Protein Concepts Dictionary

Tableau information

Concept source:  d2bela_  amino acid (a.a.) range (LYS36)(ARG66)

nSSEs in this Concept: 3

String of secondary struct.elems. (SSEs) defining this concept: EHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LYS36)   (GLY41) E1
	   (ILE46)   (GLY58) H2
	   (HIS60)   (ARG66) E3

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                   
H2     -159.8°   H2            
E3      -21.2° -163.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.0°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1mwoa2 :   (ALA281)  (ARG315)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Bacterial alpha-amylase |Pyrococcus woesei [TaxId: 2262]
 d3ckya1 :     (ILE5)   (LEU35)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Eubacterium barkeri [TaxId: 1528]
 d1f4pa_ :     (PRO2)   (ASP37)   [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |Flavodoxin |Desulfovibrio vulgaris [TaxId: 881]
 d2d2zb1 :    (ASP14)   (THR56)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3he8a_ :     (LYS2)   (PHE32)   [view usage] : c.121.1.1 |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |automated matches |Clostridium thermocellum [TaxId: 203119]
 d2dg2a_ :    (VAL81)  (PRO113)   [view usage] : c.104.1.0 |YjeF N-terminal domain-like |YjeF N-terminal domain-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d2dg2a_ :   (ASP206)  (GLY230)   [view usage] : c.104.1.0 |YjeF N-terminal domain-like |YjeF N-terminal domain-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1egoa_ :     (MET1)   (TYR35)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Glutaredoxin (Grx, thioltransferase) |Escherichia coli [TaxId: 562]
 d4nbta_ :     (LYS7)   (ASP37)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Acholeplasma laidlawii [TaxId: 441768]
 d1bu5a_ :     (PRO2)   (ASP37)   [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |Flavodoxin |Desulfovibrio vulgaris [TaxId: 881]
 d3ckyc1 :     (ILE5)   (LEU35)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Eubacterium barkeri [TaxId: 1528]
 d2c54a1 :    (ILE30)   (TRP59)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |GDP-mannose-3', 5'-epimerase |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d1q6ya_ :    (ILE10)   (ARG40)   [view usage] : c.123.1.1 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |Hypothetical protein YfdW |Escherichia coli [TaxId: 562]
 d4hwka_ :     (VAL6)   (ALA38)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Sepiapterin reductase |Human (Homo sapiens) [TaxId: 9606]
 d1ndha2 :   (LYS144)  (GLN182)   [view usage] : c.25.1.1 |Ferredoxin reductase-like, C-terminal NADP-linked domain |Ferredoxin reductase-like, C-terminal NADP-linked domain |Reductases |cytochrome b5 reductase |Pig (Sus scrofa), liver [TaxId: 9823]
 d3a9ra1 :   (PRO109)  (GLY145)   [view usage] : c.85.1.0 |FucI/AraA N-terminal and middle domains |FucI/AraA N-terminal and middle domains |automated matches |automated matches |Geobacillus pallidus [TaxId: 33936]
 d1itwa_ :     (PRO4)   (THR39)   [view usage] : c.77.1.2 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Monomeric isocitrate dehydrogenase |Monomeric isocitrate dehydrogenase |Azotobacter vinelandii [TaxId: 354]
 d1glva1 :     (MET1)   (GLU39)   [view usage] : c.30.1.3 |PreATP-grasp domain |PreATP-grasp domain |Prokaryotic glutathione synthetase, N-terminal domain |Prokaryotic glutathione synthetase, N-terminal domain |Escherichia coli [TaxId: 562]
 d2uyya1 :   (LYS269)  (ARG298)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2d2zc1 :    (LEU18)   (ASP58)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2nvua_ :    (ALA31)   (ASP61)   [view usage] : c.111.1.2 |Activating enzymes of the ubiquitin-like proteins |Activating enzymes of the ubiquitin-like proteins |Ubiquitin activating enzymes (UBA) |Amyloid beta precursor protein-binding protein 1, APPBP1 |Human (Homo sapiens) [TaxId: 9606]
 d2ydxa_ :    (ARG29)   (PHE60)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1s1hb_ :    (GLU70)   (GLY99)   [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d4hcda2 :   (MSE304)  (LEU332)   [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
 d3uxya_ :     (LYS7)   (ARG38)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Rhodobacter sphaeroides [TaxId: 272943]
 d3zzfb_ :   (ALA100)  (GLY137)   [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3vd5a3 :   (TYR538)  (ASP569)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |beta-Galactosidase, domain 3 |Escherichia coli [TaxId: 562]
 d1i1oa_ :     (ALA2)   (ASP37)   [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |Flavodoxin |Desulfovibrio vulgaris [TaxId: 881]
 d3cync_ :    (VAL69)  (PRO107)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1fjgb_ :   (ASP160)  (LEU187)   [view usage] : c.23.15.1 |Flavodoxin-like |Ribosomal protein S2 |Ribosomal protein S2 |Ribosomal protein S2 |Thermus thermophilus [TaxId: 274]
 d3qgua_ :   (ASP211)  (ALA249)   [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d3u5eo_ :     (PRO5)   (ARG37)   [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
 d1a1sa1 :    (LYS46)   (ASN78)   [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Ornithine transcarbamoylase |Pyrococcus furiosus [TaxId: 2261]
 d1ydge_ :     (LYS6)   (LYS40)   [view usage] : c.23.5.8 |Flavodoxin-like |Flavoproteins |WrbA-like |Trp repressor binding protein WrbA |Deinococcus radiodurans [TaxId: 1299]
 d4eg0a1 :    (GLY10)   (ASP48)   [view usage] : c.30.1.0 |PreATP-grasp domain |PreATP-grasp domain |automated matches |automated matches |Burkholderia ambifaria [TaxId: 398577]
 d1hnaa2 :     (MET2)   (THR33)   [view usage] : c.47.1.5 |Thioredoxin fold |Thioredoxin-like |Glutathione S-transferase (GST), N-terminal domain |Class mu GST |Human (Homo sapiens) [TaxId: 9606]
 d4c21b1 :   (PRO102)  (GLY138)   [view usage] : c.85.1.0 |FucI/AraA N-terminal and middle domains |FucI/AraA N-terminal and middle domains |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 170187]
 d2azxa1 :   (ILE303)  (THR338)   [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Tryptophanyl-tRNA synthetase (TrpRS) |Human (Homo sapiens) [TaxId: 9606]
 d2vg1a_ :   (SER119)  (ALA155)   [view usage] : c.101.1.0 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d2b0ta_ :     (ALA2)   (THR37)   [view usage] : c.77.1.2 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Monomeric isocitrate dehydrogenase |automated matches |Corynebacterium glutamicum [TaxId: 1718]
 d1nawa_ :   (ARG150)  (ASN184)   [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |UDP-N-acetylglucosamine enolpyruvyl transferase (EPT, MurA, MurZ) |Enterobacter cloacae [TaxId: 550]
 d3fpka2 :   (HIS208)  (TRP248)   [view usage] : c.25.1.1 |Ferredoxin reductase-like, C-terminal NADP-linked domain |Ferredoxin reductase-like, C-terminal NADP-linked domain |Reductases |automated matches |Salmonella typhimurium [TaxId: 99287]
 d2vx4a_ :   (ALA112)  (TRP155)   [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]
 d2bufh_ :    (LYS28)   (GLY69)   [view usage] : c.73.1.2 |Carbamate kinase-like |Carbamate kinase-like |N-acetyl-l-glutamate kinase |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d3cpjg1 :    (ASP11)   (LYS40)   [view usage] : c.3.1.3 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |GDI-like N domain |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1qyca_ :     (SER5)   (ARG36)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Phenylcoumaran benzylic ether reductase |Loblolly pine (Pinus taeda) [TaxId: 3352]
 d2ofpa2 :     (LYS2)   (ARG31)   [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Ketopantoate reductase PanE |Escherichia coli [TaxId: 562]
 d2fexa1 :     (MSE1)   (PRO37)   [view usage] : c.23.16.2 |Flavodoxin-like |Class I glutamine amidotransferase-like |DJ-1/PfpI |Hypothetical protein Atu0886 |Agrobacterium tumefaciens [TaxId: 358]
 d2y42b_ :     (LYS2)   (VAL38)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Thermus thermophilus [TaxId: 274]
 d3zzfd_ :   (ALA100)  (GLY137)   [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3tvuc1 :  (PHE1582) (ALA1622)   [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
 d2ggta_ :   (TRP159)  (ASP204)   [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Thioredoxin-like protein Sco1 (YpmQ), soluble domain |Human (Homo sapiens) [TaxId: 9606]
 d4asie1 :  (GLU1710) (SER1754)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3ubmc_ :    (ILE14)   (ARG44)   [view usage] : c.123.1.0 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |automated matches |automated matches |Acetobacter aceti [TaxId: 435]
 d2hk7a2 :   (ASP208)  (LEU236)   [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Shikimate 5-dehydrogenase AroE |Aquifex aeolicus [TaxId: 63363]
 d1dgqa_ :   (ASN129)  (GLN172)   [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |Integrin CD11a/CD18 (Leukocyte function associated antigen-1, LFA-1) |Human (Homo sapiens) [TaxId: 9606]
 d3d0za1 :     (PRO3)   (GLU34)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Schistosoma japonicum [TaxId: 6182]
 d1ztpc_ :    (LEU38)   (GLN84)   [view usage] : d.86.1.2 |eIF4e-like |eIF4e-like |BLES03-like |Basophilic leukemia expressed protein BLES03 |Human (Homo sapiens) [TaxId: 9606]
 d3ru8x_ :    (THR39)   (GLY74)   [view usage] : c.6.1.1 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |Glycosyl hydrolases family 6, cellulases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1x0ua1 :    (ARG92)  (ASN134)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
 d2ggtb_ :   (LEU161)  (ASP204)   [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Thioredoxin-like protein Sco1 (YpmQ), soluble domain |Human (Homo sapiens) [TaxId: 9606]
 d1d5ta1 :     (ASP6)   (ARG35)   [view usage] : c.3.1.3 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |GDI-like N domain |Guanine nucleotide dissociation inhibitor, GDI |Cow (Bos taurus) [TaxId: 9913]
 d1m9wa_ :     (ALA1)   (ASN33)   [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Plastocyanin |Synechocystis sp. PCC 6803 [TaxId: 1148]
 d4nf0d_ :    (VAL30)   (ASN69)   [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
 d1aaza_ :     (PHE2)   (MET37)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Glutaredoxin (Grx, thioltransferase) |Bacteriophage T4 [TaxId: 10665]
 d4c22b1 :   (PRO102)  (GLY138)   [view usage] : c.85.1.0 |FucI/AraA N-terminal and middle domains |FucI/AraA N-terminal and middle domains |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 170187]
 d2bisb_ :     (LYS2)   (THR40)   [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |automated matches |Pyrococcus abyssi [TaxId: 29292]
 d2bisb_ :   (ASP122)  (HIS151)   [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |automated matches |Pyrococcus abyssi [TaxId: 29292]
 d4nbra_ :   (GLY151)  (ARG204)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Brucella abortus [TaxId: 262698]
 d1nm3a1 :   (SER171)  (ILE201)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |C-terminal, Grx domain of Hybrid-Prx5 |Haemophilus influenzae [TaxId: 727]
 d2cvza2 :     (GLU2)   (ARG31)   [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Hydroxyisobutyrate dehydrogenase |Thermus thermophilus [TaxId: 274]
 d4eh1b2 :   (GLY144)  (TYR178)   [view usage] : c.25.1.0 |Ferredoxin reductase-like, C-terminal NADP-linked domain |Ferredoxin reductase-like, C-terminal NADP-linked domain |automated matches |automated matches |Vibrio cholerae [TaxId: 243277]
 d2piaa2 :   (PHE114)  (THR147)   [view usage] : c.25.1.2 |Ferredoxin reductase-like, C-terminal NADP-linked domain |Ferredoxin reductase-like, C-terminal NADP-linked domain |Aromatic dioxygenase reductase-like |Phthalate dioxygenase reductase |Pseudomonas cepacia, db01 [TaxId: 292]
 d3zzfa_ :   (ALA100)  (GLY137)   [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1keua_ :   (PHE126)  (CYS194)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |dTDP-glucose 4,6-dehydratase (RmlB) |Streptococcus suis, serotype 2 [TaxId: 1307]
 d2qw8a_ :     (SER8)   (ARG39)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Ocimum basilicum [TaxId: 39350]
 d2oysa_ :     (LYS3)   (PRO41)   [view usage] : c.23.5.5 |Flavodoxin-like |Flavoproteins |Hypothetical protein SP1951 |automated matches |Streptococcus pneumoniae [TaxId: 170187]
 d1i3cb_ :    (ASN63)   (THR98)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |Response regulator for cyanobacterial phytochrome |Synechocystis sp. PCC 6803, RCP1 [TaxId: 1148]
 d2p97a1 :    (VAL57)   (PRO84)   [view usage] : d.157.1.12 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Ava3068-like |Hypothetical protein Ava3068 |Anabaena variabilis [TaxId: 1172]
 d2r2ga_ :     (SER8)   (ARG39)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Ocimum basilicum [TaxId: 39350]
 d1ynia1 :   (VAL125)  (SER163)   [view usage] : d.126.1.7 |Pentein, beta/alpha-propeller |Pentein |Succinylarginine dihydrolase-like |Succinylarginine dihydrolase |Escherichia coli [TaxId: 562]
 d4pzka_ :     (GLY2)   (ARG34)   [view usage] : c.116.1.0 |alpha/beta knot |alpha/beta knot |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
 d3prld_ :   (ASP233)  (GLU259)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Bacillus halodurans [TaxId: 86665]
 d2remb_ :    (ILE28)   (GLY69)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Xylella fastidiosa [TaxId: 2371]
 d1wp0a1 :   (LEU161)  (ASP204)   [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Thioredoxin-like protein Sco1 (YpmQ), soluble domain |Human (Homo sapiens) [TaxId: 9606]
 d2isba_ :     (VAL2)   (GLY29)   [view usage] : c.8.9.1 |The "swivelling" beta/beta/alpha domain |FumA C-terminal domain-like |FumA C-terminal domain-like |Fumarate hydratase class I beta subunit |Archaeoglobus fulgidus [TaxId: 2234]
 d1vi5d_ :   (GLU116)  (LEU143)   [view usage] : c.23.15.1 |Flavodoxin-like |Ribosomal protein S2 |Ribosomal protein S2 |Ribosomal protein S2 |Archaeoglobus fulgidus [TaxId: 2234]
 d1xhca1 :     (SER1)   (LYS30)   [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |NADH oxidase /nitrite reductase |Pyrococcus furiosus [TaxId: 2261]
 d1ks9a2 :     (MET1)   (ARG31)   [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Ketopantoate reductase PanE |Escherichia coli [TaxId: 562]
 d1pd212 :     (ASN3)   (GLU35)   [view usage] : c.47.1.5 |Thioredoxin fold |Thioredoxin-like |Glutathione S-transferase (GST), N-terminal domain |Class sigma GST |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3ivca_ :   (ASP153)  (GLU189)   [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Mycobacterium tuberculosis [TaxId: 1773]
 d2otca1 :    (ASN46)   (GLY77)   [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Ornithine transcarbamoylase |Escherichia coli [TaxId: 562]
 d4dika2 :   (LYS255)  (PHE290)   [view usage] : c.23.5.0 |Flavodoxin-like |Flavoproteins |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
 d1vs5b1 :   (ASP158)  (ILE185)   [view usage] : c.23.15.1 |Flavodoxin-like |Ribosomal protein S2 |Ribosomal protein S2 |Ribosomal protein S2 |Escherichia coli [TaxId: 562]
 d3w6ua1 :     (ARG2)   (ARG31)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Pyrobaculum calidifontis [TaxId: 410359]
 d3j39o_ :     (ARG7)   (ARG39)   [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Drosophila melanogaster [TaxId: 7227]
 d1pn3a_ :     (MET1)   (MET33)   [view usage] : c.87.1.5 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Gtf glycosyltransferase |TDP-epi-vancosaminyltransferase GtfA |Amycolatopsis orientalis [TaxId: 31958]
 d2vjoa_ :     (GLY7)   (ARG38)   [view usage] : c.123.1.1 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |automated matches |Oxalobacter formigenes [TaxId: 847]
 d1g7oa2 :     (MET1)   (LEU32)   [view usage] : c.47.1.5 |Thioredoxin fold |Thioredoxin-like |Glutathione S-transferase (GST), N-terminal domain |Glutaredoxin 2 |Escherichia coli [TaxId: 562]
 d2yy7a_ :     (LYS4)   (ILE36)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Flavobacterium frigidimaris [TaxId: 262320]
 d3bbol1 :   (LYS113)  (ASN157)   [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, chloroplast (70S ribosome functional complex) |Spinach (Spinacia oleracea) [TaxId: 3562]
 d3fuua_ :   (GLY111)  (LEU142)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d4o98a_ :   (ASP133)  (PRO165)   [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas oleovorans [TaxId: 301]
 d3c3xa_ :     (LYS9)   (ARG39)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Ocimum basilicum [TaxId: 39350]
 d1vpda2 :     (MSE3)   (ARG33)   [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Hydroxyisobutyrate dehydrogenase |Salmonella typhimurium [TaxId: 90371]
 d1itwc_ :     (PRO4)   (THR39)   [view usage] : c.77.1.2 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Monomeric isocitrate dehydrogenase |Monomeric isocitrate dehydrogenase |Azotobacter vinelandii [TaxId: 354]
 d3w6za1 :     (ARG2)   (ARG31)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Pyrobaculum calidifontis [TaxId: 410359]
 d1kqfa2 :   (SER160)  (GLN192)   [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase N, alpha subunit |Escherichia coli [TaxId: 562]
 d1vmea1 :   (LYS255)  (PHE290)   [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |ROO-like flavoprotein TM0755, C-terminal domain |Thermotoga maritima [TaxId: 2336]
 d4iqfa1 :     (LYS3)   (GLN33)   [view usage] : c.65.1.0 |Formyltransferase |Formyltransferase |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
 d1e4ea1 :     (LYS5)   (THR44)   [view usage] : c.30.1.2 |PreATP-grasp domain |PreATP-grasp domain |D-Alanine ligase N-terminal domain |D-alanine:D-lactate ligase VanA, N-domain |Enterococcus faecium [TaxId: 1352]
 d1yrhf_ :     (LYS6)   (LYS40)   [view usage] : c.23.5.8 |Flavodoxin-like |Flavoproteins |WrbA-like |Trp repressor binding protein WrbA |Deinococcus radiodurans [TaxId: 1299]
 d1pt5a_ :     (ILE8)   (ARG38)   [view usage] : c.123.1.1 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |Hypothetical protein YfdW |Escherichia coli [TaxId: 562]
 d1t4ca_ :     (GLY7)   (ARG38)   [view usage] : c.123.1.1 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |Formyl-CoA transferase |Oxalobacter formigenes [TaxId: 847]
 d1ukvg1 :    (ASP11)   (LYS40)   [view usage] : c.3.1.3 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |GDI-like N domain |Guanine nucleotide dissociation inhibitor, GDI |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1bgla5 :   (TYR538)  (ASP569)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |beta-Galactosidase, domain 3 |Escherichia coli [TaxId: 562]
 d3ur8a_ :   (SER260)  (ALA306)   [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Potato (Solanum tuberosum) [TaxId: 4113]
 d2y8ua_ :    (ASN40)   (GLY74)   [view usage] : c.6.2.0 |7-stranded beta/alpha barrel |Glycoside hydrolase/deacetylase |automated matches |automated matches |Emericella nidulans [TaxId: 162425]
 d1eesa_ :    (LEU79)  (GLY114)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |CDC42 |Human (Homo sapiens) [TaxId: 9606]
 d2pbla1 :   (LYS205)  (PHE237)   [view usage] : c.69.1.2 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase |Uncharacterized protein TM1040_2492 |Silicibacter sp. tm1040 [TaxId: 292414]
 d3froa_ :     (LYS2)   (GLY44)   [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |automated matches |Pyrococcus abyssi [TaxId: 29292]
 d3froa_ :   (ASP122)  (ILE150)   [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |automated matches |Pyrococcus abyssi [TaxId: 29292]
 d2wgra_ :    (VAL33)   (PHE70)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Blood fluke (Schistosoma mansoni) [TaxId: 6183]
 d3g68a_ :    (LYS35)   (TYR67)   [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
 d1pt8a_ :     (GLY7)   (ARG38)   [view usage] : c.123.1.1 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |Hypothetical protein YfdW |Escherichia coli [TaxId: 562]
 d1i24a_ :     (SER2)   (ASP32)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Sulfolipid biosynthesis protein SQD1 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d3exfc_ :   (PRO221)  (GLN256)   [view usage] : c.36.1.11 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase PP module |E1-beta subunit of pyruvate dehydrogenase (PP module) |Human (Homo sapiens) [TaxId: 9606]
 d3cphh1 :    (VAL12)   (LYS40)   [view usage] : c.3.1.3 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |GDI-like N domain |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1x2gc2 :     (THR2)   (ASP41)   [view usage] : d.104.1.3 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |LplA-like |Two-domain LplA, N-terminal domain |Escherichia coli [TaxId: 562]
 d1rkqa_ :   (THR114)  (PHE140)   [view usage] : c.108.1.10 |HAD-like |HAD-like |Predicted hydrolases Cof |Hypothetical protein YidA |Escherichia coli [TaxId: 562]
 d1x0va1 :     (LYS5)   (PHE41)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2y70a_ :    (PRO24)   (SER64)   [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
 d3fcya_ :   (VAL176)  (GLU204)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Thermoanaerobacterium sp. [TaxId: 60708]
 d3uxyb_ :     (LYS7)   (ARG38)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Rhodobacter sphaeroides [TaxId: 272943]
 d2cb0a_ :    (ARG33)   (PRO64)   [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Pyrococcus furiosus [TaxId: 2261]
 d4b6gb_ :   (GLN211)  (LYS250)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Neisseria meningitidis [TaxId: 122586]
 d3ufxa1 :    (PRO90)  (GLY120)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Thermus aquaticus [TaxId: 271]
 d2v4mc_ :   (ASP433)  (THR465)   [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4iqfb1 :     (LYS3)   (GLN33)   [view usage] : c.65.1.0 |Formyltransferase |Formyltransferase |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
 d1aw9a2 :     (ALA2)   (PRO33)   [view usage] : c.47.1.5 |Thioredoxin fold |Thioredoxin-like |Glutathione S-transferase (GST), N-terminal domain |Class phi GST |Maize (Zea mays), type III [TaxId: 4577]
 d1c7ea_ :     (PRO2)   (ASP37)   [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |Flavodoxin |Desulfovibrio vulgaris [TaxId: 881]
 d4iq1c1 :     (MET1)   (ALA33)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Mannheimia haemolytica [TaxId: 272629]
 d3crta1 :     (PRO3)   (GLU34)   [view usage] : c.47.1.5 |Thioredoxin fold |Thioredoxin-like |Glutathione S-transferase (GST), N-terminal domain |Class alpha GST |Schistosoma japonicum [TaxId: 6182]
 d1jyna5 :   (TYR538)  (ASP569)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |beta-Galactosidase, domain 3 |Escherichia coli [TaxId: 562]
 d4cf6a_ :     (ARG4)   (ASP41)   [view usage] : c.23.5.3 |Flavodoxin-like |Flavoproteins |Quinone reductase |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3thab_ :    (ASN11)   (VAL46)   [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
 d4nf0f_ :    (VAL30)   (PRO68)   [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
 d1rvka1 :   (MSE304)  (LEU332)   [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |Hypothetical protein Atu3453 |Agrobacterium tumefaciens [TaxId: 358]
 d4c20a1 :   (PRO102)  (GLY138)   [view usage] : c.85.1.0 |FucI/AraA N-terminal and middle domains |FucI/AraA N-terminal and middle domains |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 170187]
 d1a4ua_ :   (GLY131)  (ILE183)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Drosophila alcohol dehydrogenase |Fly (Drosophila lebanonensis) [TaxId: 7225]
 d2rm5a_ :    (SER36)   (PHE74)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
 d1tgla_ :   (LYS137)  (GLY175)   [view usage] : c.69.1.17 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Fungal lipases |Triacylglycerol lipase |Rhizomucor miehei [TaxId: 4839]
 d2bexa_ :   (GLU429)  (ILE459)   [view usage] : c.10.1.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |28-residue LRR |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1qrra_ :     (LYS2)   (ASN33)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Sulfolipid biosynthesis protein SQD1 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d2pblb_ :   (LYS205)  (PHE237)   [view usage] : c.69.1.2 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase |Uncharacterized protein TM1040_2492 |Silicibacter sp. tm1040 [TaxId: 292414]
 d1i2ba_ :     (SER2)   (ASN33)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Sulfolipid biosynthesis protein SQD1 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d2gtia1 :   (ASN114)  (THR139)   [view usage] : c.66.1.48 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Nsp15 N-terminal domain-like |Nsp15 |Murine hepatitis virus, MHV [TaxId: 11138]
 d2gtha1 :   (ASN114)  (THR139)   [view usage] : c.66.1.48 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Nsp15 N-terminal domain-like |Nsp15 |Murine hepatitis virus, MHV [TaxId: 11138]
 d3rpna_ :     (ARG6)   (PRO41)   [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3n2na_ :    (GLY42)   (SER86)   [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3gtub2 :     (MET6)   (GLY39)   [view usage] : c.47.1.5 |Thioredoxin fold |Thioredoxin-like |Glutathione S-transferase (GST), N-terminal domain |Class mu GST |Human (Homo sapiens) [TaxId: 9606]
 d2bisa1 :     (MET1)   (THR40)   [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |Glycogen synthase 1, GlgA |Pyrococcus abyssi [TaxId: 29292]
 d2bisa1 :   (ASP122)  (ILE150)   [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |Glycogen synthase 1, GlgA |Pyrococcus abyssi [TaxId: 29292]
 d4im7a1 :    (ARG24)   (ILE61)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Escherichia coli [TaxId: 199310]
 d1gz5a_ :     (ARG2)   (GLY40)   [view usage] : c.87.1.6 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Trehalose-6-phosphate synthase, OtsA |Trehalose-6-phosphate synthase, OtsA |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1,    c.10,   c.123,    c.67,    c.69,    c.81,    c.94,    d.68,     c.2,     c.6,     i.1,   c.108,    c.82,    c.26,   d.157,    c.66,    c.80,    c.77,    c.14,    c.23,  
c.37, c.36, d.104, c.47, c.104, c.87, c.85, c.62, b.6, d.126, c.78, c.73, c.8, c.101, c.25, c.116, c.121, c.111, c.3, c.65,
c.30, d.86