Tableau information
Concept source: d1qs8a_ amino acid (a.a.) range (THR219)(VAL239)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR219) (PRO223) E1
(PRO223) (ALA232) H2
(ASN235) (VAL239) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 107.3° H2
E3 -104.6° -122.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4i26a_ : (ASN340) (THR369) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
d4i26c_ : (ASN340) (VAL368) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
d2ewoh_ : (ALA2) (GLU20) [view usage] : d.126.1.0 |Pentein, beta/alpha-propeller |Pentein |automated matches |automated matches |Streptococcus mutans [TaxId: 1309]
d1uw5d_ : (VAL2) (LEU43) [view usage] : d.129.3.4 |TBP-like |Bet v1-like |Phoshatidylinositol transfer protein, PITP |Phoshatidylinositol transfer protein, PITP |Human (Homo sapiens) [TaxId: 9606]
d3pl1a_ : (LEU159) (CYS184) [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d4dalb_ : (GLU318) (THR348) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d2d4ec_ : (GLU343) (VAL372) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Thermus thermophilus [TaxId: 300852]
d2feia_ : (LEU45) (GLU59) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4o5ha_ : (GLN347) (ALA376) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d3gvva_ : (ASP79) (MET100) [view usage] : c.1.22.1 |TIM beta/alpha-barrel |UROD/MetE-like |Uroporphyrinogen decarboxylase, UROD |Uroporphyrinogen decarboxylase, UROD |Human (Homo sapiens) [TaxId: 9606]
d3a9ra2 : (ASN531) (MET557) [view usage] : b.43.2.0 |Reductase/isomerase/elongation factor common domain |FucI/AraA C-terminal domain-like |automated matches |automated matches |Geobacillus pallidus [TaxId: 33936]
d1rp0a1 : (THR111) (ALA140) [view usage] : c.3.1.6 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |Thi4-like |Thiazole biosynthetic enzyme Thi4 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1cmsa_ : (LYS221) (GLN242) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Chymosin (synonym: renin) |Cow (Bos taurus) [TaxId: 9913]
d1ilwa_ : (ALA154) (PHE180) [view usage] : c.33.1.3 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Pyrazinamidase/nicotinamidase |Pyrococcus horikoshii [TaxId: 53953]
d2d1pd_ : (GLY106) (PHE128) [view usage] : c.114.1.1 |DsrEFH-like |DsrEFH-like |DsrEF-like |tRNA 2-thiouridine synthesizing protein D, TusD |Escherichia coli [TaxId: 562]
d1d5ta1 : (PRO223) (ASN252) [view usage] : c.3.1.3 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |GDI-like N domain |Guanine nucleotide dissociation inhibitor, GDI |Cow (Bos taurus) [TaxId: 9913]
d2a2ab_ : (GLU2) (GLU17) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2z1aa1 : (THR405) (GLY439) [view usage] : d.114.1.1 |5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain |5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain |5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain |5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain |Thermus thermophilus [TaxId: 274]
d3hb7g_ : (GLY150) (THR174) [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Alkaliphilus metalliredigens [TaxId: 293826]
d3dnpa_ : (TYR136) (PRO156) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d3mcqa1 : (TYR11) (ALA47) [view usage] : d.79.4.0 |Bacillus chorismate mutase-like |PurM N-terminal domain-like |automated matches |automated matches |Methylobacillus flagellatus [TaxId: 265072]
d2hy5a1 : (LYS106) (GLY129) [view usage] : c.114.1.1 |DsrEFH-like |DsrEFH-like |DsrEF-like |Sulfurtransferase DsrE |Chromatium vinosum [TaxId: 1049]
d1e30a_ : (THR6) (GLY28) [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Rusticyanin |Thiobacillus ferrooxidans [TaxId: 920]
d1s04a_ : (MET1) (LEU26) [view usage] : b.122.1.6 |PUA domain-like |PUA domain-like |ProFAR isomerase associated domain |Hypothetical protein PF0455 |Pyrococcus furiosus [TaxId: 2261]
d3bhdb_ : (LEU5) (TYR31) [view usage] : d.63.1.2 |CYTH-like phosphatases |CYTH-like phosphatases |CYTH domain |Thiamine-triphosphatase (ThTPase) |Human (Homo sapiens) [TaxId: 9606]
d1h2as_ : (THR128) (GLY149) [view usage] : e.19.1.1 |HydA/Nqo6-like |HydA/Nqo6-like |Nickel-iron hydrogenase, small subunit |Nickel-iron hydrogenase, small subunit |Desulfovibrio vulgaris [TaxId: 881]
d1uw5a_ : (VAL2) (LEU43) [view usage] : d.129.3.4 |TBP-like |Bet v1-like |Phoshatidylinositol transfer protein, PITP |Phoshatidylinositol transfer protein, PITP |Human (Homo sapiens) [TaxId: 9606]
d2p0ra_ : (GLU316) (ASN335) [view usage] : d.3.1.3 |Cysteine proteinases |Cysteine proteinases |Calpain large subunit, catalytic domain (domain II) |Calpain large subunit, catalytic domain (domain II) |Human (Homo sapiens) [TaxId: 9606]
d1ss4b_ : (VAL96) (GLY119) [view usage] : d.32.1.6 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Hypothetical protein BC1747 |Hypothetical protein BC1747 |Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]
d1l1sa_ : (GLY89) (PRO113) [view usage] : c.114.1.1 |DsrEFH-like |DsrEFH-like |DsrEF-like |Hypothetical protein MTH1491 |Methanobacterium thermoautotrophicum [TaxId: 145262]
d2w8pa_ : (THR379) (THR408) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4u3wb_ : (THR335) (THR364) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d1qs8a_ : (THR219) (VAL239) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Plasmepsin (a hemoglobin-degrading enzyme) |Plasmodium vivax [TaxId: 5855]
d1xr6a_ : (TYR335) (PRO355) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Human rhinovirus 1B, HRV-1B [TaxId: 12129]
d4knaa_ : (PHE318) (ILE346) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
d3c1nc1 : (GLU146) (ASP161) [view usage] : c.73.1.3 |Carbamate kinase-like |Carbamate kinase-like |PyrH-like |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]
d2ouaa_ : (GLY224) (THR244) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Nocardiopsis alba [TaxId: 53437]
d1zvka_ : (ASP252) (TYR301) [view usage] : c.41.1.2 |Subtilisin-like |Subtilisin-like |Serine-carboxyl proteinase, SCP |automated matches |Alicyclobacillus sendaiensis [TaxId: 192387]
d1fuia1 : (ASN527) (MET553) [view usage] : b.43.2.1 |Reductase/isomerase/elongation factor common domain |FucI/AraA C-terminal domain-like |L-fucose isomerase, C-terminal domain |L-fucose isomerase, C-terminal domain |Escherichia coli [TaxId: 562]
d3b4wa_ : (GLN326) (CYS355) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d1ou5a2 : (ILE49) (ASN73) [view usage] : d.218.1.4 |Nucleotidyltransferase |Nucleotidyltransferase |Poly A polymerase head domain-like |tRNA CCA-adding enzyme, head domain |Human (Homo sapiens), mitochondrial [TaxId: 9606]
d2pd2a_ : (ILE85) (LEU108) [view usage] : c.114.1.0 |DsrEFH-like |DsrEFH-like |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
d2cdqa1 : (LYS165) (THR179) [view usage] : c.73.1.3 |Carbamate kinase-like |Carbamate kinase-like |PyrH-like |Aspartokinase |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2fyha_ : (LYS132) (ILE156) [view usage] : d.61.1.0 |LigT-like |LigT-like |automated matches |automated matches |Pyrococcus furiosus [TaxId: 186497]
d2rdea2 : (VAL24) (PRO49) [view usage] : b.45.2.2 |Split barrel-like |PilZ domain-like |PilZ domain-associated domain |Hypothetical protein VCA0042, N-terminal domain |Vibrio cholerae O395 [TaxId: 345073]
d1t27a_ : (VAL2) (VAL44) [view usage] : d.129.3.4 |TBP-like |Bet v1-like |Phoshatidylinositol transfer protein, PITP |Phoshatidylinositol transfer protein, PITP |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1b7go2 : (HIS219) (SER251) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |Sulfolobus solfataricus [TaxId: 2287]
d1muta_ : (ALA30) (PRO62) [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |Nucleoside triphosphate pyrophosphorylase (MutT) |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.1, c.108, c.82, b.47, b.50, d.129, d.144, d.3, d.81, b.6, d.32, b.122, d.126, b.45, c.73, c.41, c.33, d.79, b.34,
c.3, d.63, b.43, e.19, d.218, d.113, c.114, d.61, d.114