Tableau information
Concept source: d4dika2 amino acid (a.a.) range (ALA310)(GLY347)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA310) (GLU319) E1
(PRO324) (ASP335) H2
(LYS341) (GLY347) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -144.4° H2
E3 -25.0° -166.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1s2ha_ : (LEU97) (ASP158) [view usage] : d.135.1.1 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |Human (Homo sapiens) [TaxId: 9606]
d1o64a_ : (LEU2) (SER31) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain |Thermotoga maritima [TaxId: 2336]
d3kzha_ : (SER63) (GLU92) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Clostridium perfringens [TaxId: 1502]
d2fp4a1 : (LYS17) (PRO48) [view usage] : c.2.1.8 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |CoA-binding domain |Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain |Pig (Sus scrofa) [TaxId: 9823]
d3heib_ : (ILE68) (PHE108) [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1jroa4 : (ALA199) (SER226) [view usage] : d.145.1.3 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CO dehydrogenase flavoprotein N-terminal domain-like |Xanthine dehydrogenase chain A, domain 3 |Rhodobacter capsulatus [TaxId: 1061]
d1p8qa_ : (PRO226) (MET276) [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |Arginase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1woga_ : (ASN223) (VAL273) [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |Agmatinase |Deinococcus radiodurans [TaxId: 1299]
d1qdsa_ : (GLN5) (THR44) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Trypanosome (Leishmania mexicana) [TaxId: 5665]
d3thaa_ : (THR143) (GLY172) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d3qasa_ : (ASN104) (ALA143) [view usage] : c.101.1.1 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2y7kd_ : (VAL197) (PRO227) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Burkholderia sp. [TaxId: 233098]
d4f0ba1 : (PRO8) (SER44) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Basidomycetes fungus (Phanerochaete chrysosporium) [TaxId: 5306]
d2ow8l1 : (ASP81) (VAL114) [view usage] : c.55.4.1 |Ribonuclease H-like motif |Translational machinery components |Ribosomal protein L18 and S11 |Ribosomal protein S11 |Thermus thermophilus [TaxId: 274]
d1usyg_ : (MET1) (SER31) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain |Thermotoga maritima [TaxId: 2336]
d1p8ra_ : (PRO226) (ILE275) [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |Arginase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3bb6d_ : (ASN7) (VAL45) [view usage] : b.82.2.13 |Double-stranded beta-helix |Clavaminate synthase-like |TehB-like |Uncharacterized protein YeaR |Escherichia coli [TaxId: 562]
d2w9ta_ : (HIS88) (GLY115) [view usage] : c.71.1.0 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
d3vlna1 : (GLY22) (ASN55) [view usage] : c.47.1.5 |Thioredoxin fold |Thioredoxin-like |Glutathione S-transferase (GST), N-terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ezra_ : (THR120) (GLY153) [view usage] : c.70.1.1 |Nucleoside hydrolase |Nucleoside hydrolase |Nucleoside hydrolase |Nucleoside hydrolase |Leishmania major [TaxId: 5664]
d2p90b_ : (THR151) (ARG172) [view usage] : c.56.8.1 |Phosphorylase/hydrolase-like |Cgl1923-like |Cgl1923-like |Hypothetical protein Cgl1923 |Corynebacterium glutamicum [TaxId: 1718]
d1if2a_ : (PRO4) (THR44) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Trypanosome (Leishmania mexicana) [TaxId: 5665]
d1z6aa3 : (LYS557) (THR590) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |automated matches |Sulfolobus solfataricus [TaxId: 273057]
d1xhca1 : (ASP95) (GLY259) [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |NADH oxidase /nitrite reductase |Pyrococcus furiosus [TaxId: 2261]
d4io4b_ : (ILE133) (SER161) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Adineta vaga [TaxId: 104782]
d2e99a_ : (ARG106) (ASN144) [view usage] : c.101.1.1 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |automated matches |Escherichia coli [TaxId: 562]
d3cddb2 : (GLY31) (ILE65) [view usage] : b.106.1.1 |Phage tail proteins |Phage tail proteins |Baseplate protein-like |Baseplate protein gpP |Shewanella oneidensis [TaxId: 70863]
d1o63a_ : (LEU2) (SER31) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain |Thermotoga maritima [TaxId: 2336]
d1b5tb_ : (GLN22) (GLY61) [view usage] : c.1.23.1 |TIM beta/alpha-barrel |FAD-linked oxidoreductase |Methylenetetrahydrofolate reductase |Methylenetetrahydrofolate reductase |Escherichia coli [TaxId: 562]
d2g18d_ : (GLY108) (PRO149) [view usage] : d.248.2.1 |Coproporphyrinogen III oxidase |Ferredoxin-dependent bilin reductase |Ferredoxin-dependent bilin reductase |automated matches |Anabaena sp. [TaxId: 1167]
d2e98a_ : (ARG106) (ASN144) [view usage] : c.101.1.1 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |automated matches |Escherichia coli [TaxId: 562]
d1aiva2 : (ASP390) (ASP416) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Ovotransferrin |Chicken (Gallus gallus) [TaxId: 9031]
d1yhja_ : (ARG6) (VAL41) [view usage] : c.72.1.5 |Ribokinase-like |Ribokinase-like |PfkB-like kinase |Pyridoxal kinase |Sheep (Ovis aries) [TaxId: 9940]
d3gkxb_ : (LYS2) (ILE33) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Bacteroides fragilis [TaxId: 272559]
d4k3fa_ : (ASP186) (ASP213) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d1x07a_ : (ASN104) (ALA143) [view usage] : c.101.1.1 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |automated matches |Escherichia coli [TaxId: 562]
d1uehb_ : (ASN104) (ALA143) [view usage] : c.101.1.1 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Escherichia coli [TaxId: 562]
d4h8ea_ : (LYS113) (ALA149) [view usage] : c.101.1.1 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |automated matches |Staphylococcus aureus [TaxId: 158879]
d3urya2 : (LYS277) (LYS308) [view usage] : d.15.6.0 |beta-Grasp (ubiquitin-like) |Superantigen toxins, C-terminal domain |automated matches |automated matches |Staphylococcus aureus [TaxId: 93061]
d3bb6c_ : (ASN7) (VAL45) [view usage] : b.82.2.13 |Double-stranded beta-helix |Clavaminate synthase-like |TehB-like |Uncharacterized protein YeaR |Escherichia coli [TaxId: 562]
d1rfua_ : (GLU4) (VAL41) [view usage] : c.72.1.5 |Ribokinase-like |Ribokinase-like |PfkB-like kinase |Pyridoxal kinase |Sheep (Ovis aries) [TaxId: 9940]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, b.82, c.94, c.2, c.56, c.42, c.72, c.23, c.37, c.47, c.55, d.248, b.6, c.71, c.101, d.145, c.3, d.15, c.70, b.106,
d.135