Tableau information
Concept source: d2xy8a_ amino acid (a.a.) range (ARG7)(ASN40)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG7) (THR16) E1
(ALA23) (HIS28) H2
(ILE31) (ASN40) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 64.6° H2
E3 166.0° -121.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2a9ba2 : (PRO114) (HIS140) [view usage] : d.176.1.1 |Oxidoreductase molybdopterin-binding domain |Oxidoreductase molybdopterin-binding domain |Oxidoreductase molybdopterin-binding domain |Sulfite oxidase, middle catalytic domain |Chicken (Gallus gallus) [TaxId: 9031]
d4begb_ : (GLY128) (ARG176) [view usage] : b.17.1.0 |PEBP-like |PEBP-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d1kful2 : (ILE429) (PHE475) [view usage] : b.14.1.1 |Calpain large subunit, middle domain (domain III) |Calpain large subunit, middle domain (domain III) |Calpain large subunit, middle domain (domain III) |Calpain large subunit, middle domain (domain III) |Human (Homo sapiens), M-type [TaxId: 9606]
d3dwka2 : (ASN579) (THR613) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |Penicillin-binding protein 2, PBP2 |Staphylococcus aureus [TaxId: 1280]
d3hc2a1 : (PRO114) (HIS140) [view usage] : d.176.1.0 |Oxidoreductase molybdopterin-binding domain |Oxidoreductase molybdopterin-binding domain |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d2xy8a_ : (ARG7) (ASN40) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |automated matches |Escherichia coli [TaxId: 562]
d2d5ra1 : (ALA38) (PHE81) [view usage] : c.55.3.9 |Ribonuclease H-like motif |Ribonuclease H-like |CAF1-like ribonuclease |CCR4-NOT transcription complex subunit 7, CAF1 |Human (Homo sapiens) [TaxId: 9606]
d2ax5a_ : (ILE65) (SER94) [view usage] : d.15.3.0 |beta-Grasp (ubiquitin-like) |MoaD/ThiS |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3hbqa1 : (PRO114) (HIS140) [view usage] : d.176.1.0 |Oxidoreductase molybdopterin-binding domain |Oxidoreductase molybdopterin-binding domain |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d1na6b1 : (SER78) (GLY103) [view usage] : b.142.1.1 |DNA-binding pseudobarrel domain |DNA-binding pseudobarrel domain |Type II restriction endonuclease effector domain |Restriction endonuclease EcoRII, N-terminal domain |Escherichia coli [TaxId: 562]
d1soxa3 : (PRO114) (HIS140) [view usage] : d.176.1.1 |Oxidoreductase molybdopterin-binding domain |Oxidoreductase molybdopterin-binding domain |Oxidoreductase molybdopterin-binding domain |Sulfite oxidase, middle catalytic domain |Chicken (Gallus gallus) [TaxId: 9031]
d2w22a_ : (THR75) (PRO96) [view usage] : c.69.1.18 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Bacterial lipase |automated matches |Geobacillus thermocatenulatus [TaxId: 33938]
d3srga_ : (PHE178) (SER209) [view usage] : b.68.6.2 |6-bladed beta-propeller |Calcium-dependent phosphotriesterase |Serum paraoxonase/arylesterase 1, PON1 |Serum paraoxonase/arylesterase 1, PON1 |Artificial gene [TaxId: 32630]
d3cgwa_ : (ASP132) (GLY167) [view usage] : c.143.1.1 |CofD-like |CofD-like |CofD-like |LPPG:FO 2-phospho-L-lactate transferase CofD |Methanosarcina mazei [TaxId: 2209]
d1seia_ : (GLY100) (ILE130) [view usage] : d.140.1.1 |Ribosomal protein S8 |Ribosomal protein S8 |Ribosomal protein S8 |Ribosomal protein S8 |Bacillus stearothermophilus [TaxId: 1422]
d3b1oa_ : (ASN13) (GLU45) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
d1xo3a_ : (GLY66) (LEU98) [view usage] : d.15.3.3 |beta-Grasp (ubiquitin-like) |MoaD/ThiS |C9orf74 homolog |C9orf74 homolog |Mouse (Mus musculus) [TaxId: 10090]
d3mgab1 : (ASN87) (MSE151) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Salmonella enterica [TaxId: 90371]
d2a9ca1 : (PRO114) (HIS140) [view usage] : d.176.1.1 |Oxidoreductase molybdopterin-binding domain |Oxidoreductase molybdopterin-binding domain |Oxidoreductase molybdopterin-binding domain |Sulfite oxidase, middle catalytic domain |Chicken (Gallus gallus) [TaxId: 9031]
d2a9db1 : (PRO114) (HIS140) [view usage] : d.176.1.1 |Oxidoreductase molybdopterin-binding domain |Oxidoreductase molybdopterin-binding domain |Oxidoreductase molybdopterin-binding domain |Sulfite oxidase, middle catalytic domain |Chicken (Gallus gallus) [TaxId: 9031]
d3dwkb2 : (ASN579) (THR613) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |Penicillin-binding protein 2, PBP2 |Staphylococcus aureus [TaxId: 1280]
d1v8cb1 : (VAL53) (PRO82) [view usage] : d.15.3.1 |beta-Grasp (ubiquitin-like) |MoaD/ThiS |MoaD |MoaD-related protein, N-terminal domain |Thermus thermophilus [TaxId: 274]
d2pbka_ : (PRO111) (CYS138) [view usage] : b.57.1.1 |Herpes virus serine proteinase, assemblin |Herpes virus serine proteinase, assemblin |Herpes virus serine proteinase, assemblin |KSHV protease |Kaposi's sarcoma-associated herpesvirus [TaxId: 37296]
d1ku0a_ : (THR74) (PRO95) [view usage] : c.69.1.18 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Bacterial lipase |Lipase L1 |Bacillus stearothermophilus [TaxId: 1422]
d3r19a1 : (PRO114) (HIS140) [view usage] : d.176.1.0 |Oxidoreductase molybdopterin-binding domain |Oxidoreductase molybdopterin-binding domain |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d1p35a_ : (SER55) (ASN107) [view usage] : b.28.1.1 |Baculovirus p35 protein |Baculovirus p35 protein |Baculovirus p35 protein |Baculovirus p35 protein |AcMNPV (Autographa californica nuclear polyhedrosis virus) [TaxId: 46015]
d1rowa_ : (LYS70) (ALA109) [view usage] : b.1.11.2 |Immunoglobulin-like beta-sandwich |PapD-like |MSP-like |SSP-19 |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d1p35b_ : (SER55) (CYS105) [view usage] : b.28.1.1 |Baculovirus p35 protein |Baculovirus p35 protein |Baculovirus p35 protein |Baculovirus p35 protein |AcMNPV (Autographa californica nuclear polyhedrosis virus) [TaxId: 46015]
d4bega_ : (GLY128) (ARG176) [view usage] : b.17.1.0 |PEBP-like |PEBP-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d1olqa_ : (ASN167) (PHE197) [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Family 12 endo-1,4-beta-glucanase (cellulase) catalytic domain |Trichoderma reesei, Cel12A [TaxId: 51453]
d2p51a_ : (SER48) (ASP93) [view usage] : c.55.3.0 |Ribonuclease H-like motif |Ribonuclease H-like |automated matches |automated matches |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d3ek6b_ : (PRO211) (GLN237) [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Xanthomonas campestris pv. campestris [TaxId: 340]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, e.3, c.69, b.29, c.72, c.55, b.1, d.176, c.73, d.140, d.15, b.17, c.143, b.28, b.57, b.142, b.14