Tableau information
Concept source: d2bj7a2 amino acid (a.a.) range (ILE85)(LEU120)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ILE85) (HIS91) E1
(HIS95) (GLY105) E2
(GLU106) (LEU120) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 166.7° E2
H3 -25.4° 167.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4e4ja_ : (ILE261) (ASN292) [view usage] : d.126.1.0 |Pentein, beta/alpha-propeller |Pentein |automated matches |automated matches |Mycoplasma penetrans [TaxId: 272633]
d3bt1u3 : (SER156) (GLY179) [view usage] : g.7.1.3 |Snake toxin-like |Snake toxin-like |Extracellular domain of cell surface receptors |Urokinase plasminogen activator surface receptor uPAR |Human (Homo sapiens) [TaxId: 9606]
d2efcb_ : (ALA46) (ARG81) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1onfa3 : (LYS433) (ASN471) [view usage] : d.87.1.1 |CO dehydrogenase flavoprotein C-domain-like |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |FAD/NAD-linked reductases, dimerisation (C-terminal) domain |Glutathione reductase |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d3zoxa_ : (GLY49) (LEU80) [view usage] : a.3.1.0 |Cytochrome c |Cytochrome c |automated matches |automated matches |Nitrosomonas europaea [TaxId: 915]
d1d5mc2 : (GLU183) (ASN220) [view usage] : d.15.6.1 |beta-Grasp (ubiquitin-like) |Superantigen toxins, C-terminal domain |Superantigen toxins, C-terminal domain |Staphylococcal enterotoxin B, SEB |Staphylococcus aureus [TaxId: 1280]
d1gpwd_ : (SER165) (LEU198) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF |Thermotoga maritima [TaxId: 2336]
d1zbra1 : (GLY89) (ILE121) [view usage] : d.126.1.6 |Pentein, beta/alpha-propeller |Pentein |Porphyromonas-type peptidylarginine deiminase |Putative peptidyl-arginine deiminase |Porphyromonas gingivalis [TaxId: 837]
d2wqla_ : (GLU96) (ASN154) [view usage] : d.129.3.1 |TBP-like |Bet v1-like |Pathogenesis-related protein 10 (PR10)-like |automated matches |Carrot (Daucus carota) [TaxId: 4039]
d1m56b1 : (GLY233) (TYR262) [view usage] : b.6.1.2 |Cupredoxin-like |Cupredoxins |Periplasmic domain of cytochrome c oxidase subunit II |Cytochrome c oxidase |Rhodobacter sphaeroides [TaxId: 1063]
d2izwa_ : (ARG114) (SER145) [view usage] : b.121.4.0 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |automated matches |automated matches |Ryegrass mottle virus [TaxId: 119910]
d4twgd_ : (ARG115) (ALA155) [view usage] : c.57.1.0 |Molybdenum cofactor biosynthesis proteins |Molybdenum cofactor biosynthesis proteins |automated matches |automated matches |Mycobacterium ulcerans [TaxId: 362242]
d1s2oa1 : (ASP61) (LEU85) [view usage] : c.108.1.10 |HAD-like |HAD-like |Predicted hydrolases Cof |Sucrose-phosphatase Slr0953 |Synechocystis sp. PCC 6803 [TaxId: 1148]
d1v8ca2 : (VAL130) (SER164) [view usage] : d.129.5.1 |TBP-like |MoaD-related protein, C-terminal domain |MoaD-related protein, C-terminal domain |MoaD-related protein, C-terminal domain |Thermus thermophilus [TaxId: 274]
d1smob_ : (GLU27) (SER51) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |TREM-1 (triggering receptor expressed on myeloid cells 1) |Human (Homo sapiens) [TaxId: 9606]
d1xzpa2 : (GLU252) (LYS291) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |TrmE GTPase domain |Thermotoga maritima [TaxId: 2336]
d1d5xc2 : (GLU183) (ASN220) [view usage] : d.15.6.1 |beta-Grasp (ubiquitin-like) |Superantigen toxins, C-terminal domain |Superantigen toxins, C-terminal domain |Staphylococcal enterotoxin B, SEB |Staphylococcus aureus [TaxId: 1280]
d4gcpa_ : (LEU43) (THR77) [view usage] : f.4.3.1 |Transmembrane beta-barrels |Porins |Porin |Porin |Escherichia coli, different sequences [TaxId: 562]
d1dbna_ : (GLY88) (PRO138) [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Maackia amurensis, leukoagglutinin [TaxId: 37501]
d1g61a_ : (LEU2062) (ASN2092) [view usage] : d.126.1.1 |Pentein, beta/alpha-propeller |Pentein |Ribosome anti-association factor eIF6 (aIF6) |Ribosome anti-association factor eIF6 (aIF6) |Methanococcus jannaschii [TaxId: 2190]
d3bt2u1 : (ASN52) (ASN80) [view usage] : g.7.1.3 |Snake toxin-like |Snake toxin-like |Extracellular domain of cell surface receptors |Urokinase plasminogen activator surface receptor uPAR |Human (Homo sapiens) [TaxId: 9606]
d2kvma_ : (LYS18) (SER40) [view usage] : b.34.13.2 |SH3-like barrel |Chromo domain-like |Chromo domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1v8cb2 : (VAL130) (SER164) [view usage] : d.129.5.1 |TBP-like |MoaD-related protein, C-terminal domain |MoaD-related protein, C-terminal domain |MoaD-related protein, C-terminal domain |Thermus thermophilus [TaxId: 274]
d1hqma_ : (PRO9) (SER46) [view usage] : i.8.1.1 |RNA polymerase |RNA polymerase |RNA polymerase |DNA-directed RNA polymerase alpha(2), beta, beta-prime and omega subunits |Thermus aquaticus [TaxId: 271]
d1htwa_ : (LEU70) (PHE97) [view usage] : c.37.1.18 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |YjeE-like |Hypothetical protein HI0065 |Haemophilus influenzae [TaxId: 727]
d1ms0a1 : (TYR545) (GLN570) [view usage] : b.29.1.15 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Trypanosoma sialidase, C-terminal domain |Trypanosoma sialidase, C-terminal domain |Trypanosoma cruzi [TaxId: 5693]
d1lxya_ : (VAL217) (ASN248) [view usage] : d.126.1.4 |Pentein, beta/alpha-propeller |Pentein |Arginine deiminase |Arginine deiminase |Mycoplasma arginini [TaxId: 2094]
d1a0sp_ : (GLY209) (SER241) [view usage] : f.4.3.2 |Transmembrane beta-barrels |Porins |Maltoporin-like |Sucrose-specific porin |Salmonella typhimurium [TaxId: 90371]
d2rera1 : (ASN92) (ARG153) [view usage] : d.129.3.6 |TBP-like |Bet v1-like |oligoketide cyclase/dehydrase-like |Multifunctional enzyme TcmN, cyclase/aromatase domain |Streptomyces glaucescens [TaxId: 1907]
d1duja_ : (GLN84) (LEU144) [view usage] : d.135.1.1 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |Human (Homo sapiens) [TaxId: 9606]
d3hxab_ : (GLU65) (MET103) [view usage] : d.74.1.1 |DCoH-like |PCD-like |PCD-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1go4a_ : (LEU84) (LEU142) [view usage] : d.135.1.1 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |Human (Homo sapiens) [TaxId: 9606]
d2gela2 : (ARG110) (VAL143) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Salmonella typhimurium [TaxId: 99287]
d1blle1 : (LYS50) (ARG90) [view usage] : c.50.1.1 |Macro domain-like |Macro domain-like |Leucine aminopeptidase (Aminopeptidase A), N-terminal domain |Leucine aminopeptidase (Aminopeptidase A), N-terminal domain |Cow (Bos taurus) [TaxId: 9913]
d1ms5a1 : (TYR545) (THR571) [view usage] : b.29.1.15 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Trypanosoma sialidase, C-terminal domain |Trypanosoma sialidase, C-terminal domain |Trypanosoma cruzi [TaxId: 5693]
d2d9qb1 : (HIS5) (GLN37) [view usage] : b.1.1.3 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C2 set domains |Granulocyte colony-stimulating factor (GC-SF) receptor, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2kkia_ : (PHE112) (PHE131) [view usage] : b.42.1.2 |beta-Trefoil |Cytokine |Interleukin-1 (IL-1) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1kxja_ : (SER165) (LEU198) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF |Thermotoga maritima [TaxId: 2336]
d1kxjb_ : (SER165) (LEU198) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF |Thermotoga maritima [TaxId: 2336]
d1dyqa2 : (GLN180) (ASN216) [view usage] : d.15.6.1 |beta-Grasp (ubiquitin-like) |Superantigen toxins, C-terminal domain |Superantigen toxins, C-terminal domain |Staphylococcal enterotoxin A, SEA |Staphylococcus aureus [TaxId: 1280]
d2izwb_ : (ARG114) (SER145) [view usage] : b.121.4.0 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |automated matches |automated matches |Ryegrass mottle virus [TaxId: 119910]
d2hgjp1 : (TYR26) (PHE58) [view usage] : d.41.4.2 |alpha/beta-Hammerhead |Ribosomal protein L16p/L10e |Ribosomal protein L16p |Ribosomal protein L16p |Thermus thermophilus [TaxId: 274]
d1smoa_ : (GLU27) (SER51) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |TREM-1 (triggering receptor expressed on myeloid cells 1) |Human (Homo sapiens) [TaxId: 9606]
d1roea_ : (ALA1) (GLU31) [view usage] : d.15.4.1 |beta-Grasp (ubiquitin-like) |2Fe-2S ferredoxin-like |2Fe-2S ferredoxin-related |2Fe-2S ferredoxin |Synechococcus elongatus [TaxId: 32046]
d1c4ka2 : (GLU532) (ASP569) [view usage] : c.67.1.5 |PLP-dependent transferase-like |PLP-dependent transferases |Ornithine decarboxylase major domain |Ornithine decarboxylase major domain |Lactobacillus sp., strain 30a [TaxId: 1591]
d1gpwb_ : (SER165) (SER197) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF |Thermotoga maritima [TaxId: 2336]
d1yq2a2 : (THR223) (VAL255) [view usage] : b.1.4.1 |Immunoglobulin-like beta-sandwich |beta-Galactosidase/glucuronidase domain |beta-Galactosidase/glucuronidase domain |beta-Galactosidase, domains 2 and 4 |Arthrobacter sp. c2-2 [TaxId: 192168]
d3zoyc_ : (GLY49) (LEU80) [view usage] : a.3.1.0 |Cytochrome c |Cytochrome c |automated matches |automated matches |Nitrosomonas europaea [TaxId: 915]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.67, d.58, c.108, b.29, d.129, c.23, f.4, c.37, c.55, b.121, b.6, c.57, b.1, d.126, b.42, c.50, d.87, d.41, b.34, a.3,
d.15, d.74, i.8, g.7, d.135