Tableau information
Concept source: d4pbwf2 amino acid (a.a.) range (PHE133)(GLY159)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PHE133) (MET138) E1
(LEU142) (GLU146) E2
(ARG149) (GLY159) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 51.7° E2
E3 144.4° -154.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1wvza_ : (ARG7) (ALA36) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1w80a1 : (ASN765) (ILE792) [view usage] : b.1.10.1 |Immunoglobulin-like beta-sandwich |Clathrin adaptor appendage domain |Alpha-adaptin ear subdomain-like |Alpha-adaptin AP2 ear domain, N-terminal subdomain |Mouse (Mus musculus) [TaxId: 10090]
d1i7qb_ : (ALA112) (ALA150) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |Anthranilate synthase GAT subunit, TrpG |Serratia marcescens [TaxId: 615]
d3zlfa2 : (LYS140) (PRO169) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Streptococcus pyogenes [TaxId: 286636]
d1p8jc1 : (PRO446) (ALA470) [view usage] : b.18.1.20 |Galactose-binding domain-like |Galactose-binding domain-like |Proprotein convertase P-domain |Furin, C-terminal domain |Mouse (Mus musculus) [TaxId: 10090]
d4lpvb_ : (MET1) (TRP22) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Artificial gene [TaxId: 32630]
d4cdla_ : (GLN95) (CYS126) [view usage] : d.17.4.3 |Cystatin-like |NTF2-like |Ketosteroid isomerase-like |automated matches |Pseudomonas putida [TaxId: 303]
d2cx9a2 : (GLY166) (PHE192) [view usage] : e.6.1.1 |Acyl-CoA dehydrogenase NM domain-like |Acyl-CoA dehydrogenase NM domain-like |Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains |Acyl-CoA dehydrogenase |Thermus thermophilus [TaxId: 274]
d1q25a2 : (GLU256) (VAL275) [view usage] : b.64.1.1 |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |Cation-independent mannose-6-phosphate receptor (MIR-receptor) |Cow (Bos taurus) [TaxId: 9913]
d1jjua3 : (PRO276) (GLY298) [view usage] : b.1.18.14 |Immunoglobulin-like beta-sandwich |E set domains |Quinohemoprotein amine dehydrogenase A chain, domains 4 and 5 |Quinohemoprotein amine dehydrogenase A chain, domains 4 and 5 |Paracoccus denitrificans [TaxId: 266]
d1ua6h_ : (ASP1) (GLY26) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 7.2 [TaxId: 10090]
d1snza_ : (GLY303) (SER340) [view usage] : b.30.5.4 |Supersandwich |Galactose mutarotase-like |Aldose 1-epimerase (mutarotase) |Galactose mutarotase |Human (Homo sapiens) [TaxId: 9606]
d2moua_ : (ASN142) (GLY177) [view usage] : d.129.3.0 |TBP-like |Bet v1-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1xx9c_ : (ASN51) (PHE74) [view usage] : b.16.1.1 |Ecotin, trypsin inhibitor |Ecotin, trypsin inhibitor |Ecotin, trypsin inhibitor |Ecotin, trypsin inhibitor |Escherichia coli [TaxId: 562]
d1qnzl_ : (ASP1) (SER26) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain kappa variable domain, VL-kappa |Mouse (Mus musculus), cluster 2 [TaxId: 10090]
d1z92b2 : (GLY134) (GLY165) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Interleukin-2 receptor alpha chain |Human (Homo sapiens) [TaxId: 9606]
d1cf8h1 : (VAL2) (GLY26) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 7.1 [TaxId: 10090]
d4ghqa_ : (GLY155) (ARG176) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Human enterovirus 71 [TaxId: 39054]
d2z2lb_ : (GLY472) (GLY500) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |Penicillin-binding protein 2x (pbp-2x), transpeptidase domain |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2vjxb2 : (GLY821) (SER843) [view usage] : b.1.4.0 |Immunoglobulin-like beta-sandwich |beta-Galactosidase/glucuronidase domain |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 226186]
d2l8aa_ : (ILE354) (GLN375) [view usage] : b.2.2.0 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d2wbkb5 : (GLY821) (SER843) [view usage] : b.1.4.0 |Immunoglobulin-like beta-sandwich |beta-Galactosidase/glucuronidase domain |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 226186]
d1ncwh1 : (ARG1) (GLY26) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 7.1 [TaxId: 10090]
d3zlga2 : (LYS140) (PRO169) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Streptococcus pyogenes [TaxId: 286636]
d1nkwp_ : (GLY66) (GLN99) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Prokaryotic (50S subunit) |Deinococcus radiodurans [TaxId: 1299]
d3zlfc2 : (LYS140) (PRO169) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Streptococcus pyogenes [TaxId: 286636]
d1k8fa_ : (GLY446) (GLY475) [view usage] : b.80.5.1 |Single-stranded right-handed beta-helix |C-terminal domain of adenylylcyclase associated protein |C-terminal domain of adenylylcyclase associated protein |C-terminal domain of adenylylcyclase associated protein |Human (Homo sapiens) [TaxId: 9606]
d1p8jb1 : (GLN447) (ALA470) [view usage] : b.18.1.20 |Galactose-binding domain-like |Galactose-binding domain-like |Proprotein convertase P-domain |Furin, C-terminal domain |Mouse (Mus musculus) [TaxId: 10090]
d1p4ua_ : (SER651) (VAL679) [view usage] : b.1.10.2 |Immunoglobulin-like beta-sandwich |Clathrin adaptor appendage domain |gamma-adaptin C-terminal appendage domain-like |ADP-ribosylation factor binding protein Gga3 domain |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.80, e.3, c.1, i.1, b.30, b.47, d.129, c.23, e.6, b.18, b.2, b.1, d.17, g.18, b.16, b.64