) (PRO144) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 109.7° H2
E3 153.7° -83.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4begb_ : (HIS79) (ASN111) [view usage] : b.17.1.0 |PEBP-like |PEBP-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d4d9ta_ : (GLY534) (LEU568) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2qvra_ : (VAL122) (TYR161) [view usage] : e.7.1.0 |Carbohydrate phosphatase |Carbohydrate phosphatase |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1as7a2 : (GLY299) (GLY324) [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Nitrite reductase, NIR |Alcaligenes faecalis, strain s-6 [TaxId: 511]
d1auua_ : (GLU19) (ARG49) [view usage] : b.35.2.1 |GroES-like |SacY-like RNA-binding domain |BglG-like antiterminator proteins |SacY |Bacillus subtilis [TaxId: 1423]
d1wfja_ : (GLU72) (LEU96) [view usage] : b.7.1.2 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |Synaptotagmin-like (S variant) |C2 domain protein At1g63220 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d3dkha1 : (GLY133) (ASN156) [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Laccase |Fungus (Melanocarpus albomyces) [TaxId: 204285]
d1qjsa2 : (PRO404) (SER428) [view usage] : b.66.1.1 |4-bladed beta-propeller |Hemopexin-like domain |Hemopexin-like domain |Hemopexin |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1gw0a1 : (GLY133) (ASN156) [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Laccase |Fungus (Melanocarpus albomyces) [TaxId: 204285]
d1qwjb_ : (SER214) (ARG239) [view usage] : c.68.1.13 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |Cytidylytransferase |CMP acylneuraminate synthetase |Mouse (Mus musculus) [TaxId: 10090]
d1k28d1 : (LEU12) (SER43) [view usage] : b.106.1.1 |Phage tail proteins |Phage tail proteins |Baseplate protein-like |Baseplate structural protein gp27 |Bacteriophage T4 [TaxId: 10665]
d2h5ua1 : (GLY104) (ASN130) [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Trametes maxima [TaxId: 259368]
d3ppsa1 : (GLY134) (ASP157) [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Thielavia arenaria [TaxId: 113610]
d2hvaa1 : (LYS96) (ARG125) [view usage] : d.60.1.4 |Probable bacterial effector-binding domain |Probable bacterial effector-binding domain |SOUL heme-binding protein |Heme-binding protein 1 |Mouse (Mus musculus) [TaxId: 10090]
d2hewf1 : (LYS149) (GLN177) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Tumor necrosis factor ligand superfamily member 4, OX40L |Mouse (Mus musculus) [TaxId: 10090]
d2qr8a_ : (GLY534) (LEU568) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4knsa1 : (GLY117) (PRO144) [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Nitrosomonas europaea [TaxId: 228410]
d4bgdc_ : (SER2299) (ASP2343) [view usage] : c.97.3.0 |Cytidine deaminase-like |JAB1/MPN domain |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2i7pa1 : (GLU159) (ASP181) [view usage] : c.55.1.14 |Ribonuclease H-like motif |Actin-like ATPase domain |Fumble-like |Pantothenate kinase 3, PANK3 |Human (Homo sapiens) [TaxId: 9606]
d3etpa_ : (GLU117) (ALA151) [view usage] : b.18.1.4 |Galactose-binding domain-like |Galactose-binding domain-like |Ephrin receptor ligand binding domain |Ligand-binding domain of the ephb2 receptor tyrosine kinase |Mouse (Mus musculus) [TaxId: 10090]
d1hlup_ : (LYS69) (THR92) [view usage] : d.110.1.1 |Profilin-like |Profilin (actin-binding protein) |Profilin (actin-binding protein) |Profilin (actin-binding protein) |Cow (Bos taurus) [TaxId: 9913]
d4elzc_ : (PRO19) (PRO42) [view usage] : b.34.6.1 |SH3-like barrel |Cell growth inhibitor/plasmid maintenance toxic component |CcdB |CcdB |Vibrio fischeri [TaxId: 668]
d1kcwa1 : (VAL156) (LYS182) [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Ceruloplasmin |Human (Homo sapiens) [TaxId: 9606]
d1ubhl_ : (ASP294) (LYS321) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |Nickel-iron hydrogenase, large subunit |Desulfovibrio vulgaris [TaxId: 881]
d2cbpa_ : (MET38) (SER63) [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Plantacyanin |Cucumber (Cucumis sativus) [TaxId: 3659]
d1m1sa_ : (LYS168) (ALA206) [view usage] : b.1.11.2 |Immunoglobulin-like beta-sandwich |PapD-like |MSP-like |WR4 |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d2wqta_ : (GLU131) (GLY168) [view usage] : d.177.1.1 |FAH |FAH |FAH |automated matches |Escherichia coli K-12 [TaxId: 83333]
d4ks6a_ : (ASP191) (PRO217) [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |Botulinum neurotoxin |Clostridium botulinum, serotype A [TaxId: 1491]
d1sddb1 : (ARG1685) (ARG1711) [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Coagulation factor V |Cow (Bos taurus) [TaxId: 9913]
d1qwja_ : (SER214) (MET238) [view usage] : c.68.1.13 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |Cytidylytransferase |CMP acylneuraminate synthetase |Mouse (Mus musculus) [TaxId: 10090]
d2heyf_ : (LYS149) (THR179) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Tumor necrosis factor ligand superfamily member 4, OX40L |Mouse (Mus musculus) [TaxId: 10090]
d1yrqh_ : (SER287) (GLY318) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |automated matches |Desulfovibrio fructosovorans [TaxId: 878]
d2ocfd_ : (GLY65) (ARG93) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1gvza_ : (ASP87) (ARG107) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Prostate specific antigen (PSA kallikrein) |Horse (Equus caballus) [TaxId: 9796]
d3nsfa1 : (ALA136) (ASP164) [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |multi-copper oxidase CueO |Escherichia coli [TaxId: 562]
d2j5wa6 : (GLY313) (GLN336) [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2or7a_ : (VAL29) (ASN51) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3c88a_ : (ASP191) (PRO217) [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |automated matches |Clostridium botulinum [TaxId: 1491]
d1vi7a1 : (GLU97) (THR137) [view usage] : d.14.1.11 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |YigZ N-terminal domain-like |Hypothetical protein YigZ, N-terminal domain |Escherichia coli [TaxId: 562]
d1j8ra_ : (ASP148) (PHE191) [view usage] : b.2.3.3 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |PapG adhesin receptor-binding domain |PapG adhesin receptor-binding domain |Escherichia coli [TaxId: 562]
d4el4a_ : (ASP191) (PRO217) [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |automated matches |Clostridium botulinum [TaxId: 1491]
d3b93a1 : (ASP146) (LEU169) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Glucocorticoid-induced TNF-related ligand, TNFSF18 |Human (Homo sapiens) [TaxId: 9606]
d4bega_ : (HIS79) (ASN111) [view usage] : b.17.1.0 |PEBP-like |PEBP-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d2r30a1 : (GLY145) (LEU169) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Glucocorticoid-induced TNF-related ligand, TNFSF18 |Human (Homo sapiens) [TaxId: 9606]
d1niaa2 : (GLY299) (GLY324) [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Nitrite reductase, NIR |Achromobacter cycloclastes [TaxId: 223]
d1kbva2 : (GLY282) (GLY307) [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Nitrite reductase, NIR |Neisseria gonorrhoeae, AniA [TaxId: 485]
d2heyg_ : (LYS149) (THR179) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Tumor necrosis factor ligand superfamily member 4, OX40L |Mouse (Mus musculus) [TaxId: 10090]
d1l1ca_ : (LYS20) (LEU50) [view usage] : b.35.2.1 |GroES-like |SacY-like RNA-binding domain |BglG-like antiterminator proteins |LicT |Bacillus subtilis [TaxId: 1423]
d1sv6a_ : (GLU131) (GLY168) [view usage] : d.177.1.1 |FAH |FAH |FAH |2-keto-4-pentenoate hydratase MhpD |Escherichia coli [TaxId: 562]
d2cala_ : (GLY1132) (LYS1155) [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |automated matches |Thiobacillus ferrooxidans [TaxId: 920]
d1wkoa_ : (THR29) (GLY61) [view usage] : b.17.1.1 |PEBP-like |PEBP-like |Phosphatidylethanolamine binding protein |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1i7da_ : (LEU45) (PRO77) [view usage] : e.10.1.1 |Prokaryotic type I DNA topoisomerase |Prokaryotic type I DNA topoisomerase |Prokaryotic type I DNA topoisomerase |DNA topoisomerase III |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.68, b.47, d.92, e.18, d.144, c.55, b.18, d.14, b.2, b.6, e.7, b.1, c.97, d.110, d.177, b.22, b.34, b.7, b.17, b.66,
b.106, e.10, d.60, b.35