Tableau information
Concept source: d3oqda_ amino acid (a.a.) range (PRO63)(ILE93)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO63) (CYS67) E1
(GLY73) (GLY78) E2
(ARG87) (ILE93) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 93.2° E2
H3 -73.0° -152.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1espa_ : (ILE40) (ALA69) [view usage] : d.92.1.2 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Thermolysin-like |Neutral protease |Bacillus cereus, strain dsm 3101 [TaxId: 1396]
d3oq7a_ : (PRO63) (ILE93) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 1 protease |Human immunodeficiency virus type 1 [TaxId: 11676]
d3ou1b_ : (PRO63) (ILE93) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 1 protease |Human immunodeficiency virus type 1 [TaxId: 11676]
d2p75b_ : (MET1) (GLY17) [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d3j39q_ : (LEU93) (ALA116) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Drosophila melanogaster [TaxId: 7227]
d2p9zb_ : (MET1) (GLY17) [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d2b60a_ : (PRO63) (ILE93) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |automated matches |Human immunodeficiency virus 1 [TaxId: 11676]
d3p1tc_ : (GLY297) (SER333) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 28450]
d3fsla_ : (GLY378) (MET409) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aromatic aminoacid aminotransferase, AroAT |Escherichia coli K-12 [TaxId: 83333]
d1sgua_ : (PRO63) (ILE93) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 1 protease |Human immunodeficiency virus type 1 [TaxId: 11676]
d3p1ta_ : (GLY297) (SER333) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 28450]
d3upjb_ : (VAL62) (LEU93) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 2 (HIV-2) protease |Human immunodeficiency virus type 2 [TaxId: 11709]
d1lk9b_ : (ARG384) (ALA424) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Alliinase |Garlic (Allium sativum) [TaxId: 4682]
d1v2eb_ : (VAL328) (LEU364) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Glutamine aminotransferase |Thermus thermophilus [TaxId: 274]
d3ekpa_ : (PRO63) (GLY94) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 1 protease |Hiv-1 m:b_arv2/sf2 [TaxId: 11685]
d1grha_ : (VAL18) (GLY43) [view usage] : i.12.1.1 |Proteins of incorrect, partial and unknown sequence |Proteins of incorrect, partial and unknown sequence |Proteins of incorrect, partial and unknown sequence |Glutathione reductase |Human (Homo sapiens) [TaxId: 9606]
d2sama_ : (VAL62) (GLY94) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Simian immunodeficiency virus (SIV) protease |Simian immunodeficiency virus, different strains [TaxId: 11723]
d3oqda_ : (PRO63) (ILE93) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 1 protease |Human immunodeficiency virus type 1 [TaxId: 11676]
d1lk9a_ : (ARG384) (ALA424) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Alliinase |Garlic (Allium sativum) [TaxId: 4682]
d3fn1a_ : (LYS388) (THR404) [view usage] : c.111.1.2 |Activating enzymes of the ubiquitin-like proteins |Activating enzymes of the ubiquitin-like proteins |Ubiquitin activating enzymes (UBA) |UBA3 |Human (Homo sapiens) [TaxId: 9606]
d1i82a_ : (MET0) (THR22) [view usage] : b.1.9.2 |Immunoglobulin-like beta-sandwich |CBD9-like |Family 9 carbohydrate-binding module, CBD9 |Xylanase 10A |Thermotoga maritima [TaxId: 2336]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.67, i.1, d.92, b.50, c.60, b.1, c.111, i.12