Tableau information
Concept source: d2claa_ amino acid (a.a.) range (LYS177)(SER216)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS177) (GLY182) E1
(LEU185) (HIS194) E2
(GLY200) (SER216) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 130.4° E2
H3 -72.8° 147.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3ejxa1 : (VAL30) (CYS61) [view usage] : d.21.1.1 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |Diaminopimelate epimerase |Diaminopimelate epimerase |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1yjxh_ : (PRO215) (GLU244) [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2fyea_ : (LYS78) (GLY128) [view usage] : d.3.1.1 |Cysteine proteinases |Cysteine proteinases |Papain-like |(Pro)cathepsin S |Human (Homo sapiens) [TaxId: 9606]
d2bvja_ : (HIS42) (ASP67) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces venezuelae [TaxId: 54571]
d2fp4a1 : (GLY52) (GLY72) [view usage] : c.2.1.8 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |CoA-binding domain |Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain |Pig (Sus scrofa) [TaxId: 9823]
d2claa_ : (LYS177) (SER216) [view usage] : c.43.1.1 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |CAT-like |Chloramphenicol acetyltransferase, CAT |Escherichia coli [TaxId: 562]
d1ciaa_ : (LYS177) (SER216) [view usage] : c.43.1.1 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |CAT-like |Chloramphenicol acetyltransferase, CAT |Escherichia coli [TaxId: 562]
d2p4nb1 : (TYR52) (ARG79) [view usage] : i.10.1.1 |Microtubule complexes |Microtubule complexes |Microtubule complexes |Tubulin:stathmin-like domain complex |Cow (Bos taurus) [TaxId: 9913]
d1yjxe_ : (PRO215) (GLU244) [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1l2ma_ : (PHE7) (LEU35) [view usage] : d.89.1.4 |Origin of replication-binding domain, RBD-like |Origin of replication-binding domain, RBD-like |DNA-binding domain of REP protein |DNA-binding domain of REP protein |Geminivirus (Tomato yellow leaf curl virus - sardinia) [TaxId: 123735]
d3gzxa2 : (LYS418) (MET447) [view usage] : d.129.3.0 |TBP-like |Bet v1-like |automated matches |automated matches |Comamonas testosteroni [TaxId: 285]
d1gjma_ : (GLU84) (VAL119) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450-CAM |Pseudomonas putida [TaxId: 303]
d1waca_ : (GLY493) (PRO528) [view usage] : e.8.1.6 |DNA/RNA polymerases |DNA/RNA polymerases |dsRNA phage RNA-dependent RNA-polymerase |dsRNA phage RNA-dependent RNA-polymerase |Bacteriophage PHI-6 [TaxId: 10879]
d4n72b_ : (GLU580) (SER622) [view usage] : c.43.1.0 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |automated matches |automated matches |Escherichia coli [TaxId: 83334]
d3bk3a_ : (PRO18) (LEU55) [view usage] : g.17.1.2 |Cystine-knot cytokines |Cystine-knot cytokines |Transforming growth factor (TGF)-beta |Bone morphogenetic protein-2 (BMP-2) |Human (Homo sapiens) [TaxId: 9606]
d1evua4 : (PHE339) (LYS366) [view usage] : d.3.1.4 |Cysteine proteinases |Cysteine proteinases |Transglutaminase core |Transglutaminase catalytic domain |Human (Homo sapiens), blood isozyme [TaxId: 9606]
d1vgga_ : (MSE1) (VAL27) [view usage] : d.256.1.1 |Ta1353-like |Ta1353-like |Ta1353-like |Hypothetical protein TT1634 (TTHA1091) |Thermus thermophilus [TaxId: 274]
d1pd5i_ : (LYS175) (GLU214) [view usage] : c.43.1.1 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |CAT-like |Chloramphenicol acetyltransferase, CAT |Escherichia coli [TaxId: 562]
d3hsda_ : (SER38) (ASN71) [view usage] : d.58.30.1 |Ferredoxin-like |6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |Escherichia coli [TaxId: 562]
d1b93a_ : (THR4) (HIS33) [view usage] : c.24.1.2 |Methylglyoxal synthase-like |Methylglyoxal synthase-like |Methylglyoxal synthase, MgsA |Methylglyoxal synthase, MgsA |Escherichia coli [TaxId: 562]
d2fnia_ : (TYR269) (LYS307) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Spore coat polysaccharide biosynthesis protein C |Helicobacter pylori [TaxId: 210]
d1uu0c_ : (TYR274) (ASN304) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Histidinol-phosphate aminotransferase HisC |Thermotoga maritima [TaxId: 2336]
d2hxfb1 : (TYR52) (ARG79) [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |Tubulin beta-subunit |Pig (Sus scrofa) [TaxId: 9823]
d1jffb1 : (TYR52) (ARG79) [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |Tubulin beta-subunit |Cow (Bos taurus) [TaxId: 9913]
d1wkpb_ : (ARG53) (LEU86) [view usage] : b.17.1.0 |PEBP-like |PEBP-like |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1wkpa_ : (ARG53) (LEU86) [view usage] : b.17.1.0 |PEBP-like |PEBP-like |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1b9ia_ : (ASP286) (GLY316) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) |Amycolatopsis mediterranei [TaxId: 33910]
d2c12a2 : (GLY165) (ILE208) [view usage] : e.6.1.1 |Acyl-CoA dehydrogenase NM domain-like |Acyl-CoA dehydrogenase NM domain-like |Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains |Nitroalkane oxidase |Fungus (Fusarium oxysporum) [TaxId: 5507]
d3hdoa_ : (VAL317) (GLU351) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Geobacter metallireducens [TaxId: 269799]
d1wc1a_ : (GLN1052) (ARG1080) [view usage] : d.58.29.1 |Ferredoxin-like |Nucleotide cyclase |Adenylyl and guanylyl cyclase catalytic domain |Adenylate cyclase CyaC |Spirulina platensis [TaxId: 118562]
d4hwra1 : (SER494) (ALA530) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |automated matches |Escherichia coli K-12 [TaxId: 83333]
d4claa_ : (LYS177) (SER216) [view usage] : c.43.1.1 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |CAT-like |Chloramphenicol acetyltransferase, CAT |Escherichia coli [TaxId: 562]
d2bkoa2 : (ASN168) (GLY195) [view usage] : d.286.1.1 |TrkA C-terminal domain-like |TrkA C-terminal domain-like |TrkA C-terminal domain-like |Hypothetical protein PH0236, C-terminal domain |Pyrococcus horikoshii [TaxId: 53953]
d2hg7a1 : (PHE20) (PRO57) [view usage] : d.186.2.1 |gpW/XkdW-like |XkdW-like |XkdW-like |Phage-like element PbsX protein XkdW |Bacillus subtilis [TaxId: 1423]
d1claa_ : (LYS177) (SER216) [view usage] : c.43.1.1 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |CAT-like |Chloramphenicol acetyltransferase, CAT |Escherichia coli [TaxId: 562]
d3hdob_ : (VAL317) (GLY350) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Geobacter metallireducens [TaxId: 269799]
d3bzma_ : (GLN309) (GLN340) [view usage] : d.161.1.1 |ADC synthase |ADC synthase |ADC synthase |automated matches |Escherichia coli [TaxId: 562]
d2ekma_ : (VAL3) (VAL29) [view usage] : d.256.1.0 |Ta1353-like |Ta1353-like |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 111955]
d2fnua_ : (TYR269) (GLY309) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Spore coat polysaccharide biosynthesis protein C |Helicobacter pylori [TaxId: 210]
d4n72a_ : (GLU580) (ASP623) [view usage] : c.43.1.0 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |automated matches |automated matches |Escherichia coli [TaxId: 83334]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.67, a.104, c.2, d.58, d.129, d.104, e.6, d.3, c.60, c.32, c.43, d.21, c.24, i.10, d.256, d.89, b.17, g.17, d.161,
d.286, d.186