Tableau information
Concept source: d3bt1u2 amino acid (a.a.) range (GLY191)(GLY217)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY191) (GLY199) E1
(ASN200) (THR210) H2
(PHE211) (GLY217) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 145.5° H2
E3 120.8° -87.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2rc9b_ : (LEU34) (GLY70) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4kcdb_ : (LEU34) (GLY70) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1tdfa2 : (ASP178) (ASN204) [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |Thioredoxin reductase |Escherichia coli [TaxId: 562]
d1dsya_ : (GLY273) (GLU292) [view usage] : b.7.1.2 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |Synaptotagmin-like (S variant) |C2 domain from protein kinase c (alpha) |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4l1la_ : (GLY273) (PRO291) [view usage] : b.7.1.2 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |Synaptotagmin-like (S variant) |C2 domain from protein kinase c (alpha) |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3etea2 : (GLY278) (GLY312) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |automated matches |Cow (Bos taurus) [TaxId: 9913]
d4kcda_ : (LEU34) (GLY70) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1ywha3 : (GLY191) (GLY217) [view usage] : g.7.1.3 |Snake toxin-like |Snake toxin-like |Extracellular domain of cell surface receptors |Urokinase plasminogen activator surface receptor uPAR |Human (Homo sapiens) [TaxId: 9606]
d2pi8b_ : (GLN305) (LYS334) [view usage] : b.52.1.4 |Double psi beta-barrel |Barwin-like endoglucanases |MLTA-like |Membrane-bound lytic murein transglycosylase A, MLTA |Escherichia coli [TaxId: 562]
d3k2wh_ : (LYS359) (GLU373) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudoalteromonas atlantica [TaxId: 342610]
d3etda2 : (GLY278) (GLY312) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |automated matches |Cow (Bos taurus) [TaxId: 9913]
d3mvqa2 : (GLY278) (GLY312) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Glutamate dehydrogenase |Cow (Bos taurus) [TaxId: 9913]
d1wp1a_ : (GLY307) (LEU332) [view usage] : f.5.1.1 |Outer membrane efflux proteins (OEP) |Outer membrane efflux proteins (OEP) |Outer membrane efflux proteins (OEP) |Outer membrane protein OprM |Pseudomonas aeruginosa [TaxId: 287]
d1d2ea3 : (ALA123) (ASP145) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Elongation factor Tu (EF-Tu), N-terminal (G) domain |Cow (Bos taurus), mitochondrial [TaxId: 9913]
d2uzpa_ : (GLY273) (VAL290) [view usage] : b.7.1.2 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |Synaptotagmin-like (S variant) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1qjva_ : (ALA89) (SER118) [view usage] : b.80.1.5 |Single-stranded right-handed beta-helix |Pectin lyase-like |Pectin methylesterase |Pectin methylesterase PemA |Erwinia chrysanthemi [TaxId: 556]
d1fx0a3 : (GLU145) (ARG162) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Central domain of alpha subunit of F1 ATP synthase |Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]
d1d8tb3 : (TYR76) (ASP99) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Elongation factor Tu (EF-Tu), N-terminal (G) domain |Escherichia coli [TaxId: 562]
d1a12a_ : (GLY100) (LEU117) [view usage] : b.69.5.1 |7-bladed beta-propeller |RCC1/BLIP-II |Regulator of chromosome condensation RCC1 |Regulator of chromosome condensation RCC1 |Human (Homo sapiens) [TaxId: 9606]
d4dnla_ : (GLY273) (PRO291) [view usage] : b.7.1.2 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |Synaptotagmin-like (S variant) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ywhe3 : (GLY191) (GLY217) [view usage] : g.7.1.3 |Snake toxin-like |Snake toxin-like |Extracellular domain of cell surface receptors |Urokinase plasminogen activator surface receptor uPAR |Human (Homo sapiens) [TaxId: 9606]
d2x6ta_ : (GLY195) (VAL214) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Escherichia coli [TaxId: 562]
d3l4md_ : (ASP258) (TRP282) [view usage] : b.69.2.0 |7-bladed beta-propeller |YVTN repeat-like/Quinoprotein amine dehydrogenase |automated matches |automated matches |Paracoccus denitrificans [TaxId: 318586]
d2iypc1 : (GLY119) (SER139) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Lactococcus lactis [TaxId: 1358]
d1tuia3 : (SER78) (ASP100) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Elongation factor Tu (EF-Tu), N-terminal (G) domain |Thermus aquaticus [TaxId: 271]
d3mvqf2 : (GLY278) (GLY312) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Glutamate dehydrogenase |Cow (Bos taurus) [TaxId: 9913]
d3k2wd_ : (LYS359) (GLU373) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudoalteromonas atlantica [TaxId: 342610]
d1o22a_ : (GLU8) (VAL53) [view usage] : d.238.1.1 |Hypothetical protein TM0875 |Hypothetical protein TM0875 |Hypothetical protein TM0875 |Hypothetical protein TM0875 |Thermotoga maritima [TaxId: 2336]
d1bmfa3 : (ARG143) (ARG161) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Central domain of alpha subunit of F1 ATP synthase |Cow (Bos taurus) [TaxId: 9913]
d2hvyb1 : (PRO51) (VAL72) [view usage] : b.43.3.5 |Reductase/isomerase/elongation factor common domain |Translation proteins |Gar1-like SnoRNP |Gar1 homolog PF1791 |Pyrococcus furiosus [TaxId: 2261]
d3bt1u2 : (GLY191) (GLY217) [view usage] : g.7.1.3 |Snake toxin-like |Snake toxin-like |Extracellular domain of cell surface receptors |Urokinase plasminogen activator surface receptor uPAR |Human (Homo sapiens) [TaxId: 9606]
d1pf5a_ : (ARG4) (GLY28) [view usage] : d.79.1.1 |Bacillus chorismate mutase-like |YjgF-like |YjgF/L-PSP |Hypothetical protein YjgH |Escherichia coli [TaxId: 562]
d2fp4b2 : (GLY66) (LYS91) [view usage] : d.142.1.4 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |Succinyl-CoA synthetase, beta-chain, N-terminal domain |Succinyl-CoA synthetase, beta-chain, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
d2x6tg_ : (GLY195) (VAL214) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.80, c.94, c.2, b.69, c.82, c.37, b.52, d.79, d.142, c.3, b.7, b.43, g.7, f.5, d.238