Tableau information
Concept source: d3u4wa_ amino acid (a.a.) range (ASN381)(VAL402)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASN381) (ASP386) E1
(ILE392) (GLU396) E2
(LEU398) (VAL402) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 87.7° E2
E3 110.7° 148.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1xhka_ : (GLU456) (LEU484) [view usage] : d.14.1.10 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |ATP-dependent protease Lon (La), catalytic domain |ATP-dependent protease Lon (La), catalytic domain |Methanococcus jannaschii [TaxId: 2190]
d1ltle_ : (VAL213) (ILE234) [view usage] : b.40.4.11 |OB-fold |Nucleic acid-binding proteins |DNA replication initiator (cdc21/cdc54) N-terminal domain |DNA replication initiator (cdc21/cdc54) N-terminal domain |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1xkna_ : (ASN265) (TYR286) [view usage] : d.126.1.6 |Pentein, beta/alpha-propeller |Pentein |Porphyromonas-type peptidylarginine deiminase |Putative peptidyl-arginine deiminase |Chlorobium tepidum [TaxId: 1097]
d1a6db2 : (ASP341) (VAL361) [view usage] : c.8.5.2 |The "swivelling" beta/beta/alpha domain |GroEL apical domain-like |Group II chaperonin (CCT, TRIC), apical domain |Thermosome, A-domain |Thermoplasma acidophilum, beta chain [TaxId: 2303]
d1xoca1 : (LEU52) (LYS85) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Oligo-peptide binding protein (OPPA) |Bacillus subtilis [TaxId: 1423]
d2w3ba_ : (LYS155) (ASN185) [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Human (Homo sapiens) [TaxId: 9606]
d2j92a1 : (ALA173) (SER192) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |3C cysteine protease (picornain 3C) |Foot-and-mouth disease virus [TaxId: 12110]
d1y4wa2 : (ARG347) (PRO371) [view usage] : b.67.2.3 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |Glycosyl hydrolases family 32 N-terminal domain |Exo-inulinase |Aspergillus awamori [TaxId: 105351]
d1qs1a1 : (GLY237) (GLY260) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Vegetative insecticidal protein 2 (VIP2) |Bacillus cereus [TaxId: 1396]
d3hj3d1 : (THR153) (GLN178) [view usage] : c.71.1.0 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |automated matches |automated matches |Cryptosporidium hominis [TaxId: 237895]
d3zpca2 : (GLN335) (GLN358) [view usage] : c.71.1.0 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |automated matches |automated matches |Acinetobacter baumannii [TaxId: 470]
d2wv4a_ : (ASP174) (SER192) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |Foot-and-mouth disease virus [TaxId: 12112]
d1qs2a1 : (GLY237) (LYS264) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Vegetative insecticidal protein 2 (VIP2) |Bacillus cereus [TaxId: 1396]
d3u4wa_ : (ASN381) (VAL402) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |c-src tyrosine kinase |Chicken (Gallus gallus) [TaxId: 9031]
d4akmb_ : (TYR319) (GLN346) [view usage] : b.180.1.1 |Pseudo beta-prism II |LAMP conserved domain-like |LAMP conserved domain |DC-LAMP |Human (Homo sapiens) [TaxId: 9606]
d1qs1a2 : (ASP434) (THR461) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Vegetative insecticidal protein 2 (VIP2) |Bacillus cereus [TaxId: 1396]
d1t45a_ : (ASN787) (CYS809) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |c-KIT receptor |Human (Homo sapiens) [TaxId: 9606]
d1qs2a2 : (ASP434) (ASN462) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Vegetative insecticidal protein 2 (VIP2) |Bacillus cereus [TaxId: 1396]
d1hfqa_ : (LYS155) (ASP186) [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Human (Homo sapiens) [TaxId: 9606]
d3vcoa_ : (LYS154) (PRO181) [view usage] : c.71.1.0 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |automated matches |automated matches |Blood fluke (Schistosoma mansoni) [TaxId: 6183]
d2crva_ : (SER6) (ARG34) [view usage] : b.43.3.0 |Reductase/isomerase/elongation factor common domain |Translation proteins |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4c3pa_ : (ARG251) (ASP274) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Aurora-related kinase 1 (aurora-2) |Human (Homo sapiens) [TaxId: 9606]
d2m94a_ : (GLY82) (GLU112) [view usage] : d.169.1.0 |C-type lectin-like |C-type lectin-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1uoka1 : (SER526) (LYS556) [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Oligo-1,6-glucosidase |Bacillus cereus [TaxId: 1396]
d2c6qa_ : (ASP237) (GLY268) [view usage] : c.1.5.0 |TIM beta/alpha-barrel |Inosine monophosphate dehydrogenase (IMPDH) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1d2ea1 : (PRO257) (THR276) [view usage] : b.43.3.1 |Reductase/isomerase/elongation factor common domain |Translation proteins |Elongation factors |Elongation factor Tu (EF-Tu), domain 2 |Cow (Bos taurus), mitochondrial [TaxId: 9913]
d1dhfa_ : (LYS155) (ASN185) [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Human (Homo sapiens) [TaxId: 9606]
d1xb2a1 : (PRO257) (THR276) [view usage] : b.43.3.1 |Reductase/isomerase/elongation factor common domain |Translation proteins |Elongation factors |Elongation factor Tu (EF-Tu), domain 2 |Cow (Bos taurus), mitochondrial [TaxId: 9913]
d3eiga_ : (LYS155) (ASP186) [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Human (Homo sapiens) [TaxId: 9606]
d1s1hl_ : (SER47) (GLN75) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1csoe_ : (THR82) (ARG107) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Protease B |Streptomyces griseus, strain k1 [TaxId: 1911]
d1k8ma_ : (TYR54) (GLU79) [view usage] : b.84.1.1 |Barrel-sandwich hybrid |Single hybrid motif |Biotinyl/lipoyl-carrier proteins and domains |Lipoyl domain of the mitochondrial branched-chain alpha-ketoacid dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
d3j38x_ : (SER45) (GLN73) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Drosophila melanogaster [TaxId: 7227]
d3g0ea_ : (ASN787) (ILE808) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |c-KIT receptor |Human (Homo sapiens) [TaxId: 9606]
d1haxb_ : (GLN206) (THR229) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Elastase |Pig (Sus scrofa) [TaxId: 9823]
d1drfa_ : (LYS155) (ASN185) [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Human (Homo sapiens) [TaxId: 9606]
d1baia_ : (TRP54) (ASP78) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Rous sarcoma virus protease |Rous sarcoma virus, strain pr-C [TaxId: 11886]
d1c1ma_ : (GLN206) (THR229) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Elastase |Pig (Sus scrofa) [TaxId: 9823]
d2c8ee_ : (HIS220) (ALA241) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |automated matches |Clostridium botulinum [TaxId: 1491]
d4m6ja_ : (LYS155) (ASP186) [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Human (Homo sapiens) [TaxId: 9606]
d1gh7a2 : (HIS106) (GLY133) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors |Human (Homo sapiens) [TaxId: 9606]
d2wv5a_ : (ASP174) (SER192) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |Foot-and-mouth disease virus [TaxId: 12112]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.94, i.1, b.67, b.47, b.50, d.144, b.40, d.166, d.169, d.14, c.71, b.1, d.126, c.8, b.84, b.43, b.71, b.180