Protein Concepts Dictionary

Tableau information

Concept source:  d3hiqb_  amino acid (a.a.) range (ILE2)(PRO45)

nSSEs in this Concept: 3

String of secondary struct.elems. (SSEs) defining this concept: EHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ILE2)    (ASN7) E1
	   (THR12)   (ILE27) H2
	   (LEU39)   (PRO45) E3

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                   
H2     -166.9°   H2            
E3     -139.9°   43.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1x86b_ :     (ALA3)   (ASN41)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |RhoA |Human (Homo sapiens) [TaxId: 9606]
 d4drxa1 :     (ARG2)   (SER38)   [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |automated matches |Sheep (Ovis aries) [TaxId: 9940]
 d1rzoc_ :  (PRO1003) (VAL1049)   [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Ricin A-chain |Castor bean (Ricinus communis) [TaxId: 3988]
 d1kz7d_ :  (MET1001) (ASN1039)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |CDC42 |Human (Homo sapiens) [TaxId: 9606]
 d4dalb_ :   (GLY357)  (GLY381)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
 d3hisa_ :     (ILE3)   (PRO45)   [view usage] : d.165.1.0 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |automated matches |automated matches |Common soapwort (Saponaria officinalis) [TaxId: 3572]
 d3n1da_ :     (ASP1)   (SER40)   [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |automated matches |Momordica balsamina [TaxId: 3672]
 d2gkpa1 :    (PRO38)   (VAL66)   [view usage] : d.351.1.1 |NMB0488-like |NMB0488-like |NMB0488-like |Hypothetical protein NMB0488 |Neisseria meningitidis [TaxId: 487]
 d3l8ab_ :   (SER244)  (PRO270)   [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Streptococcus mutans [TaxId: 210007]
 d1lp8a_ :     (ALA1)   (PRO45)   [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Dianthin 30 |Clove pink (Dianthus caryophyllus) [TaxId: 3570]
 d1gika_ :     (ASN2)   (THR43)   [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Antiviral protein S |Pokeweed (Phytolacca americana) [TaxId: 3527]
 d3mrwa_ :     (ASP1)   (SER40)   [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |automated matches |Momordica balsamina [TaxId: 3672]
 d2q3na1 :     (ILE4)   (ARG39)   [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Agglutinin-1 chain A |Abrus precatorius [TaxId: 3816]
 d1qi7a_ :     (VAL1)   (PRO45)   [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Saporin So6 |Common soapwort (Saponaria officinalis) [TaxId: 3572]
 d1lb1b_ :     (ALA3)   (ASN41)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |RhoA |Human (Homo sapiens) [TaxId: 9606]
 d3sg0a_ :   (LEU353)  (ILE374)   [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 316058]
 d1rzoa_ :  (LYS1004) (VAL1049)   [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Ricin A-chain |Castor bean (Ricinus communis) [TaxId: 3988]
 d1llwa3 :     (CYS1)   (ALA36)   [view usage] : d.153.1.1 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Class II glutamine amidotransferases |Alpha subunit of glutamate synthase, N-terminal domain |Synechocystis sp. [TaxId: 1143]
 d3ej5x_ :     (PRO7)   (PRO46)   [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |automated matches |Castor bean (Ricinus communis) [TaxId: 3988]
 d1xcgb_ :     (ALA3)   (ASN41)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |RhoA |Human (Homo sapiens) [TaxId: 9606]
 d3l8aa_ :   (SER244)  (PRO270)   [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Streptococcus mutans [TaxId: 210007]
 d2g5xa_ :     (ARG1)   (LYS38)   [view usage] : d.165.1.0 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |automated matches |automated matches |Lychnis chalcedonica [TaxId: 39855]
 d1rl0a_ :     (ALA1)   (PRO45)   [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Dianthin 30 |Clove pink (Dianthus caryophyllus) [TaxId: 3570]
 d1ahaa_ :     (ASP1)   (LEU38)   [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |alpha-Momorcharin (momordin) |Bitter gourd (Momordica charantia) [TaxId: 3673]
 d4g6ub_ :    (SER38)   (VAL67)   [view usage] : d.351.1.0 |NMB0488-like |NMB0488-like |automated matches |automated matches |Escherichia coli [TaxId: 83334]
 d1udla_ :    (GLY76)   (SER93)   [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Intersectin 2 (KIAA1256) |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.67,    c.82,    c.93,   d.165,    c.37,   d.153,    c.32,    b.34,   d.351