Tableau information
Concept source: d1jjua4 amino acid (a.a.) range (LEU435)(THR479)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU435) (ALA439) E1
(LYS458) (ASP464) E2
(PRO469) (THR479) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 149.5° E2
E3 -37.3° 151.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3eiya_ : (PHE16) (ARG44) [view usage] : b.40.5.1 |OB-fold |Inorganic pyrophosphatase |Inorganic pyrophosphatase |automated matches |Burkholderia pseudomallei [TaxId: 320372]
d2ovpb2 : (LYS2374) (SER2398) [view usage] : b.69.4.1 |7-bladed beta-propeller |WD40 repeat-like |WD40-repeat |F-box/WD repeat-containing protein 7, FBXW7 |Human (Homo sapiens) [TaxId: 9606]
d4g9ja_ : (ASP242) (ALA269) [view usage] : d.159.1.3 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Protein serine/threonine phosphatase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1l3wa4 : (GLY392) (VAL430) [view usage] : b.1.6.1 |Immunoglobulin-like beta-sandwich |Cadherin-like |Cadherin |C-cadherin ectodomain |African clawed frog (Xenopus laevis) [TaxId: 8355]
d2v64h_ : (SER148) (LYS192) [view usage] : d.135.1.1 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3sika_ : (ASN108) (ASP147) [view usage] : b.1.28.0 |Immunoglobulin-like beta-sandwich |NEAT domain-like |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d1ds6b_ : (VAL159) (ILE195) [view usage] : b.1.18.8 |Immunoglobulin-like beta-sandwich |E set domains |RhoGDI-like |Rho GDP-dissociation inhibitor 1, RhoGDI |Human (Homo sapiens) [TaxId: 9606]
d1d7pm_ : (VAL2293) (GLY2325) [view usage] : b.18.1.2 |Galactose-binding domain-like |Galactose-binding domain-like |Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) |C2 domain of factor VIII |Human (Homo sapiens) [TaxId: 9606]
d4c2bb_ : (TYR185) (ASN210) [view usage] : c.10.2.7 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Ngr ectodomain-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2h6ca2 : (SER82) (SER108) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |Chlorophenol reduction protein CprK |Desulfitobacterium dehalogenans [TaxId: 36854]
d2vmja1 : (GLY111) (PRO144) [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |automated matches |Alcaligenes xylosoxydans [TaxId: 85698]
d1doab_ : (MET162) (LYS200) [view usage] : b.1.18.8 |Immunoglobulin-like beta-sandwich |E set domains |RhoGDI-like |Rho GDP-dissociation inhibitor 1, RhoGDI |Cow (Bos taurus) [TaxId: 9913]
d1vybb_ : (ASP205) (ARG238) [view usage] : d.151.1.1 |DNase I-like |DNase I-like |DNase I-like |Endonuclease domain of LINE-1 reverse transcriptase homolog |Human (Homo sapiens) [TaxId: 9606]
d1tnra_ : (GLU127) (ALA170) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Tumor necrosis factor (TNF) |Human (Homo sapiens) [TaxId: 9606]
d1crla_ : (THR99) (SER131) [view usage] : c.69.1.17 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Fungal lipases |Type-B carboxylesterase/lipase |Fungus (Candida rugosa), formerly Cylindracea [TaxId: 5481]
d2azua_ : (GLU91) (LEU127) [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Azurin |Pseudomonas aeruginosa [TaxId: 287]
d1akna_ : (LEU81) (GLN115) [view usage] : c.69.1.1 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetylcholinesterase-like |Bile-salt activated lipase (cholesterol esterase) |Cow (Bos taurus) [TaxId: 9913]
d1iqaa_ : (GLU268) (LYS311) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |TRANCE/RANKL cytokine |Mouse (Mus musculus) [TaxId: 10090]
d2wq8a1 : (THR111) (ALA148) [view usage] : b.18.1.0 |Galactose-binding domain-like |Galactose-binding domain-like |automated matches |automated matches |Fusarium graminearum (Gibberella zeae) [TaxId: 5518]
d1r61a_ : (GLY168) (ASP202) [view usage] : c.8.8.1 |The "swivelling" beta/beta/alpha domain |Putative cyclase |Putative cyclase |Unnamed protein |Bacillus stearothermophilus [TaxId: 1422]
d1dlca1 : (THR611) (PRO642) [view usage] : b.18.1.3 |Galactose-binding domain-like |Galactose-binding domain-like |delta-Endotoxin, C-terminal domain |delta-Endotoxin, C-terminal domain |Bacillus thuringiensis tenebrionis, CRYIIIA (BT13) [TaxId: 1444]
d1wh0a_ : (THR78) (ARG110) [view usage] : b.15.1.3 |HSP20-like chaperones |HSP20-like chaperones |GS domain |Ubiquitin carboxyl-terminal hydrolase 19, USP19 |Human (Homo sapiens) [TaxId: 9606]
d2dp9a_ : (ARG29) (VAL53) [view usage] : b.122.1.5 |PUA domain-like |PUA domain-like |Hypothetical protein TTHA0113 |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d1dlca2 : (SER449) (HIS495) [view usage] : b.77.2.1 |beta-Prism I |delta-Endotoxin (insectocide), middle domain |delta-Endotoxin (insectocide), middle domain |delta-Endotoxin (insectocide), middle domain |Bacillus thuringiensis tenebrionis, CRYIIIA (BT13) [TaxId: 1444]
d2abja_ : (ILE29) (ILE71) [view usage] : e.17.1.1 |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1vyba_ : (ASP205) (ARG238) [view usage] : d.151.1.1 |DNase I-like |DNase I-like |DNase I-like |Endonuclease domain of LINE-1 reverse transcriptase homolog |Human (Homo sapiens) [TaxId: 9606]
d4arxa3 : (ALA576) (VAL608) [view usage] : b.18.1.0 |Galactose-binding domain-like |Galactose-binding domain-like |automated matches |automated matches |Bacillus thuringiensis [TaxId: 29339]
d4c2la_ : (ASP340) (GLY375) [view usage] : b.80.1.0 |Single-stranded right-handed beta-helix |Pectin lyase-like |automated matches |automated matches |Aspergillus tubingensis [TaxId: 5068]
d4e4dx_ : (GLU268) (LYS311) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |TRANCE/RANKL cytokine |Mouse (Mus musculus) [TaxId: 10090]
d1oq1b_ : (HIS47) (ALA80) [view usage] : b.29.1.17 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Hypothetical protein YesU |Hypothetical protein YesU |Bacillus subtilis [TaxId: 1423]
d1vysx_ : (GLN117) (GLU152) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Pentaerythritol tetranirate reductase |Enterobacter cloacae [TaxId: 550]
d1k25a2 : (GLU717) (THR747) [view usage] : d.11.1.1 |Penicillin-binding protein 2x (pbp-2x), c-terminal domain |Penicillin-binding protein 2x (pbp-2x), c-terminal domain |Penicillin-binding protein 2x (pbp-2x), c-terminal domain |Penicillin-binding protein 2x (pbp-2x), c-terminal domain |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d3ppea1 : (ASP54) (ILE97) [view usage] : b.1.6.0 |Immunoglobulin-like beta-sandwich |Cadherin-like |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d1mx1b_ : (LEU2119) (SER2150) [view usage] : c.69.1.1 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetylcholinesterase-like |Mammalian carboxylesterase (liver carboxylesterase I) |Human (Homo sapiens) [TaxId: 9606]
d2aepa1 : (PHE100) (LEU134) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Influenza neuraminidase |Influenza A virus, different strains [TaxId: 11320]
d1hh4e_ : (VAL462) (ILE498) [view usage] : b.1.18.8 |Immunoglobulin-like beta-sandwich |E set domains |RhoGDI-like |Rho GDP-dissociation inhibitor 1, RhoGDI |Human (Homo sapiens) [TaxId: 9606]
d4qjeb_ : (GLN9) (THR44) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
d2hdka_ : (GLN11) (ILE53) [view usage] : e.17.1.1 |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1rtva_ : (GLN47) (THR76) [view usage] : b.82.1.1 |Double-stranded beta-helix |RmlC-like cupins |dTDP-sugar isomerase |dTDP-4-dehydrorhamnose 3,5-epimerase RmlC |Pseudomonas aeruginosa [TaxId: 287]
d3c96a2 : (GLY186) (PRO220) [view usage] : d.16.1.2 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |PHBH-like |Monooxygenase PhzS |Pseudomonas aeruginosa [TaxId: 287]
d4akda_ : (THR119) (LEU150) [view usage] : b.77.3.1 |beta-Prism I |Mannose-binding lectins |Mannose-binding lectins |automated matches |Artocarpus integer [TaxId: 3490]
d1ekfa_ : (GLN11) (ILE53) [view usage] : e.17.1.1 |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |Branched-chain aminoacid aminotransferase |Human (Homo sapiens), mitochondrial [TaxId: 9606]
d2guxa1 : (SER91) (TYR118) [view usage] : b.77.3.1 |beta-Prism I |Mannose-binding lectins |Mannose-binding lectins |Griffithsin |Red alga (Griffithsia) [TaxId: 35158]
d3eb7a2 : (GLY452) (TRP495) [view usage] : b.77.2.0 |beta-Prism I |delta-Endotoxin (insectocide), middle domain |automated matches |automated matches |Bacillus thuringiensis [TaxId: 1428]
d1ugna1 : (GLY58) (VAL95) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Ligand binding domain of lir-1 (ilt2) |Human (Homo sapiens) [TaxId: 9606]
d4coba_ : (GLY174) (ALA208) [view usage] : c.8.8.0 |The "swivelling" beta/beta/alpha domain |Putative cyclase |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d2ivda2 : (PRO310) (HIS346) [view usage] : d.16.1.5 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |L-aminoacid/polyamine oxidase |Protoporphyrinogen oxidase |Myxococcus xanthus [TaxId: 34]
d2dypd1 : (GLY58) (MET94) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Ligand binding domain of lir-2 (ilt4) |Human (Homo sapiens) [TaxId: 9606]
d1gw6a3 : (TYR256) (THR279) [view usage] : d.92.1.13 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Zn aminopeptidase catalytic domain |Leukotriene A4 hydrolase catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d4neaa1 : (GLN9) (THR44) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
d1ft0b_ : (VAL162) (LYS199) [view usage] : b.1.18.8 |Immunoglobulin-like beta-sandwich |E set domains |RhoGDI-like |Rho GDP-dissociation inhibitor 1, RhoGDI |Human (Homo sapiens) [TaxId: 9606]
d2pqsa_ : (SER123) (GLY157) [view usage] : b.18.1.0 |Galactose-binding domain-like |Galactose-binding domain-like |automated matches |automated matches |Cow (Bos taurus) [TaxId: 9913]
d3irba_ : (TYR119) (ASP144) [view usage] : b.40.4.15 |OB-fold |Nucleic acid-binding proteins |SSO2064-like |Hypothetical protein SSO2064 |Sulfolobus solfataricus [TaxId: 2287]
d3p3na_ : (ALA198) (PRO220) [view usage] : b.82.2.6 |Double-stranded beta-helix |Clavaminate synthase-like |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.80, c.1, c.10, b.82, c.69, d.159, b.69, b.29, c.82, d.92, b.40, d.151, b.18, e.17, b.6, b.122, b.1, c.8, b.77,
b.22, d.16, b.15, d.11, d.135