Tableau information
Concept source: d4afna_ amino acid (a.a.) range (LEU84)(VAL124)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU84) (ASN89) E1
(ALA90) (ASP95) E2
(LYS102) (VAL124) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -19.0° E2
H3 -169.9° -162.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2ayxa2 : (ARG760) (LEU800) [view usage] : c.23.1.6 |Flavodoxin-like |CheY-like |RcsC linker domain-like |Sensor kinase protein RcsC |Escherichia coli [TaxId: 562]
d3vada1 : (THR43) (GLN66) [view usage] : a.29.5.0 |Bromodomain-like |alpha-ketoacid dehydrogenase kinase, N-terminal domain |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3f81a_ : (THR57) (LYS116) [view usage] : c.45.1.1 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Dual specificity phosphatase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1f8xa_ : (PRO2) (ASN31) [view usage] : c.23.14.1 |Flavodoxin-like |N-(deoxy)ribosyltransferase-like |N-deoxyribosyltransferase |Nucleoside 2-deoxyribosyltransferase |Lactobacillus leichmannii [TaxId: 28039]
d4nbta_ : (ASP76) (GLY124) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Acholeplasma laidlawii [TaxId: 441768]
d3bwya_ : (SER60) (LEU80) [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |Catechol O-methyltransferase, COMT |Human (Homo sapiens) [TaxId: 9606]
d3tz2a1 : (THR43) (LEU82) [view usage] : a.29.5.0 |Bromodomain-like |alpha-ketoacid dehydrogenase kinase, N-terminal domain |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2y96a_ : (THR82) (LEU136) [view usage] : c.45.1.0 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4dalb_ : (GLY129) (GLY166) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d2z5va_ : (ILE106) (SER147) [view usage] : c.23.2.0 |Flavodoxin-like |Toll/Interleukin receptor TIR domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1c5ka2 : (ILE38) (GLY67) [view usage] : c.51.2.1 |Anticodon-binding domain-like |TolB, N-terminal domain |TolB, N-terminal domain |TolB, N-terminal domain |Escherichia coli [TaxId: 562]
d2cl5a_ : (SER60) (LEU80) [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1sq0a_ : (GLY561) (VAL584) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |von Willebrand factor A1 domain, vWA1 |Human (Homo sapiens) [TaxId: 9606]
d2js7a_ : (LEU45) (CYS72) [view usage] : c.23.2.0 |Flavodoxin-like |Toll/Interleukin receptor TIR domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1oa0a_ : (VAL320) (CYS354) [view usage] : e.26.1.1 |Prismane protein-like |Prismane protein-like |Hybrid cluster protein (prismane protein) |Hybrid cluster protein (prismane protein) |Desulfovibrio desulfuricans [TaxId: 876]
d3c97a_ : (SER631) (SER671) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Aspergillus oryzae [TaxId: 510516]
d4pwzb1 : (ARG35) (SER65) [view usage] : c.51.2.0 |Anticodon-binding domain-like |TolB, N-terminal domain |automated matches |automated matches |Yersinia pestis [TaxId: 214092]
d2c77a3 : (ILE6) (ASN39) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d4lyra_ : (ASN58) (ASN106) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Rhizomucor miehei [TaxId: 4839]
d1h1da_ : (SER60) (LEU80) [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |Catechol O-methyltransferase, COMT |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3zjkb_ : (TRP332) (GLY376) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |automated matches |Thermus thermophilus [TaxId: 274]
d3iaxa1 : (ILE37) (SER65) [view usage] : c.51.2.0 |Anticodon-binding domain-like |TolB, N-terminal domain |automated matches |automated matches |Escherichia coli [TaxId: 562]
d2ebna_ : (GLY245) (GLY275) [view usage] : c.1.8.5 |TIM beta/alpha-barrel |(Trans)glycosidases |Type II chitinase |Endo-beta-N-acetylglucosaminidase |Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]
d1x9ga_ : (LYS53) (GLU97) [view usage] : c.33.1.3 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Ribonuclease MAR1 |Leishmania donovani [TaxId: 5661]
d4k3vb_ : (LYS254) (MET291) [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Staphylococcus aureus [TaxId: 869816]
d1yzva_ : (VAL54) (ASP98) [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
d3esxa_ : (GLY113) (GLY168) [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |automated matches |Anabaena sp. [TaxId: 1168]
d4esoa_ : (ASP83) (LEU123) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d4lyqa_ : (ASN58) (TYR105) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Rhizomucor miehei [TaxId: 4839]
d3r8wa_ : (ASN331) (ASP360) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d4fn4a_ : (ASP87) (VAL128) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Sulfolobus acidocaldarius [TaxId: 330779]
d4j2ha_ : (ASP89) (ALA136) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d3hjha2 : (GLY354) (THR380) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1gnla_ : (VAL320) (CYS354) [view usage] : e.26.1.1 |Prismane protein-like |Prismane protein-like |Hybrid cluster protein (prismane protein) |Hybrid cluster protein (prismane protein) |Desulfovibrio desulfuricans [TaxId: 876]
d3riha_ : (ASP99) (LEU140) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
d4fqxc1 : (ASN15) (GLY32) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3ea5a_ : (PRO116) (GLY170) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Ran |Human (Homo sapiens) [TaxId: 9606]
d1bhsa_ : (VAL86) (LEU126) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Human estrogenic 17beta-hydroxysteroid dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
d1xtoa_ : (LEU76) (LEU100) [view usage] : d.157.1.6 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Coenzyme PQQ synthesis protein B, PqqB |Coenzyme PQQ synthesis protein B, PqqB |Pseudomonas putida [TaxId: 303]
d1v6za2 : (ALA153) (GLY198) [view usage] : c.116.1.5 |alpha/beta knot |alpha/beta knot |YggJ C-terminal domain-like |Hypothetical protein TTHA0657 (TT1575) |Thermus thermophilus [TaxId: 274]
d3mfqa_ : (GLY266) (LYS309) [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Streptococcus suis [TaxId: 391295]
d4nnoa_ : (LYS271) (LYS309) [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Staphylococcus aureus [TaxId: 158878]
d2w8ba1 : (ILE37) (SER65) [view usage] : c.51.2.0 |Anticodon-binding domain-like |TolB, N-terminal domain |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1xn4a_ : (ASN51) (GLU97) [view usage] : c.33.1.3 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Ribonuclease MAR1 |Leishmania major [TaxId: 5664]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.2, c.82, c.92, d.157, c.66, c.77, c.45, c.23, c.37, c.62, c.116, c.51, d.19, c.33, e.26, a.29