Tableau information
Concept source: d2cvea2 amino acid (a.a.) range (ALA150)(ARG173)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA150) (THR158) E1
(GLY161) (PRO169) E2
(PRO169) (ARG173) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 149.8° E2
H3 -59.8° -130.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3kobc_ : (MET1) (GLU26) [view usage] : c.110.1.0 |DTD-like |DTD-like |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]
d4nbta_ : (THR42) (GLY73) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Acholeplasma laidlawii [TaxId: 441768]
d1vs6f1 : (LYS63) (ARG111) [view usage] : d.77.1.1 |RL5-like |RL5-like |Ribosomal protein L5 |Ribosomal protein L5 |Escherichia coli [TaxId: 562]
d4m1qb2 : (PRO275) (ILE313) [view usage] : d.162.1.0 |LDH C-terminal domain-like |LDH C-terminal domain-like |automated matches |automated matches |Bacillus selenitireducens [TaxId: 439292]
d4od3l1 : (SER9) (ASN31) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1r67a_ : (LEU33) (PRO59) [view usage] : d.113.1.2 |Nudix |Nudix |IPP isomerase-like |Isopentenyl diphosphate isomerase |Escherichia coli [TaxId: 562]
d2vfba_ : (ALA114) (THR134) [view usage] : d.3.1.5 |Cysteine proteinases |Cysteine proteinases |Arylamine N-acetyltransferase |automated matches |Mycobacterium marinum [TaxId: 1781]
d2obea1 : (ASP904) (ASN929) [view usage] : b.121.2.0 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group II dsDNA viruses VP |automated matches |automated matches |Simian adenovirus 25 [TaxId: 175567]
d1nlta2 : (SER258) (ILE278) [view usage] : b.4.1.1 |HSP40/DnaJ peptide-binding domain |HSP40/DnaJ peptide-binding domain |HSP40/DnaJ peptide-binding domain |Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2v4ja2 : (HIS67) (PHE97) [view usage] : d.58.36.2 |Ferredoxin-like |Nitrite/Sulfite reductase N-terminal domain-like |DsrA/DsrB N-terminal-domain-like |Dissimilatory sulfite reductase subunit alpha, DsrA |Desulfovibrio vulgaris [TaxId: 881]
d1woqa2 : (GLY142) (GLY192) [view usage] : c.55.1.10 |Ribonuclease H-like motif |Actin-like ATPase domain |ROK |Inorganic polyphosphate/ATP-glucomannokinase PPGMK |Arthrobacter sp. KM [TaxId: 184230]
d1w8xh_ : (PHE360) (ASN388) [view usage] : i.6.1.1 |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |PRD1 capsid assembly |Bacteriophage PRD1 [TaxId: 10658]
d1xafb_ : (LYS3) (ALA38) [view usage] : d.194.1.2 |CNF1/YfiH-like putative cysteine hydrolases |CNF1/YfiH-like putative cysteine hydrolases |YfiH-like |Hypothetical protein yfiH |Shigella flexneri [TaxId: 623]
d3fpqa_ : (LYS49) (LEU87) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Protein kinase wnk1 |Human (Homo sapiens) [TaxId: 9606]
d1kzla1 : (THR52) (LEU70) [view usage] : b.43.4.3 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |Riboflavin synthase |Riboflavin synthase |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d3h3fa2 : (PRO291) (LEU329) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |automated matches |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1t2fa2 : (PRO292) (LEU330) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |Lactate dehydrogenase |Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
d3vyqa_ : (HIS70) (LYS92) [view usage] : d.10.1.0 |DNA-binding domain |DNA-binding domain |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2c4gc_ : (GLY16) (ARG50) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1t4wa_ : (GLU250) (SER276) [view usage] : b.2.5.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |p53 DNA-binding domain-like |Transcription factor CEP-1 |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d2w99b_ : (GLY18) (GLU67) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4lzia3 : (GLY187) (ASN223) [view usage] : d.17.1.0 |Cystatin-like |Cystatin/monellin |automated matches |automated matches |Potato (Solanum tuberosum) [TaxId: 4113]
d2b5xa1 : (LYS14) (TYR58) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |thiol:disulfide oxidoreductase YkuV |Bacillus subtilis [TaxId: 1423]
d3smpb1 : (PHE239) (GLU265) [view usage] : c.55.1.14 |Ribonuclease H-like motif |Actin-like ATPase domain |Fumble-like |Pantothenate kinase 1, PANK1 |Human (Homo sapiens) [TaxId: 9606]
d1q8zb_ : (SER170) (ASP213) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Sky1p |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1lara1 : (ASN1383) (THR1404) [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |RPTP Lar |Human (Homo sapiens) [TaxId: 9606]
d3pv4a1 : (ILE243) (GLY264) [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Legionella fallonii [TaxId: 96230]
d3mdjb1 : (TYR163) (PHE191) [view usage] : b.98.1.0 |Zn aminopeptidase N-terminal domain |Zn aminopeptidase N-terminal domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1hwna_ : (THR33) (VAL55) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Ebulin A-chain |Sambucus ebulus [TaxId: 28503]
d2cc3b_ : (LYS178) (PRO214) [view usage] : d.17.4.26 |Cystatin-like |NTF2-like |VirB8-like |automated matches |Agrobacterium tumefaciens [TaxId: 358]
d4ojna2 : (PRO292) (LEU330) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |Lactate dehydrogenase |Human (Homo sapiens), muscle isoform (M chain) [TaxId: 9606]
d9ldba2 : (PRO290) (LEU329) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |Lactate dehydrogenase |Pig (Sus scrofa) [TaxId: 9823]
d3qnfa1 : (TYR163) (PHE191) [view usage] : b.98.1.0 |Zn aminopeptidase N-terminal domain |Zn aminopeptidase N-terminal domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1larb1 : (ASN1383) (THR1404) [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |RPTP Lar |Human (Homo sapiens) [TaxId: 9606]
d1w2ca_ : (SER197) (ASP225) [view usage] : d.143.1.3 |SAICAR synthase-like |SAICAR synthase-like |Inositol polyphosphate kinase (IPK) |Inositol 1,4,5-trisphosphate 3-kinase A, IP3K A |Human (Homo sapiens) [TaxId: 9606]
d1fl9a_ : (LEU128) (ALA155) [view usage] : c.37.1.18 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |YjeE-like |Hypothetical protein HI0065 |Haemophilus influenzae [TaxId: 727]
d2jooa_ : (SER19) (GLN38) [view usage] : g.3.15.2 |Knottins (small inhibitors, toxins, lectins) |Leech antihemostatic proteins |Hirudin-like |automated matches |Medicinal leech (Hirudo medicinalis) [TaxId: 6421]
d1ro5a_ : (PRO164) (LEU188) [view usage] : d.108.1.3 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |Autoinducer synthetase |Autoinducer synthesis protein LasI |Pseudomonas aeruginosa [TaxId: 287]
d3dmba_ : (THR37) (LEU62) [view usage] : b.45.1.0 |Split barrel-like |FMN-binding split barrel |automated matches |automated matches |Xanthomonas campestris [TaxId: 340]
d2ahsa_ : (SER1761) (THR1782) [view usage] : c.45.1.0 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2fvya_ : (TRP284) (PHE306) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Galactose/glucose-binding protein |Escherichia coli [TaxId: 562]
d1fina_ : (GLY16) (ARG50) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Cyclin-dependent PK, CDK2 |Human (Homo sapiens) [TaxId: 9606]
d3wxme1 : (ASP73) (VAL98) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Aeropyrum pernix [TaxId: 56636]
d1gz5a_ : (LYS53) (TYR90) [view usage] : c.87.1.6 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Trehalose-6-phosphate synthase, OtsA |Trehalose-6-phosphate synthase, OtsA |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.2, d.58, c.93, c.45, d.165, i.6, d.144, c.37, c.47, c.55, d.194, b.121, d.3, c.87, b.2, b.1, b.45, d.108, d.143, d.17,
d.162, c.110, b.43, d.113, b.36, b.98, d.77, g.3, b.4, d.10