Tableau information
Concept source: d2a22a1 amino acid (a.a.) range (LYS142)(LEU182)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS142) (GLY148) E1
(PRO163) (GLN171) E2
(ASN173) (LEU182) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -145.7° E2
E3 20.9° 162.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2cqla1 : (LEU5) (GLY29) [view usage] : d.141.1.1 |Ribosomal protein L6 |Ribosomal protein L6 |Ribosomal protein L6 |Ribosomal protein L6 |Human (Homo sapiens) [TaxId: 9606]
d2xnud_ : (ILE152) (PHE202) [view usage] : b.96.1.0 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |automated matches |California sea hare (Aplysia californica) [TaxId: 6500]
d3sq6c_ : (ASP153) (PHE200) [view usage] : b.96.1.1 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2bsya1 : (ARG8) (ASN30) [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Monomeric viral dUTPase |Epstein-Barr virus [TaxId: 10376]
d1svpa_ : (LEU231) (PRO258) [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |Viral capsid protein |Sindbis virus [TaxId: 11034]
d3cjia_ : (ARG39) (ALA82) [view usage] : b.121.4.0 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |automated matches |automated matches |Seneca valley virus [TaxId: 390157]
d2jota_ : (LEU6) (PHE30) [view usage] : g.8.1.0 |BPTI-like |BPTI-like |automated matches |automated matches |Ornithoctonus huwena [TaxId: 29017]
d4h05a_ : (VAL20) (LEU46) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Streptomyces rimosus [TaxId: 1927]
d1q15a2 : (ASN176) (ARG201) [view usage] : d.153.1.1 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Class II glutamine amidotransferases |beta-Lactam synthetase |Pectobacterium carotovorum [TaxId: 554]
d3peoj_ : (ILE154) (PHE204) [view usage] : b.96.1.0 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |automated matches |California sea hare (Aplysia californica) [TaxId: 6500]
d1vkna2 : (GLY272) (ILE305) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |N-acetyl-gamma-glutamyl-phosphate reductase ArgC |Thermotoga maritima [TaxId: 2336]
d3oojg1 : (ARG202) (ASP223) [view usage] : d.153.1.0 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |automated matches |automated matches |Escherichia coli [TaxId: 562]
d3hjjc_ : (LYS166) (LYS183) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d3hjja_ : (LYS166) (GLU187) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d1qiua2 : (VAL319) (LYS340) [view usage] : b.83.1.1 |Triple beta-spiral |Fibre shaft of virus attachment proteins |Adenovirus |Adenovirus |Human adenovirus type 2 [TaxId: 10515]
d4upda_ : (ASP505) (ILE527) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Ophiostoma piceae [TaxId: 61273]
d1w3ua_ : (MET129) (GLY166) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Phosphoserine aminotransferase, PSAT |Bacillus circulans, subsp. alkalophilus [TaxId: 1397]
d2lf2a_ : (LYS55) (GLU82) [view usage] : d.129.3.0 |TBP-like |Bet v1-like |automated matches |automated matches |Cytophaga hutchinsonii [TaxId: 269798]
d4updb_ : (ASP505) (ILE527) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Ophiostoma piceae [TaxId: 61273]
d2we2a1 : (ARG8) (THR32) [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |automated matches |Human herpesvirus 4 [TaxId: 10377]
d2cvoa2 : (SER348) (ILE381) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Putative semialdehyde dehydrogenase |Rice (Oryza sativa) [TaxId: 4530]
d1w1fa_ : (LEU38) (PHE57) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ii7b_ : (GLU112) (GLY133) [view usage] : d.159.1.4 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |DNA double-strand break repair nuclease |Mre11 |Pyrococcus furiosus [TaxId: 2261]
d2byne_ : (ILE154) (PHE204) [view usage] : b.96.1.0 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |automated matches |California sea hare (Aplysia californica) [TaxId: 6500]
d1gxca_ : (ALA94) (GLY116) [view usage] : b.26.1.2 |SMAD/FHA domain |SMAD/FHA domain |FHA domain |Chk2 kinase |Human (Homo sapiens) [TaxId: 9606]
d3sh1d_ : (ASP155) (PHE204) [view usage] : b.96.1.0 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |automated matches |California sea hare (Aplysia californica) [TaxId: 6500]
d1khre_ : (LYS148) (LYS165) [view usage] : b.81.1.3 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |Galactoside acetyltransferase-like |Xenobiotic acetyltransferase |Enterococcus faecium, VAT(D) [TaxId: 1352]
d2wo2a_ : (TRP45) (ASN74) [view usage] : b.18.1.4 |Galactose-binding domain-like |Galactose-binding domain-like |Ephrin receptor ligand binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2okda_ : (VAL10) (TYR38) [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) |Vaccinia virus [TaxId: 10245]
d1nr3a_ : (ILE97) (LEU120) [view usage] : d.236.1.1 |DNA-binding protein Tfx |DNA-binding protein Tfx |DNA-binding protein Tfx |DNA-binding protein Tfx |Methanobacterium thermoautotrophicum [TaxId: 145262]
d3oojf1 : (ARG202) (LYS224) [view usage] : d.153.1.0 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |automated matches |automated matches |Escherichia coli [TaxId: 562]
d2yvta1 : (THR231) (LEU256) [view usage] : d.159.1.6 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |TT1561-like |Uncharacterized protein Aq_1956 |Aquifex aeolicus [TaxId: 63363]
d1gt3a_ : (VAL92) (ASN123) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Odorant-binding protein |Cow (Bos taurus) [TaxId: 9913]
d1xwdf_ : (LEU109) (HIS139) [view usage] : c.10.2.7 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Ngr ectodomain-like |Follicle-stimulating hormone receptor |Human (Homo sapiens) [TaxId: 9606]
d2a6va1 : (PHE147) (MET179) [view usage] : b.29.1.13 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Lectin leg-like |Emp46p N-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3vzla_ : (ALA1) (TRP30) [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Bacillus circulans [TaxId: 1397]
d2gk3e_ : (VAL198) (SER222) [view usage] : c.23.16.9 |Flavodoxin-like |Class I glutamine amidotransferase-like |STM3548-like |Putative cytoplasmic protein STM3548 |Salmonella typhimurium [TaxId: 90371]
d2a6xa1 : (PHE147) (MET179) [view usage] : b.29.1.13 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Lectin leg-like |Emp46p N-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1evea_ : (SER490) (GLN514) [view usage] : c.69.1.1 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetylcholinesterase-like |Acetylcholinesterase |Pacific electric ray (Torpedo californica) [TaxId: 7787]
d2gk3a1 : (VAL198) (SER222) [view usage] : c.23.16.9 |Flavodoxin-like |Class I glutamine amidotransferase-like |STM3548-like |Putative cytoplasmic protein STM3548 |Salmonella typhimurium [TaxId: 90371]
d3sq6e_ : (ASP153) (PHE200) [view usage] : b.96.1.1 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1t9kc_ : (LYS2) (LEU18) [view usage] : c.124.1.5 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |IF2B-like |Probable methylthioribose-1-phosphate isomerase TM0911 |Thermotoga maritima [TaxId: 2336]
d2bt1a1 : (ALA3) (THR32) [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Monomeric viral dUTPase |Epstein-Barr virus [TaxId: 10376]
d4uonb_ : (LEU234) (HIS261) [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |Aura virus [TaxId: 44158]
d3sq6a_ : (ASP153) (PHE200) [view usage] : b.96.1.1 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1z94c_ : (LEU72) (PRO103) [view usage] : d.129.3.5 |TBP-like |Bet v1-like |AHSA1 domain |Hypothetical protein CV1439 |Chromobacterium violaceum [TaxId: 536]
d3n5id_ : (GLY162) (GLN205) [view usage] : d.154.1.0 |DmpA/ArgJ-like |DmpA/ArgJ-like |automated matches |automated matches |Sphingosinicella xenopeptidilytica [TaxId: 364098]
d3t4md_ : (ILE154) (PHE204) [view usage] : b.96.1.0 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |automated matches |California sea hare (Aplysia californica) [TaxId: 6500]
d3igja_ : (LYS166) (GLU187) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d2we0a1 : (PRO5) (THR32) [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |automated matches |Human herpesvirus 4 [TaxId: 10377]
d1s8ea_ : (GLU112) (GLY133) [view usage] : d.159.1.4 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |DNA double-strand break repair nuclease |Mre11 |Pyrococcus furiosus [TaxId: 2261]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.10, c.67, c.69, b.81, d.159, b.29, b.47, c.124, d.129, c.23, d.144, d.153, b.60, b.18, b.121, d.81, b.85, b.96, b.26, b.34,
g.8, b.83, d.154, d.141, d.236