Tableau information
Concept source: d2msna_ amino acid (a.a.) range (ILE177)(THR205)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ILE177) (ASN181) E1
(GLY189) (ILE193) E2
(ALA195) (THR205) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -20.3° E2
H3 133.1° 131.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2oorc_ : (GLY158) (MET202) [view usage] : c.31.1.4 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Transhydrogenase domain III (dIII) |Transhydrogenase domain III (dIII) |Rhodospirillum rubrum [TaxId: 1085]
d4odxx_ : (ILE12) (GLY43) [view usage] : d.112.1.1 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |IIA domain of mannitol-specific and ntr phosphotransferase EII |automated matches |Artificial gene [TaxId: 32630]
d3o3ga_ : (SER102) (SER127) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |automated matches |Thermotoga maritima [TaxId: 2336]
d1xltf_ : (GLY419) (ASN464) [view usage] : c.31.1.4 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Transhydrogenase domain III (dIII) |Transhydrogenase domain III (dIII) |Rhodospirillum rubrum [TaxId: 1085]
d1di0c_ : (VAL109) (ALA154) [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Brucella abortus [TaxId: 235]
d1djla_ : (LYS993) (SER1040) [view usage] : c.31.1.4 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Transhydrogenase domain III (dIII) |Transhydrogenase domain III (dIII) |Human (Homo sapiens) [TaxId: 9606]
d2vfwa_ : (ASP207) (ARG256) [view usage] : c.101.1.0 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d1qaxa1 : (MET172) (GLY206) [view usage] : d.58.20.1 |Ferredoxin-like |NAD-binding domain of HMG-CoA reductase |NAD-binding domain of HMG-CoA reductase |NAD-binding domain of HMG-CoA reductase |Pseudomonas mevalonii [TaxId: 32044]
d1biha2 : (ILE133) (SER174) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Hemolin |Moth (Hyalophora cecropia) [TaxId: 7123]
d2vg1a_ : (ASP207) (ARG256) [view usage] : c.101.1.0 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d3qasa_ : (ASP190) (ARG239) [view usage] : c.101.1.1 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2a1tr2 : (LYS294) (LYS331) [view usage] : c.31.1.0 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1i6wa_ : (LEU124) (LEU159) [view usage] : c.69.1.18 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Bacterial lipase |Lipase A |Bacillus subtilis [TaxId: 1423]
d1di0d_ : (VAL109) (ILE153) [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Brucella abortus [TaxId: 235]
d4odxy_ : (ILE12) (GLY43) [view usage] : d.112.1.1 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |IIA domain of mannitol-specific and ntr phosphotransferase EII |automated matches |Artificial gene [TaxId: 32630]
d4i03a_ : (ILE114) (TYR132) [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1v4sa1 : (PRO145) (ARG191) [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Glucokinase |Human (Homo sapiens) [TaxId: 9606]
d1kkma_ : (SER229) (GLY290) [view usage] : c.91.1.2 |PEP carboxykinase-like |PEP carboxykinase-like |HPr kinase HprK C-terminal domain |HPr kinase HprK C-terminal domain |Lactobacillus casei [TaxId: 1582]
d3sgva_ : (ASP190) (ASN238) [view usage] : c.101.1.1 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Escherichia coli [TaxId: 562]
d1poxa1 : (ARG300) (VAL337) [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Pyruvate oxidase |Lactobacillus plantarum [TaxId: 1590]
d3gjxc_ : (PRO116) (GLY170) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Ran |Human (Homo sapiens) [TaxId: 9606]
d1vaxa1 : (ARG180) (ALA215) [view usage] : d.96.1.4 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |Urate oxidase (uricase) |Urate oxidase (uricase) |Arthrobacter globiformis [TaxId: 1665]
d1aira_ : (HIS145) (PHE165) [view usage] : b.80.1.1 |Single-stranded right-handed beta-helix |Pectin lyase-like |Pectate lyase-like |Pectate lyase |Erwinia chrysanthemi, type C [TaxId: 556]
d2dlxa1 : (ILE8) (HIS27) [view usage] : c.47.1.24 |Thioredoxin fold |Thioredoxin-like |UAS domain |UBX domain-containing protein 7 |Human (Homo sapiens) [TaxId: 9606]
d1diwa1 : (GLN1082) (LEU1109) [view usage] : b.29.1.6 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Clostridium neurotoxins, the second last domain |Tetanus neurotoxin |Clostridium tetani [TaxId: 1513]
d1zofa1 : (PRO8) (LEU31) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Thioredoxin reductase TsaA |Helicobacter pylori [TaxId: 210]
d3j39a_ : (GLN86) (PRO108) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Drosophila melanogaster [TaxId: 7227]
d1d4oa_ : (LYS134) (SER181) [view usage] : c.31.1.4 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Transhydrogenase domain III (dIII) |Transhydrogenase domain III (dIII) |Cow (Bos taurus) [TaxId: 9913]
d1ht3a_ : (VAL177) (GLY241) [view usage] : c.41.1.1 |Subtilisin-like |Subtilisin-like |Subtilases |Proteinase K |Fungus (Tritirachium album), strain limber [TaxId: 37998]
d3pc8d_ : (THR889) (ARG916) [view usage] : c.15.1.2 |BRCT domain |BRCT domain |DNA ligase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2e99a_ : (ASP190) (ARG239) [view usage] : c.101.1.1 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |automated matches |Escherichia coli [TaxId: 562]
d1xnaa_ : (GLU3) (LYS26) [view usage] : b.18.1.8 |Galactose-binding domain-like |Galactose-binding domain-like |N-terminal domain of xrcc1 |N-terminal domain of xrcc1 |Human (Homo sapiens) [TaxId: 9606]
d1di0e_ : (VAL109) (ILE153) [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Brucella abortus [TaxId: 235]
d1v53a_ : (ASP327) (LEU355) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Bacillus coagulans [TaxId: 1398]
d1di0a_ : (VAL109) (ALA155) [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Brucella abortus [TaxId: 235]
d2fsvc1 : (GLY158) (MET202) [view usage] : c.31.1.4 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Transhydrogenase domain III (dIII) |Transhydrogenase domain III (dIII) |Rhodospirillum rubrum [TaxId: 1085]
d2e98a_ : (ASP190) (GLU240) [view usage] : c.101.1.1 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |automated matches |Escherichia coli [TaxId: 562]
d1pnoa_ : (GLY419) (ASN464) [view usage] : c.31.1.4 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Transhydrogenase domain III (dIII) |Transhydrogenase domain III (dIII) |Rhodospirillum rubrum [TaxId: 1085]
d1tece_ : (ASN177) (GLY242) [view usage] : c.41.1.1 |Subtilisin-like |Subtilisin-like |Subtilases |Thermitase |Thermoactinomyces vulgaris [TaxId: 2026]
d1i3qc2 : (ASP47) (ILE70) [view usage] : d.181.1.1 |Insert subdomain of RNA polymerase alpha subunit |Insert subdomain of RNA polymerase alpha subunit |Insert subdomain of RNA polymerase alpha subunit |RPB3 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1xltc_ : (GLY419) (ASN464) [view usage] : c.31.1.4 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Transhydrogenase domain III (dIII) |Transhydrogenase domain III (dIII) |Rhodospirillum rubrum [TaxId: 1085]
d1h54a1 : (GLY402) (GLU425) [view usage] : a.102.1.4 |alpha/alpha toroid |Six-hairpin glycosidases |Glycosyltransferase family 36 C-terminal domain |Lactobacillus maltose phosphorylase, central domain |Lactobacillus brevis [TaxId: 1580]
d1xizb_ : (ILE4) (GLY35) [view usage] : d.112.1.1 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |IIA domain of mannitol-specific and ntr phosphotransferase EII |Putative PTS protein STM3784 |Salmonella typhimurium [TaxId: 90371]
d4j16c_ : (LYS403) (LEU450) [view usage] : c.31.1.4 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Transhydrogenase domain III (dIII) |automated matches |Thermus thermophilus [TaxId: 262724]
d1gg4a3 : (GLY63) (VAL98) [view usage] : c.98.1.1 |MurF and HprK N-domain-like |MurE/MurF N-terminal domain |MurE/MurF N-terminal domain |UDP-murNac-tripeptide D-alanyl-D-alanine-adding enzyme MurF |Escherichia coli [TaxId: 562]
d1suwa_ : (LYS60) (PHE95) [view usage] : e.52.1.1 |NAD kinase/diacylglycerol kinase-like |NAD kinase/diacylglycerol kinase-like |NAD kinase-like |Inorganic polyphosphate/ATP-NAD kinase PpnK |Archaeoglobus fulgidus [TaxId: 2234]
d1esza_ : (GLY205) (LYS231) [view usage] : c.92.2.1 |Chelatase-like |"Helical backbone" metal receptor |Periplasmic ferric siderophore binding protein FhuD |Periplasmic ferric siderophore binding protein FhuD |Escherichia coli [TaxId: 562]
d1uehb_ : (ASP190) (ARG239) [view usage] : c.101.1.1 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Escherichia coli [TaxId: 562]
d1pnob_ : (GLY419) (ASN464) [view usage] : c.31.1.4 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Transhydrogenase domain III (dIII) |Transhydrogenase domain III (dIII) |Rhodospirillum rubrum [TaxId: 1085]
d2nxea1 : (PRO74) (HIS117) [view usage] : c.66.1.39 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Ribosomal protein L11 methyltransferase PrmA |PrmA-like protein TTHA0656 (TT0836) |Thermus thermophilus [TaxId: 274]
d1tqya2 : (HIS260) (ARG297) [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA |Streptomyces coelicolor [TaxId: 1902]
d1kkmc_ : (SER229) (GLY290) [view usage] : c.91.1.2 |PEP carboxykinase-like |PEP carboxykinase-like |HPr kinase HprK C-terminal domain |HPr kinase HprK C-terminal domain |Lactobacillus casei [TaxId: 1582]
d1v7ua_ : (VAL192) (ARG239) [view usage] : c.101.1.1 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Escherichia coli [TaxId: 562]
d1hzzc_ : (GLY158) (ASN203) [view usage] : c.31.1.4 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Transhydrogenase domain III (dIII) |Transhydrogenase domain III (dIII) |Rhodospirillum rubrum [TaxId: 1085]
d1wuua1 : (PRO121) (LEU156) [view usage] : d.14.1.5 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |GHMP Kinase, N-terminal domain |Galactokinase |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.80, c.69, d.58, i.1, c.108, b.29, c.92, a.102, c.66, d.92, c.77, c.37, c.47, c.55, c.95, b.18, d.14, c.31, d.96, b.1,
c.41, c.101, c.16, c.91, c.98, e.52, c.15, d.112, d.181