Tableau information
Concept source: d1rhi1_ amino acid (a.a.) range (VAL21)(PHE60)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL21) (PRO25) E1
(ARG46) (VAL51) H2
(ARG54) (PHE60) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -17.3° H2
E3 153.2° 160.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1fpn1_ : (LEU15) (THR61) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Rhinovirus coat proteins |Human rhinovirus A 2 (HRV-2) [TaxId: 12130]
d1rmu1_ : (ILE21) (PHE60) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Rhinovirus coat proteins |Human rhinovirus B 14 (HRV-14) [TaxId: 12131]
d2rmu1_ : (ILE21) (PHE60) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Rhinovirus coat proteins |Human rhinovirus B 14 (HRV-14) [TaxId: 12131]
d2d8va1 : (GLU16) (ARG55) [view usage] : g.43.1.1 |B-box zinc-binding domain |B-box zinc-binding domain |B-box zinc-binding domain |Zinc finger FYVE domain-containing protein 19 |Mouse (Mus musculus) [TaxId: 10090]
d1rui1_ : (ILE21) (PHE60) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Rhinovirus coat proteins |Human rhinovirus B 14 (HRV-14) [TaxId: 12131]
d4pdwa_ : (ILE21) (PHE60) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |automated matches |Human rhinovirus 14 [TaxId: 12131]
d2df4a1 : (LEU44) (ASP80) [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Glutamyl-tRNA(Gln) amidotransferase subunit A |Staphylococcus aureus [TaxId: 1280]
d1rug1_ : (ILE21) (PHE60) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Rhinovirus coat proteins |Human rhinovirus B 14 (HRV-14) [TaxId: 12131]
d1ev11_ : (VAL18) (ASN56) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Human enterovirus B coat proteins |Human echovirus 1 [TaxId: 46633]
d1oopa_ : (ILE18) (TYR56) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Swine vesicular disease virus coat proteins |Swine vesicular disease virus [TaxId: 12075]
d1sva6_ : (GLY105) (GLY155) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |Polyomavirus coat proteins |Simian virus 40, Sv40 [TaxId: 10633]
d1rhi1_ : (VAL21) (PHE60) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Rhinovirus coat proteins |Human rhinovirus 3, (HRV-3) [TaxId: 44130]
d1rue1_ : (ILE21) (PHE60) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Rhinovirus coat proteins |Human rhinovirus B 14 (HRV-14) [TaxId: 12131]
d1wkpb_ : (GLY116) (ARG166) [view usage] : b.17.1.0 |PEBP-like |PEBP-like |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1wkpa_ : (GLY116) (ARG166) [view usage] : b.17.1.0 |PEBP-like |PEBP-like |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2jc4a_ : (LYS230) (TRP256) [view usage] : d.151.1.0 |DNase I-like |DNase I-like |automated matches |automated matches |Neisseria meningitidis [TaxId: 487]
d1ruc1_ : (ILE21) (PHE60) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Rhinovirus coat proteins |Human rhinovirus B 14 (HRV-14) [TaxId: 12131]
d1k5ma_ : (ILE1021) (PHE1060) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Rhinovirus coat proteins |Human rhinovirus B 14 (HRV-14) [TaxId: 12131]
d1wkoa_ : (GLY119) (ARG170) [view usage] : b.17.1.1 |PEBP-like |PEBP-like |Phosphatidylethanolamine binding protein |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.117, d.151, b.121, b.17, g.43