Tableau information
Concept source: d4aooa_ amino acid (a.a.) range (MET78)(ALA98)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(MET78) (ASP82) E1
(ASP82) (ASP88) H2
(TRP92) (ALA98) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 69.9° H2
E3 153.8° 106.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.5° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4lnfa1 : (LYS49) (ASP73) [view usage] : d.15.9.0 |beta-Grasp (ubiquitin-like) |Glutamine synthetase, N-terminal domain |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d2xhfa_ : (GLY143) (ASP165) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Alvinella pompejana [TaxId: 6376]
d1i4wa_ : (PRO226) (ASP251) [view usage] : c.66.1.24 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |rRNA adenine dimethylase-like |Transcription factor sc-mtTFB |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3umja_ : (THR74) (ARG92) [view usage] : c.69.1.18 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Bacterial lipase |automated matches |Geobacillus zalihae [TaxId: 213419]
d2zcid1 : (THR58) (SER75) [view usage] : c.109.1.0 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |automated matches |automated matches |Corynebacterium glutamicum [TaxId: 1718]
d1jc5a_ : (ARG126) (TYR145) [view usage] : d.32.1.4 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Methylmalonyl-CoA epimerase |Methylmalonyl-CoA epimerase |Propionibacterium shermanii [TaxId: 1752]
d1b2va_ : (ASP96) (VAL110) [view usage] : d.35.1.1 |Heme-binding protein A (HasA) |Heme-binding protein A (HasA) |Heme-binding protein A (HasA) |Heme-binding protein A (HasA) |Serratia marcescens [TaxId: 615]
d1rxla_ : (GLN39) (ASP59) [view usage] : b.2.3.6 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |Dr-family adhesin |DraA/Afimbrial adhesin Afa-III |Escherichia coli [TaxId: 562]
d2xhfb_ : (GLY143) (TYR160) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Alvinella pompejana [TaxId: 6376]
d1jc5b_ : (ASN125) (TYR145) [view usage] : d.32.1.4 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Methylmalonyl-CoA epimerase |Methylmalonyl-CoA epimerase |Propionibacterium shermanii [TaxId: 1752]
d1ussa_ : (GLU236) (LYS251) [view usage] : a.4.5.13 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Linker histone H1/H5 |Histone H1 homologue Hho1p |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1clva2 : (ASN98) (GLY159) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Animal alpha-amylase |Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]
d1wv3a2 : (ASN111) (ASP132) [view usage] : b.26.1.4 |SMAD/FHA domain |SMAD/FHA domain |EssC N-terminal domain-like |Protein EssC |Staphylococcus aureus [TaxId: 1280]
d1k25b2 : (GLN1728) (THR1747) [view usage] : d.11.1.1 |Penicillin-binding protein 2x (pbp-2x), c-terminal domain |Penicillin-binding protein 2x (pbp-2x), c-terminal domain |Penicillin-binding protein 2x (pbp-2x), c-terminal domain |Penicillin-binding protein 2x (pbp-2x), c-terminal domain |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2uydx_ : (ASP96) (VAL110) [view usage] : d.35.1.1 |Heme-binding protein A (HasA) |Heme-binding protein A (HasA) |Heme-binding protein A (HasA) |automated matches |Serratia marcescens [TaxId: 615]
d1xebg_ : (LEU61) (SER84) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Hypothetical protein PA0115 |Pseudomonas aeruginosa [TaxId: 287]
d1wgoa_ : (GLY71) (ARG89) [view usage] : b.1.3.1 |Immunoglobulin-like beta-sandwich |PKD domain |PKD domain |VPS10 domain-containing receptor SorCS2 |Human (Homo sapiens) [TaxId: 9606]
d3ebta1 : (ASP30) (GLY50) [view usage] : d.17.4.9 |Cystatin-like |NTF2-like |SnoaL-like polyketide cyclase |Uncharacterized protein BPSS0132 |Burkholderia pseudomallei [TaxId: 28450]
d2zosb_ : (SER66) (LEU92) [view usage] : c.108.1.10 |HAD-like |HAD-like |Predicted hydrolases Cof |automated matches |Pyrococcus horikoshii [TaxId: 53953]
d2zcia1 : (THR58) (SER75) [view usage] : c.109.1.0 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |automated matches |automated matches |Corynebacterium glutamicum [TaxId: 1718]
d1y9kc_ : (GLY115) (GLU150) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |automated matches |Bacillus cereus [TaxId: 226900]
d2fwsa1 : (ASN403) (PRO433) [view usage] : b.1.27.1 |Immunoglobulin-like beta-sandwich |CalX-like |CalX-beta domain |Sodium/calcium exchanger 1 |Dog (Canis familiaris) [TaxId: 9615]
d3jsla_ : (GLY279) (PHE308) [view usage] : d.142.2.2 |ATP-grasp |DNA ligase/mRNA capping enzyme, catalytic domain |Adenylation domain of NAD+-dependent DNA ligase |Adenylation domain of NAD+-dependent DNA ligase |Staphylococcus aureus [TaxId: 1280]
d3ghpb_ : (GLY94) (THR117) [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Cellulosomal scaffoldin adaptor protein B, ScaB |Acetivibrio cellulolyticus [TaxId: 35830]
d2ckdb_ : (ARG272) (ALA307) [view usage] : c.66.1.57 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |ML2640-like |automated matches |Mycobacterium leprae [TaxId: 1769]
d2j6ba1 : (GLY72) (GLN109) [view usage] : d.321.1.1 |STIV B116-like |STIV B116-like |STIV B116-like |Afv3-109 |Acidianus filamentous virus 1 [TaxId: 235266]
d5gcna_ : (GLY129) (HIS159) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Catalytic domain of GCN5 histone acetyltransferase |Tetrahymena thermophila [TaxId: 5911]
d2z5ga_ : (THR74) (ARG92) [view usage] : c.69.1.18 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Bacterial lipase |automated matches |Geobacillus zalihae [TaxId: 213419]
d2d4wa2 : (GLY343) (GLY368) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Cellulomonas sp. [TaxId: 40001]
d4lnfj1 : (LYS49) (LEU74) [view usage] : d.15.9.0 |beta-Grasp (ubiquitin-like) |Glutamine synthetase, N-terminal domain |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d3d5ka_ : (VAL90) (VAL117) [view usage] : f.5.1.1 |Outer membrane efflux proteins (OEP) |Outer membrane efflux proteins (OEP) |Outer membrane efflux proteins (OEP) |Outer membrane protein OprM |Pseudomonas aeruginosa [TaxId: 287]
d1jc4a_ : (ARG126) (TYR145) [view usage] : d.32.1.4 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Methylmalonyl-CoA epimerase |Methylmalonyl-CoA epimerase |Propionibacterium shermanii [TaxId: 1752]
d1pmjx_ : (LYS83) (VAL108) [view usage] : b.18.1.18 |Galactose-binding domain-like |Galactose-binding domain-like |Family 27 carbohydrate binding module, CBM27 |Beta-1,4-mannanase ManA |Caldicellulosiruptor saccharolyticus [TaxId: 44001]
d1mh3a2 : (ALA112) (THR128) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d1xeba_ : (LEU61) (SER84) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Hypothetical protein PA0115 |Pseudomonas aeruginosa [TaxId: 287]
d1m32a_ : (ASP185) (ARG207) [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |2-aminoethylphosphonate transaminase |Salmonella typhimurium [TaxId: 90371]
d2d8ka_ : (ILE111) (PRO135) [view usage] : b.7.1.0 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4c9za_ : (CYS256) (SER280) [view usage] : b.8.1.2 |TRAF domain-like |TRAF domain-like |SIAH, seven in absentia homolog |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1t9kc_ : (ILE281) (GLU315) [view usage] : c.124.1.5 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |IF2B-like |Probable methylthioribose-1-phosphate isomerase TM0911 |Thermotoga maritima [TaxId: 2336]
d1yvka1 : (GLY119) (LEU156) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Hypothetical protein YvbK (BSu33890) |Bacillus subtilis [TaxId: 1423]
d2q87c_ : (GLY82) (PRO109) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2xh6a2 : (ALA205) (SER228) [view usage] : b.18.1.0 |Galactose-binding domain-like |Galactose-binding domain-like |automated matches |automated matches |Clostridium perfringens [TaxId: 1502]
d3am2a1 : (ALA205) (SER228) [view usage] : b.18.1.37 |Galactose-binding domain-like |Galactose-binding domain-like |Clostridium perfringens enterotoxin (CPE), C-terminal domain |Clostridium perfringens enterotoxin (CPE), C-terminal domain |Clostridium perfringens [TaxId: 1502]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.67, c.69, c.94, c.108, c.66, c.124, c.47, c.55, b.18, b.2, b.85, d.32, b.1, d.108, d.17, c.109, d.142, b.26, a.4,
d.15, b.7, d.11, b.8, d.35, f.5, d.321