Tableau information
Concept source: d1r9za2 amino acid (a.a.) range (VAL242)(PRO276)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL242) (HIS246) E1
(GLY255) (GLY269) H2
(ILE270) (PRO276) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -146.5° H2
E3 -24.0° -122.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1e9sf_ : (LYS348) (SER387) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Bacterial conjugative coupling protein TrwB |Escherichia coli [TaxId: 562]
d1e9sb_ : (LYS348) (SER387) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Bacterial conjugative coupling protein TrwB |Escherichia coli [TaxId: 562]
d1o6eb_ : (ALA4) (THR45) [view usage] : b.57.1.1 |Herpes virus serine proteinase, assemblin |Herpes virus serine proteinase, assemblin |Herpes virus serine proteinase, assemblin |Epstein-Barr virus protease |Human herpesvirus 4 [TaxId: 10376]
d1p1da1 : (GLY70) (PHE113) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Glutamate receptor interacting protein |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2p3ma1 : (VAL2) (LYS47) [view usage] : b.43.5.2 |Reductase/isomerase/elongation factor common domain |Riboflavin kinase-like |CTP-dependent riboflavin kinase-like |CTP-dependent riboflavin kinase, Rfk |Methanococcus jannaschii [TaxId: 2190]
d1cjca1 : (LYS190) (ASP224) [view usage] : c.3.1.1 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |C-terminal domain of adrenodoxin reductase-like |Adrenodoxin reductase of mitochondrial p450 systems |Cow (Bos taurus) [TaxId: 9913]
d1siza_ : (ALA1) (VAL37) [view usage] : d.58.1.4 |Ferredoxin-like |4Fe-4S ferredoxins |Single 4Fe-4S cluster ferredoxin |Fe3S4-ferredoxin PF1909 |Pyrococcus furiosus [TaxId: 2261]
d3lupa_ : (LYS2) (ILE31) [view usage] : c.119.1.0 |DAK1/DegV-like |DAK1/DegV-like |automated matches |automated matches |Streptococcus agalactiae [TaxId: 208435]
d1rdxa_ : (GLY259) (THR297) [view usage] : e.7.1.1 |Carbohydrate phosphatase |Carbohydrate phosphatase |Inositol monophosphatase/fructose-1,6-bisphosphatase-like |Fructose-1,6-bisphosphatase |Pig (Sus scrofa) [TaxId: 9823]
d1b9na4 : (GLN227) (ASN252) [view usage] : b.40.6.2 |OB-fold |MOP-like |BiMOP, duplicated molybdate-binding domain |C-terminal domain of molybdate-dependent transcriptional regulator ModE |Escherichia coli [TaxId: 562]
d2mp0b_ : (THR319) (PRO354) [view usage] : b.84.3.1 |Barrel-sandwich hybrid |Duplicated hybrid motif |Glucose permease-like |Glucose-specific factor III (glsIII) |Escherichia coli [TaxId: 562]
d1wmda2 : (GLY23) (ALA55) [view usage] : c.41.1.1 |Subtilisin-like |Subtilisin-like |Subtilases |Alkaline serine protease kp-43, N-terminal domain |Bacillus sp. KSM-KP43 [TaxId: 109322]
d4ks6a_ : (ASN150) (ASP191) [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |Botulinum neurotoxin |Clostridium botulinum, serotype A [TaxId: 1491]
d4czea1 : (GLY46) (ARG72) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Caulobacter vibrioides [TaxId: 155892]
d1p85j_ : (PRO119) (GLU143) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |70S ribosome functional complex |Escherichia coli [TaxId: 562]
d3hjea1 : (ILE123) (ASP177) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
d3be7a2 : (ASP239) (ASP265) [view usage] : c.1.9.18 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Zn-dependent arginine carboxypeptidase-like |Zn-dependent arginine carboxypeptidase |Unidentified organism [TaxId: 32644]
d1qzfa1 : (ASN47) (SER76) [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, DFR domain |Cryptosporidium hominis [TaxId: 237895]
d1i24a_ : (GLY210) (ASP233) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Sulfolipid biosynthesis protein SQD1 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1r64a2 : (ASP267) (ALA311) [view usage] : c.41.1.1 |Subtilisin-like |Subtilisin-like |Subtilases |Kexin, N-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1dfji_ : (GLU425) (SER456) [view usage] : c.10.1.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |28-residue LRR |Ribonuclease inhibitor |Pig (Sus scrofa) [TaxId: 9823]
d1vkma_ : (GLU110) (SER143) [view usage] : c.138.1.1 |Indigoidine synthase A-like |Indigoidine synthase A-like |Indigoidine synthase A-like |Hypothetical protein TM1464 |Thermotoga maritima [TaxId: 2336]
d1gzhd2 : (ASP1918) (GLN1944) [view usage] : c.15.1.4 |BRCT domain |BRCT domain |53BP1 |53BP1 |Human (Homo sapiens) [TaxId: 9606]
d1qrra_ : (GLY210) (ASP233) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Sulfolipid biosynthesis protein SQD1 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1i2ba_ : (GLY210) (ASP233) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Sulfolipid biosynthesis protein SQD1 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.10, c.2, d.58, i.1, d.92, b.40, c.37, c.55, c.71, e.7, c.41, b.84, c.3, b.43, c.119, c.15, b.36, c.138, b.57