Tableau information
Concept source: d1gp7a_ amino acid (a.a.) range (TYR73)(SER109)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(TYR73) (GLU79) E1
(ARG80) (CYS84) E2
(GLU90) (SER109) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 154.9° E2
H3 -31.4° -161.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4mata_ : (ILE93) (VAL140) [view usage] : d.127.1.1 |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Methionine aminopeptidase |Escherichia coli [TaxId: 562]
d1wgsa_ : (GLN35) (TRP61) [view usage] : b.34.13.3 |SH3-like barrel |Chromo domain-like |Chromo barrel domain |Probable histone acetyltransferase MYST1 |Mouse (Mus musculus) [TaxId: 10090]
d2onfb_ : (LYS70) (ILE109) [view usage] : d.227.1.1 |OsmC-like |OsmC-like |Ohr/OsmC resistance proteins |Hypothetical protein Ta0195 |Thermoplasma acidophilum [TaxId: 2303]
d2plsa1 : (ALA345) (THR367) [view usage] : d.145.1.4 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CorC/HlyC domain-like |Hypothetical protein CT0541 |Chlorobium tepidum [TaxId: 1097]
d2vkia_ : (TYR415) (GLY445) [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2f5va2 : (MET380) (GLN418) [view usage] : d.16.1.1 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |GMC oxidoreductases |Pyranose 2-oxidase |White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
d3g0ma_ : (GLN54) (TYR89) [view usage] : d.224.1.1 |SufE/NifU |SufE/NifU |SufE-like |automated matches |Salmonella typhimurium [TaxId: 99287]
d1onsa_ : (GLY248) (ALA281) [view usage] : c.23.16.2 |Flavodoxin-like |Class I glutamine amidotransferase-like |DJ-1/PfpI |HSP31 (HchA; YedU) |Escherichia coli [TaxId: 562]
d1y1oa_ : (ASP86) (GLY129) [view usage] : c.52.1.28 |Restriction endonuclease-like |Restriction endonuclease-like |RecU-like |Recombination protein U (RecU)/PBP related factor A (PrfA) |Bacillus stearothermophilus [TaxId: 1422]
d3q1td_ : (SER16) (ASP49) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium avium [TaxId: 243243]
d2f6ca2 : (MET380) (GLN418) [view usage] : d.16.1.1 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |GMC oxidoreductases |Pyranose 2-oxidase |White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
d1xkna_ : (MSE221) (MSE256) [view usage] : d.126.1.6 |Pentein, beta/alpha-propeller |Pentein |Porphyromonas-type peptidylarginine deiminase |Putative peptidyl-arginine deiminase |Chlorobium tepidum [TaxId: 1097]
d1tljb_ : (SER51) (SER88) [view usage] : d.282.1.1 |SSo0622-like |SSo0622-like |SSo0622-like |Hypothetical protein SSo0622 |Sulfolobus solfataricus [TaxId: 2287]
d1lpab2 : (THR36) (SER62) [view usage] : c.69.1.19 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Pancreatic lipase, N-terminal domain |Pancreatic lipase, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2h72b_ : (PRO76) (LEU107) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Escherichia coli [TaxId: 562]
d2yaya_ : (CYS120) (TYR152) [view usage] : a.204.1.0 |all-alpha NTP pyrophosphatases |all-alpha NTP pyrophosphatases |automated matches |automated matches |Leishmania major [TaxId: 5664]
d2gj9b_ : (VAL254) (ALA296) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Escherichia coli [TaxId: 469008]
d1kvya_ : (TYR73) (LYS108) [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Phospholipase A2 |Cow (Bos taurus), pancreas [TaxId: 9913]
d1fiqb2 : (LYS225) (HIS252) [view usage] : d.145.1.3 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CO dehydrogenase flavoprotein N-terminal domain-like |Xanthine oxidase, domain 3 (?) |Cow (Bos taurus) [TaxId: 9913]
d1g2ia_ : (GLU138) (LYS166) [view usage] : c.23.16.2 |Flavodoxin-like |Class I glutamine amidotransferase-like |DJ-1/PfpI |Intracellular protease |Pyrococcus horikoshii [TaxId: 53953]
d2kx3a_ : (MET5) (LEU35) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3q1tf_ : (LEU17) (ASP49) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium avium [TaxId: 243243]
d2kfba1 : (GLN1) (SER31) [view usage] : b.11.1.1 |gamma-Crystallin-like |gamma-Crystallin-like |Crystallins/Ca-binding development proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3hvma_ : (GLY86) (GLY126) [view usage] : d.126.1.6 |Pentein, beta/alpha-propeller |Pentein |Porphyromonas-type peptidylarginine deiminase |Putative peptidyl-arginine deiminase |Helicobacter pylori J99 [TaxId: 85963]
d2cmua1 : (GLY88) (GLY128) [view usage] : d.126.1.6 |Pentein, beta/alpha-propeller |Pentein |Porphyromonas-type peptidylarginine deiminase |Putative peptidyl-arginine deiminase |Helicobacter pylori J99 [TaxId: 85963]
d2yb0a_ : (CYS120) (TYR152) [view usage] : a.204.1.0 |all-alpha NTP pyrophosphatases |all-alpha NTP pyrophosphatases |automated matches |automated matches |Leishmania major [TaxId: 5664]
d1pv2h_ : (GLY249) (TYR281) [view usage] : c.23.16.2 |Flavodoxin-like |Class I glutamine amidotransferase-like |DJ-1/PfpI |HSP31 (HchA; YedU) |Escherichia coli [TaxId: 562]
d2a7kh_ : (MET1) (ASP42) [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Carbapenem biosynthes protein CarB |Pectobacterium carotovorum [TaxId: 554]
d5ptda_ : (THR183) (SER222) [view usage] : c.1.18.2 |TIM beta/alpha-barrel |PLC-like phosphodiesterases |Bacterial PLC |Phosphatidylinositol-specific phospholipase C |Bacillus cereus [TaxId: 1396]
d4nbsa1 : (LYS48) (MET111) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Sulfolobus solfataricus [TaxId: 2287]
d3tkpa_ : (GLY205) (ASN234) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1hpla2 : (THR36) (SER62) [view usage] : c.69.1.19 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Pancreatic lipase, N-terminal domain |Pancreatic lipase, N-terminal domain |Horse (Equus caballus) [TaxId: 9796]
d3sbcd_ : (GLY165) (ALA193) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1w1da_ : (TYR415) (ASN446) [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |3-phosphoinositide dependent protein kinase-1 |Human (Homo sapiens) [TaxId: 9606]
d1h4ax1 : (GLY1) (SER30) [view usage] : b.11.1.1 |gamma-Crystallin-like |gamma-Crystallin-like |Crystallins/Ca-binding development proteins |gamma-Crystallin |Human (Homo sapiens), isoform D [TaxId: 9606]
d1n57a_ : (GLY249) (ALA282) [view usage] : c.23.16.2 |Flavodoxin-like |Class I glutamine amidotransferase-like |DJ-1/PfpI |HSP31 (HchA; YedU) |Escherichia coli [TaxId: 562]
d2ftxb1 : (ASP177) (LYS213) [view usage] : d.300.1.2 |Kinetochore globular domain-like |Kinetochore globular domain |Spc24-like |Kinetochore protein Spc24 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2gnpa1 : (VAL239) (THR262) [view usage] : c.124.1.8 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |SorC sugar-binding domain-like |Transcriptional regulator SP0247 |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d3hjea1 : (LYS250) (THR280) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
d2i81b_ : (GLY167) (LEU195) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Plasmodium vivax [TaxId: 126793]
d2hrfa_ : (ILE262) (ARG295) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1jg5a_ : (PRO1) (GLY32) [view usage] : d.205.1.1 |GTP cyclohydrolase I feedback regulatory protein, GFRP |GTP cyclohydrolase I feedback regulatory protein, GFRP |GTP cyclohydrolase I feedback regulatory protein, GFRP |GTP cyclohydrolase I feedback regulatory protein, GFRP |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2aa4a2 : (VAL125) (ALA187) [view usage] : c.55.1.10 |Ribonuclease H-like motif |Actin-like ATPase domain |ROK |N-acetylmannosamine kinase NanK |Escherichia coli [TaxId: 562]
d1oz6a_ : (TYR73) (ASN109) [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Saw-scaled viper (Echis carinatus) [TaxId: 40353]
d4v192_ : (ARG166) (LYS199) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, mitochondrial (54S or 39S subunit) |Pig (Sus scrofa) [TaxId: 9823]
d2nvva2 : (LYS420) (CYS447) [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Porphyromonas gingivalis [TaxId: 242619]
d2b7jb_ : (VAL237) (TYR276) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Thioredoxin-like protein Sco1 (YpmQ), soluble domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1t0bf_ : (CYS183) (ALA222) [view usage] : c.23.16.6 |Flavodoxin-like |Class I glutamine amidotransferase-like |ThuA-like |GK2113 homologue |Bacillus stearothermophilus [TaxId: 1422]
d1yl3r1 : (GLY18) (LEU42) [view usage] : g.39.1.6 |Glucocorticoid receptor-like (DNA-binding domain) |Glucocorticoid receptor-like (DNA-binding domain) |Ribosomal protein L24e |Ribosomal protein L24e |Haloarcula marismortui [TaxId: 2238]
d2g5fa1 : (THR139) (GLY168) [view usage] : d.161.1.1 |ADC synthase |ADC synthase |ADC synthase |Salicylate synthase MbtI |Mycobacterium tuberculosis [TaxId: 1773]
d1xnza_ : (ILE93) (VAL140) [view usage] : d.127.1.1 |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Methionine aminopeptidase |Escherichia coli [TaxId: 562]
d1kvxa_ : (TYR73) (LYS108) [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Phospholipase A2 |Cow (Bos taurus), pancreas [TaxId: 9913]
d3rl7f_ : (MET219) (ILE253) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1tzla2 : (MSE380) (GLN418) [view usage] : d.16.1.1 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |GMC oxidoreductases |Pyranose 2-oxidase |White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
d3jstb_ : (GLU61) (GLY97) [view usage] : d.74.1.0 |DCoH-like |PCD-like |automated matches |automated matches |Brucella melitensis [TaxId: 29459]
d4dala_ : (HIS343) (ARG376) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d2xzm2_ : (GLY126) (LYS155) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Tetrahymena thermophila [TaxId: 5911]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.69, i.1, c.82, c.124, c.14, c.23, c.37, c.47, c.55, d.127, d.126, b.55, c.52, b.34, d.145, b.11, d.15, d.16, d.74,
d.227, a.133, d.224, b.36, a.204, g.39, d.161, d.205, d.300, d.282