Tableau information
Concept source: d2ayta1 amino acid (a.a.) range (PRO83)(ARG119)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO83) (GLU88) E1
(ILE95) (GLY99) E2
(GLU105) (ARG119) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 162.1° E2
H3 25.4° -158.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2g0ja_ : (SER0) (ASP52) [view usage] : d.64.2.1 |eIF1-like |TM1457-like |TM1457-like |Hypothetical protein Smu.848 |Streptococcus mutans [TaxId: 1309]
d1ovta1 : (GLU223) (ASN243) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Ovotransferrin |Chicken (Gallus gallus) [TaxId: 9031]
d1i7qb_ : (MET157) (LEU193) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |Anthranilate synthase GAT subunit, TrpG |Serratia marcescens [TaxId: 615]
d3gkxa_ : (PRO96) (LYS117) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Bacteroides fragilis [TaxId: 272559]
d2g0jb_ : (ILE2) (ASN45) [view usage] : d.64.2.1 |eIF1-like |TM1457-like |TM1457-like |Hypothetical protein Smu.848 |Streptococcus mutans [TaxId: 1309]
d4l4zb_ : (VAL241) (LEU265) [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Escherichia coli [TaxId: 83333]
d4hs5a_ : (VAL58) (SER97) [view usage] : d.82.2.0 |N domain of copper amine oxidase-like |Frataxin/Nqo15-like |automated matches |automated matches |Psychromonas ingrahamii [TaxId: 357804]
d3dxoa1 : (ASN34) (PHE61) [view usage] : d.17.4.19 |Cystatin-like |NTF2-like |Atu0744-like |Uncharacterized protein Atu0744 |Agrobacterium tumefaciens [TaxId: 358]
d1r7ha_ : (PRO52) (LEU72) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Glutaredoxin-like NRDH-redoxin |Corynebacterium ammoniagenes [TaxId: 1697]
d2b1lb_ : (GLU145) (GLN185) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Escherichia coli [TaxId: 562]
d1nhja2 : (THR186) (ILE215) [view usage] : d.122.1.2 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |DNA gyrase/MutL, N-terminal domain |DNA mismatch repair protein MutL |Escherichia coli [TaxId: 562]
d1nw3a_ : (LEU7) (ILE48) [view usage] : c.66.1.31 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Catalytic, N-terminal domain of histone methyltransferase Dot1l |Catalytic, N-terminal domain of histone methyltransferase Dot1l |Human (Homo sapiens) [TaxId: 9606]
d3uwpa_ : (LEU7) (PRO49) [view usage] : c.66.1.31 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Catalytic, N-terminal domain of histone methyltransferase Dot1l |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3i78a_ : (PHE29) (SER60) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Trypsin |Streptomyces griseus, strain k1 [TaxId: 1911]
d4l4za_ : (VAL241) (LEU265) [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Escherichia coli [TaxId: 83333]
d1hyua3 : (PRO63) (GLY99) [view usage] : c.47.1.2 |Thioredoxin fold |Thioredoxin-like |PDI-like |Alkyl hydroperoxide reductase subunit F (AhpF), N-terminal domain |Salmonella typhimurium [TaxId: 90371]
d4lp1a_ : (VAL58) (GLN96) [view usage] : d.82.2.0 |N domain of copper amine oxidase-like |Frataxin/Nqo15-like |automated matches |automated matches |Psychromonas ingrahamii [TaxId: 357804]
d3mm5a3 : (ALA270) (MET295) [view usage] : d.58.1.5 |Ferredoxin-like |4Fe-4S ferredoxins |Ferredoxin domains from multidomain proteins |DsrA insert domain |Archaeoglobus fulgidus [TaxId: 2234]
d2fug71 : (ARG81) (ALA127) [view usage] : d.82.2.2 |N domain of copper amine oxidase-like |Frataxin/Nqo15-like |Nqo15-like |NADH-quinone oxidoreductase subunit 15, Nqo15 |Thermus thermophilus [TaxId: 274]
d3lj8a_ : (ASN242) (ASN283) [view usage] : c.45.1.1 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Dual specificity phosphatase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3gfka_ : (PRO93) (LEU114) [view usage] : c.47.1.12 |Thioredoxin fold |Thioredoxin-like |ArsC-like |automated matches |Bacillus subtilis [TaxId: 1423]
d1s12c_ : (ILE202) (LYS241) [view usage] : d.64.2.1 |eIF1-like |TM1457-like |TM1457-like |Hypothetical protein TM1457 |Thermotoga maritima [TaxId: 2336]
d1b62a2 : (THR186) (ILE215) [view usage] : d.122.1.2 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |DNA gyrase/MutL, N-terminal domain |DNA mismatch repair protein MutL |Escherichia coli [TaxId: 562]
d2ey4a2 : (GLU76) (ALA109) [view usage] : d.265.1.2 |Pseudouridine synthase |Pseudouridine synthase |Pseudouridine synthase II TruB |Pseudouridine synthase II TruB |Pyrococcus furiosus [TaxId: 2261]
d2lxna_ : (GLU148) (CYS183) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |automated matches |Methanocaldococcus jannaschii [TaxId: 243232]
d1b63a2 : (THR186) (ILE215) [view usage] : d.122.1.2 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |DNA gyrase/MutL, N-terminal domain |DNA mismatch repair protein MutL |Escherichia coli [TaxId: 562]
d2kkia_ : (SER31) (VAL52) [view usage] : b.42.1.2 |beta-Trefoil |Cytokine |Interleukin-1 (IL-1) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3vpda2 : (VAL126) (GLY159) [view usage] : d.142.1.7 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |Lysine biosynthesis enzyme LysX ATP-binding domain |automated matches |Thermus thermophilus [TaxId: 274]
d2b1la_ : (GLU145) (ALA184) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Escherichia coli [TaxId: 562]
d2idlb_ : (ILE2) (GLY53) [view usage] : d.64.2.1 |eIF1-like |TM1457-like |TM1457-like |automated matches |Streptococcus pneumoniae [TaxId: 170187]
d1s12a_ : (ILE2) (LYS41) [view usage] : d.64.2.1 |eIF1-like |TM1457-like |TM1457-like |Hypothetical protein TM1457 |Thermotoga maritima [TaxId: 2336]
d2eqba_ : (GLY54) (ALA93) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3rdwb_ : (PRO96) (ILE116) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Yersinia pestis [TaxId: 214092]
d2idla1 : (MET1) (GLY53) [view usage] : d.64.2.1 |eIF1-like |TM1457-like |TM1457-like |Hypothetical protein SP1106 |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1wnja_ : (ILE28) (CYS55) [view usage] : d.109.1.2 |Gelsolin-like |Actin depolymerizing proteins |Cofilin-like |Coactosin-like protein Cotl1 (Clp) |Human (Homo sapiens) [TaxId: 9606]
d1khea2 : (THR138) (THR174) [view usage] : c.109.1.1 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) |Human (Homo sapiens) [TaxId: 9606]
d3gkxb_ : (PRO96) (LYS117) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Bacteroides fragilis [TaxId: 272559]
d1ieja_ : (GLU223) (ASN243) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Ovotransferrin |Chicken (Gallus gallus) [TaxId: 9031]
d2esla1 : (THR37) (GLY76) [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin (eukaryotic) |Human (Homo sapiens), variant C [TaxId: 9606]
d3nrma_ : (ARG251) (GLY291) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Aurora-related kinase 1 (aurora-2) |Human (Homo sapiens) [TaxId: 9606]
d2ey4b2 : (GLU76) (ALA109) [view usage] : d.265.1.2 |Pseudouridine synthase |Pseudouridine synthase |Pseudouridine synthase II TruB |Pseudouridine synthase II TruB |Pyrococcus furiosus [TaxId: 2261]
d1zkca1 : (GLY280) (PHE307) [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Peptidyl-prolyl cis-trans isomerase-like 2, Cyclophilin-60, PPI domain |Human (Homo sapiens) [TaxId: 9606]
d1z6ma1 : (PRO148) (LYS172) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |Hypothetical protein EF0770 |Enterococcus faecalis [TaxId: 1351]
d3mjfa2 : (ILE142) (ALA173) [view usage] : d.142.1.2 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |BC ATP-binding domain-like |automated matches |Yersinia pestis [TaxId: 214092]
d2a4ha1 : (VAL117) (LEU148) [view usage] : c.47.1.23 |Thioredoxin fold |Thioredoxin-like |Selenoprotein W-related |Selenoprotein sep15 |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d4lhxa_ : (GLY42) (ALA81) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Rab8a |Human (Homo sapiens) [TaxId: 9606]
d1rw1a_ : (PRO93) (ALA113) [view usage] : c.47.1.12 |Thioredoxin fold |Thioredoxin-like |ArsC-like |Hypothetical protein PA3664 (YffB) |Pseudomonas aeruginosa [TaxId: 287]
d3rpna_ : (PRO184) (GLY211) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1gsaa2 : (ASP156) (THR186) [view usage] : d.142.1.1 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |ATP-binding domain of peptide synthetases |Prokaryotic glutathione synthetase, C-domain |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94, d.58, b.47, c.66, c.124, c.45, d.122, c.23, d.144, c.37, c.47, b.42, d.17, c.109, b.62, d.142, d.109, d.82, d.64, d.265