Tableau information
Concept source: d2uyrx_ amino acid (a.a.) range (PRO98)(ASN130)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO98) (LYS108) E1
(ALA112) (VAL118) E2
(GLY124) (ASN130) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 158.5° E2
H3 -65.7° -135.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1biya1 : (THR90) (LEU132) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Domestic water buffalo (Bubalus arnee bubalis) [TaxId: 89462]
d1xhoa_ : (LYS85) (LEU113) [view usage] : d.79.1.2 |Bacillus chorismate mutase-like |YjgF-like |Chorismate mutase |Chorismate mutase |Clostridium thermocellum [TaxId: 1515]
d1biya2 : (GLY432) (THR478) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Domestic water buffalo (Bubalus arnee bubalis) [TaxId: 89462]
d1dtza2 : (GLY432) (PRO473) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Camel (Camelus dromedarius) [TaxId: 9838]
d1vcla3 : (VAL288) (LYS332) [view usage] : d.281.1.1 |Hemolytic lectin CEL-III, C-terminal domain |Hemolytic lectin CEL-III, C-terminal domain |Hemolytic lectin CEL-III, C-terminal domain |Hemolytic lectin CEL-III, C-terminal domain |Cucumaria echinata [TaxId: 40245]
d1btja_ : (THR93) (LEU135) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Human (Homo sapiens) [TaxId: 9606]
d3wu3b_ : (ASP609) (ALA647) [view usage] : d.14.1.10 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |ATP-dependent protease Lon (La), catalytic domain |ATP-dependent protease Lon (La), catalytic domain |Escherichia coli [TaxId: 562]
d1bp5c_ : (THR93) (TYR136) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Human (Homo sapiens) [TaxId: 9606]
d3zo8a_ : (LYS87) (LEU115) [view usage] : d.79.1.2 |Bacillus chorismate mutase-like |YjgF-like |Chorismate mutase |Chorismate mutase |Bacillus subtilis [TaxId: 1423]
d3qyta1 : (THR93) (LEU135) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1xhoc_ : (LYS85) (LEU113) [view usage] : d.79.1.2 |Bacillus chorismate mutase-like |YjgF-like |Chorismate mutase |Chorismate mutase |Clostridium thermocellum [TaxId: 1515]
d1ui9a_ : (ARG86) (ARG115) [view usage] : d.79.1.2 |Bacillus chorismate mutase-like |YjgF-like |Chorismate mutase |Chorismate mutase |Thermus thermophilus [TaxId: 274]
d1d4na_ : (THR93) (LEU135) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Human (Homo sapiens) [TaxId: 9606]
d2ixia_ : (GLU142) (GLY171) [view usage] : b.82.1.1 |Double-stranded beta-helix |RmlC-like cupins |dTDP-sugar isomerase |dTDP-4-dehydrorhamnose 3,5-epimerase RmlC |Pseudomonas aeruginosa [TaxId: 287]
d3skpa_ : (ASP420) (TYR468) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ufya_ : (ARG86) (ARG115) [view usage] : d.79.1.2 |Bacillus chorismate mutase-like |YjgF-like |Chorismate mutase |Chorismate mutase |Thermus thermophilus [TaxId: 274]
d1ukcb_ : (LEU102) (ASP147) [view usage] : c.69.1.17 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Fungal lipases |Esterase EstA |Aspergillus niger [TaxId: 5061]
d2iaja1 : (PRO1) (GLY45) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
d1u0nd_ : (TYR185) (ASN223) [view usage] : c.10.2.7 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Ngr ectodomain-like |von Willebrand factor binding domain of glycoprotein Ib alpha |Human (Homo sapiens) [TaxId: 9606]
d1comb_ : (LYS87) (LEU119) [view usage] : d.79.1.2 |Bacillus chorismate mutase-like |YjgF-like |Chorismate mutase |Chorismate mutase |Bacillus subtilis [TaxId: 1423]
d1cu1a2 : (VAL256) (GLY277) [view usage] : c.37.1.14 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RNA helicase |HCV helicase domain |Human hepatitis C virus (HCV), different isolates [TaxId: 11103]
d2o1ma_ : (TYR101) (ASN147) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d3qvga_ : (VAL846) (ASP876) [view usage] : c.15.1.2 |BRCT domain |BRCT domain |DNA ligase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2chtg_ : (LYS87) (LEU115) [view usage] : d.79.1.2 |Bacillus chorismate mutase-like |YjgF-like |Chorismate mutase |Chorismate mutase |Bacillus subtilis [TaxId: 1423]
d1ukca_ : (LEU102) (ASP147) [view usage] : c.69.1.17 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Fungal lipases |Esterase EstA |Aspergillus niger [TaxId: 5061]
d1comf_ : (LYS87) (LEU115) [view usage] : d.79.1.2 |Bacillus chorismate mutase-like |YjgF-like |Chorismate mutase |Chorismate mutase |Bacillus subtilis [TaxId: 1423]
d3us8a_ : (ILE4) (TYR34) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Sinorhizobium meliloti [TaxId: 266834]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.10, b.82, c.69, c.94, c.77, c.37, d.151, d.14, d.79, c.15, d.281