Tableau information
Concept source: d2vhla2 amino acid (a.a.) range (GLN298)(PHE331)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN298) (GLY304) E1
(ARG305) (LEU309) E2
(LYS320) (PHE331) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 154.7° E2
H3 58.9° -109.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2xhta_ : (GLU178) (GLU200) [view usage] : d.122.1.1 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |Heat shock protein 90, HSP90, N-terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ylna1 : (CYS207) (LEU237) [view usage] : b.45.2.1 |Split barrel-like |PilZ domain-like |PilZ domain |Hypothetical protein VCA0042, C-terminal domain |Vibrio cholerae [TaxId: 666]
d1m3dc2 : (LEU141) (LEU162) [view usage] : d.169.1.6 |C-type lectin-like |C-type lectin-like |Noncollagenous (NC1) domain of collagen IV |Noncollagenous (NC1) domain of collagen IV |Cow (Bos taurus) [TaxId: 9913]
d1ur5c2 : (PRO268) (SER308) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |Malate dehydrogenase |Chloroflexus aurantiacus [TaxId: 1108]
d1uw5d_ : (GLU46) (LEU75) [view usage] : d.129.3.4 |TBP-like |Bet v1-like |Phoshatidylinositol transfer protein, PITP |Phoshatidylinositol transfer protein, PITP |Human (Homo sapiens) [TaxId: 9606]
d3ldha_ : (PRO290) (GLN326) [view usage] : i.12.1.1 |Proteins of incorrect, partial and unknown sequence |Proteins of incorrect, partial and unknown sequence |Proteins of incorrect, partial and unknown sequence |Lactate dehydrogenase |Dogfish (Squalus acanthias) [TaxId: 7797]
d2bvfa1 : (ALA7) (ASN29) [view usage] : d.145.1.1 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |FAD-linked oxidases, N-terminal domain |6-hydroxy-d-nicotine oxidase |Arthrobacter nicotinovorans [TaxId: 29320]
d1ui7a1 : (ASP454) (VAL484) [view usage] : b.30.2.1 |Supersandwich |Amine oxidase catalytic domain |Amine oxidase catalytic domain |Copper amine oxidase, domain 3 |Arthrobacter globiformis [TaxId: 1665]
d1m3db2 : (VAL144) (LEU165) [view usage] : d.169.1.6 |C-type lectin-like |C-type lectin-like |Noncollagenous (NC1) domain of collagen IV |Noncollagenous (NC1) domain of collagen IV |Cow (Bos taurus) [TaxId: 9913]
d2je6b2 : (LEU160) (TRP184) [view usage] : d.101.1.1 |Ribonuclease PH domain 2-like |Ribonuclease PH domain 2-like |Ribonuclease PH domain 2-like |Exosome complex exonuclease 1, ECX1 |Sulfolobus solfataricus [TaxId: 2287]
d1c3ga2 : (SER306) (ALA347) [view usage] : b.4.1.1 |HSP40/DnaJ peptide-binding domain |HSP40/DnaJ peptide-binding domain |HSP40/DnaJ peptide-binding domain |Heat shock protein 40 Sis1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4psxa_ : (SER173) (ASP208) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Histone acetyltransferase HAT1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1puua_ : (ASN215) (LEU240) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Mistletoe lectin I A-chain |European mistletoe (Viscum album) [TaxId: 3972]
d3zzfd_ : (GLY274) (GLN299) [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1prya_ : (ARG39) (ASN64) [view usage] : c.66.1.3 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Fibrillarin homologue |Fibrillarin homologue |Pyrococcus furiosus [TaxId: 2261]
d2br2b2 : (ALA162) (TRP184) [view usage] : d.101.1.1 |Ribonuclease PH domain 2-like |Ribonuclease PH domain 2-like |Ribonuclease PH domain 2-like |Exosome complex exonuclease 1, ECX1 |Sulfolobus solfataricus [TaxId: 2287]
d1ce7a_ : (ASN210) (LEU234) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Mistletoe lectin I A-chain |European mistletoe (Viscum album) [TaxId: 3972]
d1li1c2 : (LEU144) (LEU165) [view usage] : d.169.1.6 |C-type lectin-like |C-type lectin-like |Noncollagenous (NC1) domain of collagen IV |Noncollagenous (NC1) domain of collagen IV |Human (Homo sapiens) [TaxId: 9606]
d3vi3a1 : (GLY133) (CYS164) [view usage] : b.69.8.0 |7-bladed beta-propeller |Integrin alpha N-terminal domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2yvla_ : (GLY47) (LEU65) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Aquifex aeolicus [TaxId: 224324]
d3s8ra_ : (THR625) (ARG664) [view usage] : d.153.1.2 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Penicillin acylase, catalytic domain |Cephalosporin acylase |Pseudomonas sp., glutarylamidase [TaxId: 306]
d1t47a1 : (ALA62) (GLU95) [view usage] : d.32.1.3 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Extradiol dioxygenases |4-hydroxyphenylpyruvate dioxygenase, HppD |Streptomyces avermitilis [TaxId: 33903]
d2ckfa1 : (ALA97) (HIS124) [view usage] : b.33.1.0 |ISP domain |ISP domain |automated matches |automated matches |Sphingomonas sp. [TaxId: 279135]
d1pyya4 : (GLY422) (SER448) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |Penicillin-binding protein 2x (pbp-2x), transpeptidase domain |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1n8ja_ : (GLY162) (LYS185) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Alkyl hydroperoxide reductase AhpC |Salmonella typhimurium [TaxId: 90371]
d2mlla_ : (ASN210) (LEU234) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Mistletoe lectin I A-chain |European mistletoe (Viscum album) [TaxId: 3972]
d3v3zl_ : (ASP23) (GLY57) [view usage] : f.26.1.1 |Bacterial photosystem II reaction centre, L and M subunits |Bacterial photosystem II reaction centre, L and M subunits |Bacterial photosystem II reaction centre, L and M subunits |L (light) subunit |Rhodobacter sphaeroides [TaxId: 1063]
d1oqla_ : (ASN215) (LEU240) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Mistletoe lectin I A-chain |European mistletoe (Viscum album) [TaxId: 3972]
d2gbwa1 : (ALA97) (HIS124) [view usage] : b.33.1.0 |ISP domain |ISP domain |automated matches |automated matches |Sphingobium yanoikuyae [TaxId: 13690]
d1uw5a_ : (GLU46) (LEU75) [view usage] : d.129.3.4 |TBP-like |Bet v1-like |Phoshatidylinositol transfer protein, PITP |Phoshatidylinositol transfer protein, PITP |Human (Homo sapiens) [TaxId: 9606]
d1hufa_ : (ASP89) (SER125) [view usage] : d.195.1.1 |YopH tyrosine phosphatase N-terminal domain |YopH tyrosine phosphatase N-terminal domain |YopH tyrosine phosphatase N-terminal domain |YopH tyrosine phosphatase N-terminal domain |Yersinia pestis [TaxId: 632]
d2c38v2 : (LEU160) (TRP184) [view usage] : d.101.1.1 |Ribonuclease PH domain 2-like |Ribonuclease PH domain 2-like |Ribonuclease PH domain 2-like |Exosome complex exonuclease 1, ECX1 |Sulfolobus solfataricus [TaxId: 2287]
d3hdpa_ : (GLN42) (LYS68) [view usage] : d.32.1.0 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |automated matches |automated matches |Clostridium acetobutylicum [TaxId: 1488]
d3bbns1 : (THR48) (HIS69) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, chloroplast (70S ribosome functional complex) |Spinach (Spinacia oleracea) [TaxId: 3562]
d1g0u1_ : (GLY117) (MET133) [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome beta subunit (catalytic) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4eb2a_ : (ASN215) (LEU240) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |automated matches |European mistletoe (Viscum album) [TaxId: 3972]
d2cexa_ : (HIS209) (LEU226) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Sialic acid-binding protein SiaP |Haemophilus influenzae [TaxId: 727]
d4pswa_ : (SER173) (ASP208) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Histone acetyltransferase HAT1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1k7ja_ : (ASN96) (GLY137) [view usage] : d.115.1.1 |YrdC/RibB |YrdC/RibB |YrdC-like |Hypothetical protein YciO |Escherichia coli [TaxId: 562]
d1td6a_ : (VAL177) (LEU219) [view usage] : a.234.1.1 |Hypothetical protein MPN330 |Hypothetical protein MPN330 |Hypothetical protein MPN330 |Hypothetical protein MPN330 |Mycoplasma pneumoniae [TaxId: 2104]
d1ulia1 : (SER115) (PRO142) [view usage] : b.33.1.2 |ISP domain |ISP domain |Ring hydroxylating alpha subunit ISP domain |Biphenyl dioxygenase large subunit BphA1, N-terminal domain |Rhodococcus sp. RHA1 [TaxId: 101510]
d3s8rb_ : (THR625) (ALA665) [view usage] : d.153.1.2 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Penicillin acylase, catalytic domain |Cephalosporin acylase |Pseudomonas sp., glutarylamidase [TaxId: 306]
d4aj1a2 : (PRO291) (LEU329) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3dbrb_ : (SER378) (ARG403) [view usage] : c.111.1.2 |Activating enzymes of the ubiquitin-like proteins |Activating enzymes of the ubiquitin-like proteins |Ubiquitin activating enzymes (UBA) |UBA3 |Human (Homo sapiens) [TaxId: 9606]
d3zs3a_ : (GLN145) (CYS193) [view usage] : b.25.1.0 |Osmotin, thaumatin-like protein |Osmotin, thaumatin-like protein |automated matches |automated matches |Malus x [TaxId: 3750]
d1xupo1 : (THR86) (ILE112) [view usage] : c.55.1.4 |Ribonuclease H-like motif |Actin-like ATPase domain |Glycerol kinase |Glycerol kinase |Enterococcus casseliflavus [TaxId: 37734]
d4e57a_ : (THR621) (ALA661) [view usage] : d.153.1.2 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Penicillin acylase, catalytic domain |automated matches |Pseudomonas sp. [TaxId: 81841]
d1enua_ : (ASN290) (ASP310) [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 542]
d1xjta_ : (ASP47) (ARG97) [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Endolysin Lyz |Bacteriophage P1 [TaxId: 10678]
d1o22a_ : (ASP101) (LYS123) [view usage] : d.238.1.1 |Hypothetical protein TM0875 |Hypothetical protein TM0875 |Hypothetical protein TM0875 |Hypothetical protein TM0875 |Thermotoga maritima [TaxId: 2336]
d2mf2a_ : (ASP18) (TYR49) [view usage] : b.34.6.2 |SH3-like barrel |Cell growth inhibitor/plasmid maintenance toxic component |Kid/PemK |automated matches |Staphylococcus aureus [TaxId: 1280]
d1g8aa_ : (ARG39) (ASN64) [view usage] : c.66.1.3 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Fibrillarin homologue |Fibrillarin homologue |Pyrococcus horikoshii [TaxId: 53953]
d1zpsa1 : (ILE25) (GLU52) [view usage] : b.168.1.1 |HisI-like |HisI-like |HisI-like |Phosphoribosyl-AMP cyclohydrolase HisI |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1h0ha2 : (THR13) (GLU50) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Tungsten containing formate dehydrogenase, large subunit |Desulfovibrio gigas [TaxId: 879]
d1t8ha_ : (PRO127) (GLY151) [view usage] : d.194.1.2 |CNF1/YfiH-like putative cysteine hydrolases |CNF1/YfiH-like putative cysteine hydrolases |YfiH-like |Hypothetical protein YlmD |Bacillus stearothermophilus [TaxId: 1422]
d2xdxa_ : (GLU178) (GLU199) [view usage] : d.122.1.1 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |Heat shock protein 90, HSP90, N-terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1wesa_ : (GLY27) (GLY64) [view usage] : g.50.1.2 |FYVE/PHD zinc finger |FYVE/PHD zinc finger |PHD domain |PHD Inhibitor of growth protein 2, Ing2 |Mouse (Mus musculus) [TaxId: 10090]
d1jnda2 : (ASN281) (LEU325) [view usage] : d.26.3.1 |FKBP-like |Chitinase insertion domain |Chitinase insertion domain |Imaginal disc growth factor-2 |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d2qh0a_ : (ILE43) (LYS70) [view usage] : d.32.1.0 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |automated matches |automated matches |Clostridium acetobutylicum [TaxId: 1488]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.3, c.1, c.81, c.94, b.69, i.1, b.30, c.66, d.165, d.129, d.122, c.47, c.55, d.2, d.153, d.169, d.194, f.26, d.32, b.45,
d.108, c.73, c.111, b.25, b.34, d.145, i.12, d.162, d.26, b.33, d.101, b.4, a.234, d.115, g.50, d.195, d.238, b.168