Tableau information
Concept source: d1zlra_ amino acid (a.a.) range (LEU198)(THR229)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU198) (ASN202) E1
(GLU202) (LEU209) E2
(GLU223) (THR229) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 153.8° E2
E3 -82.1° 80.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1wk1a_ : (GLN66) (PHE103) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Hypothetical protein F28B4.3 |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d3u5ea_ : (PRO57) (GLY91) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
d1ty9a_ : (ALA60) (SER88) [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |Pyridoxine 5'-phoshate oxidase (PNP oxidase) |Pseudomonas fluorescens [TaxId: 294]
d1ivoa1 : (ALA94) (HIS121) [view usage] : c.10.2.5 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |L domain |EGF receptor extracellular domain |Human (Homo sapiens) [TaxId: 9606]
d1cnea1 : (GLY11) (CYS52) [view usage] : b.43.4.2 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |Ferredoxin reductase FAD-binding domain-like |Nitrate reductase core domain |Maize (Zea mays) [TaxId: 4577]
d1idda_ : (GLN10) (ASP35) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |Isocitrate dehydrogenase, ICDH |Escherichia coli [TaxId: 562]
d2f3la1 : (ALA7) (TYR26) [view usage] : b.80.8.1 |Single-stranded right-handed beta-helix |Pentapeptide repeat-like |Pentapeptide repeats |Lumenal RFR-domain protein |Cyanothece sp. atcc 51142 [TaxId: 43989]
d1grpa_ : (GLN10) (ASP35) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |Isocitrate dehydrogenase, ICDH |Escherichia coli [TaxId: 562]
d3suga_ : (PRO1115) (CYS1145) [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |Hepatitis C virus subtype 1a [TaxId: 31646]
d2jo6a1 : (GLN27) (GLN63) [view usage] : b.33.1.3 |ISP domain |ISP domain |NirD-like |NADH-nitrite reductase small subunit NirD |Escherichia coli [TaxId: 562]
d3rc6a_ : (PRO1115) (CYS1145) [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |NS3 protease |Hepatitis c virus subtype 1a [TaxId: 31646]
d1t9ma_ : (LEU53) (ALA80) [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |Pyridoxine 5'-phoshate oxidase (PNP oxidase) |Pseudomonas aeruginosa [TaxId: 287]
d1bvnt_ : (LEU844) (LEU874) [view usage] : b.5.1.1 |alpha-Amylase inhibitor tendamistat |alpha-Amylase inhibitor tendamistat |alpha-Amylase inhibitor tendamistat |alpha-Amylase inhibitor tendamistat |Streptomyces tendae [TaxId: 1932]
d4hmta_ : (ALA60) (SER88) [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |Pyridoxine 5'-phoshate oxidase (PNP oxidase) |Pseudomonas fluorescens [TaxId: 294]
d1ym0a_ : (LEU199) (SER229) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Worm (Eisenia fetida) [TaxId: 6396]
d1ai2a_ : (GLN10) (ASP35) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |Isocitrate dehydrogenase, ICDH |Escherichia coli [TaxId: 562]
d2bm4a1 : (GLN66) (ASP86) [view usage] : b.80.8.1 |Single-stranded right-handed beta-helix |Pentapeptide repeat-like |Pentapeptide repeats |Hypothetical protein Rv3361c (MT3469) |Mycobacterium tuberculosis [TaxId: 1773]
d6icda_ : (GLN10) (ASP35) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |Isocitrate dehydrogenase, ICDH |Escherichia coli [TaxId: 562]
d1ivob1 : (ALA94) (HIS121) [view usage] : c.10.2.5 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |L domain |EGF receptor extracellular domain |Human (Homo sapiens) [TaxId: 9606]
d4hmsb_ : (LEU59) (SER88) [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |Pyridoxine 5'-phoshate oxidase (PNP oxidase) |Pseudomonas fluorescens [TaxId: 294]
d1p4ld_ : (GLY193) (LYS256) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |NK cell receptor |Mouse (Mus musculus), ly49-c [TaxId: 10090]
d1wspa1 : (ILE753) (THR776) [view usage] : d.15.1.8 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |DIX domain |Axin 1 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3ersx_ : (VAL63) (LEU111) [view usage] : b.40.4.4 |OB-fold |Nucleic acid-binding proteins |Myf domain |Structure-specific tRNA-binding protein TRBP111 |Escherichia coli [TaxId: 562]
d3vyta_ : (ALA17) (ILE43) [view usage] : b.40.14.1 |OB-fold |HupF/HypC-like |HupF/HypC-like |Hydrogenase expression/formation protein HypC |Thermococcus kodakaraensis [TaxId: 311400]
d4f7da1 : (GLY50) (ILE84) [view usage] : b.43.4.0 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
d3mezb_ : (CYS34) (LEU63) [view usage] : b.78.1.0 |beta-Prism II |alpha-D-mannose-specific plant lectins |automated matches |automated matches |Crocus vernus [TaxId: 87752]
d1ty9b_ : (LEU59) (SER88) [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |Pyridoxine 5'-phoshate oxidase (PNP oxidase) |Pseudomonas fluorescens [TaxId: 294]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.80, c.10, i.1, b.47, c.77, b.40, d.169, b.45, d.15, b.43, b.33, b.78, b.5