Tableau information
Concept source: d1f7ua3 amino acid (a.a.) range (LYS102)(LEU122)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS102) (GLY107) E1
(PRO108) (PHE114) E2
(PRO116) (LEU122) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 161.8° E2
H3 -123.5° -48.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3m7mx_ : (GLN8) (GLU35) [view usage] : d.193.1.1 |Hsp33 domain |Hsp33 domain |Hsp33 domain |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2w7ub_ : (TYR170) (ILE198) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Staphylococcus aureus [TaxId: 93061]
d1bev3_ : (ILE69) (SER97) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Bovine enterovirus coat proteins |Bovine enterovirus, VG-5-27 [TaxId: 12064]
d3l6ua_ : (ARG97) (GLY132) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Exiguobacterium sibiricum [TaxId: 262543]
d4ki4a2 : (LEU618) (LYS635) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
d1ipja1 : (LEU23) (SER41) [view usage] : b.82.1.2 |Double-stranded beta-helix |RmlC-like cupins |Germin/Seed storage 7S protein |Seed storage 7S protein |Soybean (Glycine max), beta-conglycinin beta subunit [TaxId: 3847]
d1rkba_ : (ASP45) (GLU64) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Adenylate kinase |Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]
d2vzea_ : (LYS186) (ALA201) [view usage] : e.23.1.0 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2k1ja_ : (ASP188) (GLY228) [view usage] : g.50.1.2 |FYVE/PHD zinc finger |FYVE/PHD zinc finger |PHD domain |Inhibitor of growth protein 4, Ing4 |Human (Homo sapiens) [TaxId: 9606]
d1gz3a1 : (SER447) (ASN482) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Mitochondrial NAD(P)-dependent malic enzyme |Human (Homo sapiens) [TaxId: 9606]
d1emsa2 : (VAL248) (ARG280) [view usage] : d.160.1.1 |Carbon-nitrogen hydrolase |Carbon-nitrogen hydrolase |Nitrilase |NIT-FHIT fusion protein, N-terminal domain |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d1nd1a_ : (VAL169) (THR191) [view usage] : d.92.1.9 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Reprolysin-like |Snake venom metalloprotease |Terciopelo (Bothrops asper), bap1 [TaxId: 8722]
d1qppb1 : (PRO55) (LYS77) [view usage] : b.1.11.1 |Immunoglobulin-like beta-sandwich |PapD-like |Pilus chaperone |Pilus chaperone PapD, N-domain |Escherichia coli [TaxId: 562]
d1nmua_ : (ASN241) (LYS273) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d3sp8a2 : (GLY186) (GLU210) [view usage] : g.14.1.1 |Kringle-like |Kringle-like |Kringle modules |NK1 fragment of hepatocyte growth factor |Human (Homo sapiens) [TaxId: 9606]
d1uija1 : (LEU22) (SER40) [view usage] : b.82.1.2 |Double-stranded beta-helix |RmlC-like cupins |Germin/Seed storage 7S protein |Seed storage 7S protein |Soybean (Glycine max), beta-conglycinin beta subunit [TaxId: 3847]
d2lhaa_ : (GLY368) (ASN396) [view usage] : b.7.1.2 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |Synaptotagmin-like (S variant) |Synaptogamin I |Human (Homo sapiens) [TaxId: 9606]
d3t2ca_ : (ARG203) (ALA226) [view usage] : d.280.1.1 |Sulfolobus fructose-1,6-bisphosphatase-like |Sulfolobus fructose-1,6-bisphosphatase-like |Sulfolobus fructose-1,6-bisphosphatase-like |automated matches |Thermoproteus neutrophilus [TaxId: 444157]
d3udoa_ : (GLY146) (ARG180) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Campylobacter jejuni [TaxId: 197]
d1mh6a_ : (GLY301) (SER326) [view usage] : d.32.1.2 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Antibiotic resistance proteins |Bleomycin resistance protein, BRP |Klebsiella pneumoniae [TaxId: 573]
d3shia_ : (SER239) (TYR260) [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Fibroblast collagenase (MMP-1) |Human (Homo sapiens) [TaxId: 9606]
d4mfba1 : (PRO59) (THR84) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
d2w12a_ : (VAL169) (ASN194) [view usage] : d.92.1.9 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Reprolysin-like |Snake venom metalloprotease |Terciopelo (Bothrops asper), bap1 [TaxId: 8722]
d3lbsa_ : (ASN241) (LYS273) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Escherichia coli [TaxId: 562]
d3zfec_ : (ARG70) (THR99) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |automated matches |Human enterovirus 71 [TaxId: 39054]
d1wcqa3 : (ASP131) (ASP166) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |automated matches |Micromonospora viridifaciens [TaxId: 1881]
d1i7fa_ : (GLN8) (ILE33) [view usage] : d.193.1.1 |Hsp33 domain |Hsp33 domain |Hsp33 domain |Heat shock protein 33, Hsp33 |Escherichia coli [TaxId: 562]
d2hs0a1 : (GLY55) (GLU79) [view usage] : d.79.4.1 |Bacillus chorismate mutase-like |PurM N-terminal domain-like |PurM N-terminal domain-like |Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 |Thermotoga maritima [TaxId: 2336]
d2b42b_ : (SER134) (GLY157) [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Bacillus circulans [TaxId: 1397]
d3rmbd2 : (LEU618) (LYS635) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
d4j2ea2 : (LEU618) (LYS635) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
d3rzuc_ : (GLN304) (GLY327) [view usage] : c.97.3.1 |Cytidine deaminase-like |JAB1/MPN domain |JAB1/MPN domain |Catalytic domain of AMSH |Human (Homo sapiens) [TaxId: 9606]
d1hova_ : (ILE141) (TYR162) [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |MMP-2 |Human (Homo sapiens) [TaxId: 9606]
d1t3na2 : (VAL119) (LEU143) [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |DNA polymerase iota |Human (Homo sapiens) [TaxId: 9606]
d1vzya1 : (TYR3) (HIS32) [view usage] : d.193.1.1 |Hsp33 domain |Hsp33 domain |Hsp33 domain |Heat shock protein 33, Hsp33 |Bacillus subtilis [TaxId: 1423]
d3qeta2 : (LEU618) (LYS635) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
d4iuaa2 : (GLY187) (GLU211) [view usage] : g.14.1.1 |Kringle-like |Kringle-like |Kringle modules |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1wdka4 : (LYS54) (LEU80) [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Fatty oxidation complex alpha subunit, N-terminal domain |Pseudomonas fragi [TaxId: 296]
d1n0la1 : (PRO55) (LEU78) [view usage] : b.1.11.1 |Immunoglobulin-like beta-sandwich |PapD-like |Pilus chaperone |Pilus chaperone PapD, N-domain |Escherichia coli [TaxId: 562]
d1a4yb_ : (ALA106) (PRO123) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Angiogenin |Human (Homo sapiens) [TaxId: 9606]
d4lrua_ : (GLU42) (VAL60) [view usage] : c.23.16.2 |Flavodoxin-like |Class I glutamine amidotransferase-like |DJ-1/PfpI |automated matches |Candida albicans [TaxId: 237561]
d1w2ca_ : (THR420) (ARG461) [view usage] : d.143.1.3 |SAICAR synthase-like |SAICAR synthase-like |Inositol polyphosphate kinase (IPK) |Inositol 1,4,5-trisphosphate 3-kinase A, IP3K A |Human (Homo sapiens) [TaxId: 9606]
d1dpza_ : (ARG144) (ARG176) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |3-isopropylmalate dehydrogenase, IPMDH |Thermus thermophilus [TaxId: 274]
d1cl6a_ : (ASP302) (ASP321) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450-NOR, nitric reductase |Fungus (Fusarium oxysporum) [TaxId: 5507]
d1hw7a_ : (GLN8) (GLU35) [view usage] : d.193.1.1 |Hsp33 domain |Hsp33 domain |Hsp33 domain |Heat shock protein 33, Hsp33 |Escherichia coli [TaxId: 562]
d3vboc_ : (ARG70) (THR99) [view usage] : b.121.4.0 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |automated matches |automated matches |Human enterovirus 71 [TaxId: 39054]
d1t0ba_ : (LEU119) (HIS137) [view usage] : c.23.16.6 |Flavodoxin-like |Class I glutamine amidotransferase-like |ThuA-like |GK2113 homologue |Bacillus stearothermophilus [TaxId: 1422]
d1klta_ : (GLY196) (ASN245) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Chymase (mast cell protease I) |Human (Homo sapiens) [TaxId: 9606]
d3rzua_ : (GLN304) (GLY327) [view usage] : c.97.3.1 |Cytidine deaminase-like |JAB1/MPN domain |JAB1/MPN domain |Catalytic domain of AMSH |Human (Homo sapiens) [TaxId: 9606]
d3hn4a2 : (GLY186) (GLU210) [view usage] : g.14.1.1 |Kringle-like |Kringle-like |Kringle modules |NK1 fragment of hepatocyte growth factor |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, e.8, b.82, c.94, a.104, c.2, b.29, b.47, d.92, c.77, c.93, c.14, c.23, c.37, b.121, d.32, d.160, b.1, e.23, c.97,
d.143, d.79, d.67, d.5, d.193, b.7, d.280, g.14, g.50