Tableau information
Concept source: d2fazb_ amino acid (a.a.) range (ARG11)(LEU72)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG11) (THR15) E1
(LYS24) (HIS37) H2
(ASP67) (LEU72) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 124.1° H2
E3 145.0° -69.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3hhxa_ : (LYS117) (GLY136) [view usage] : b.3.6.0 |Prealbumin-like |Aromatic compound dioxygenase |automated matches |automated matches |Rhodococcus opacus [TaxId: 37919]
d2a4oa_ : (GLY165) (ASN180) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |3C cysteine protease (picornain 3C) |Human hepatitis a virus hu/northern africa/mbb/1978 [TaxId: 12100]
d2r1dh1 : (GLY180) (VAL206) [view usage] : b.29.1.4 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Laminin G-like module |Ligand-binding domain of neurexin 1beta |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1jmxa4 : (GLU366) (ILE379) [view usage] : b.1.18.14 |Immunoglobulin-like beta-sandwich |E set domains |Quinohemoprotein amine dehydrogenase A chain, domains 4 and 5 |Quinohemoprotein amine dehydrogenase A chain, domains 4 and 5 |Pseudomonas putida [TaxId: 303]
d1u0ea_ : (PRO402) (PRO441) [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Mouse (Mus musculus) [TaxId: 10090]
d3boda_ : (GLY226) (VAL252) [view usage] : b.29.1.4 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Laminin G-like module |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1nneb2 : (LEU1578) (LEU1616) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |DNA repair protein MutS, the C-terminal domain |Thermus aquaticus [TaxId: 271]
d2i3ea_ : (LEU156) (ASP190) [view usage] : d.61.1.0 |LigT-like |LigT-like |automated matches |automated matches |Carassius auratus [TaxId: 7957]
d1ei7a_ : (SER1) (ASP19) [view usage] : a.24.5.1 |Four-helical up-and-down bundle |TMV-like viral coat proteins |TMV-like viral coat proteins |Tobacco mosaic virus coat protein |Tobacco mosaic virus, vulgare strain [TaxId: 12242]
d3gdma_ : (GLU143) (GLY190) [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2wo3a_ : (TRP45) (ILE59) [view usage] : b.18.1.4 |Galactose-binding domain-like |Galactose-binding domain-like |Ephrin receptor ligand binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3pdva_ : (LEU3) (GLY19) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |automated matches |Homo sapiens, influenza a virus [TaxId: 9606]
d1q2la2 : (GLY940) (SER958) [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Protease III |Escherichia coli [TaxId: 562]
d1xxea1 : (VAL87) (ASN118) [view usage] : d.14.1.7 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC |UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC |Aquifex aeolicus [TaxId: 63363]
d3bu7a1 : (TRP173) (VAL192) [view usage] : b.82.1.23 |Double-stranded beta-helix |RmlC-like cupins |Gentisate 1,2-dioxygenase-like |Gentisate 1,2-dioxygenase |Silicibacter pomeroyi [TaxId: 89184]
d1flha_ : (LEU220) (SER250) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Pepsin(ogen) |Human (Homo sapiens), isoform 3A [TaxId: 9606]
d2dgpa_ : (ALA98) (PRO122) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2pa1a_ : (LEU3) (GLY19) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1t97b_ : (GLY30) (THR70) [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
d4qfia_ : (GLU41) (GLU66) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1np1a_ : (LYS1) (VAL25) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Nitrophorin 1 |Rhodnius prolixus [TaxId: 13249]
d3hj8a_ : (LYS117) (GLY136) [view usage] : b.3.6.0 |Prealbumin-like |Aromatic compound dioxygenase |automated matches |automated matches |Rhodococcus opacus [TaxId: 37919]
d1c93a_ : (THR10) (ASP32) [view usage] : c.1.8.5 |TIM beta/alpha-barrel |(Trans)glycosidases |Type II chitinase |Endo-beta-N-acetylglucosaminidase |Streptomyces plicatus, endoglycosidase H [TaxId: 1922]
d1g62a_ : (MET1) (ASN21) [view usage] : d.126.1.1 |Pentein, beta/alpha-propeller |Pentein |Ribosome anti-association factor eIF6 (aIF6) |Ribosome anti-association factor eIF6 (aIF6) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2nxea1 : (VAL50) (ALA72) [view usage] : c.66.1.39 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Ribosomal protein L11 methyltransferase PrmA |PrmA-like protein TTHA0656 (TT0836) |Thermus thermophilus [TaxId: 274]
d1gy1a_ : (THR6) (GLY28) [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Rusticyanin |Thiobacillus ferrooxidans [TaxId: 920]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, b.82, d.58, b.29, b.47, c.66, c.80, b.50, c.37, d.185, d.2, b.60, b.18, d.14, b.6, b.1, d.126, d.5, d.15, b.3,
a.24, b.36, d.61