Tableau information
Concept source: d4onhb1 amino acid (a.a.) range (ASN30)(LYS57)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASN30) (PRO39) E1
(ILE46) (VAL50) E2
(GLY53) (LYS57) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -165.4° E2
E3 -32.2° 141.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3hjjb_ : (LYS166) (GLU187) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d3dema1 : (GLY10) (PHE43) [view usage] : b.23.1.0 |CUB-like |Spermadhesin, CUB domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2oq0a1 : (HIS136) (GLY162) [view usage] : b.40.16.1 |OB-fold |HIN-2000 domain-like |HIN-200/IF120x domain |Gamma-interferon-inducible protein Ifi-16 |Human (Homo sapiens) [TaxId: 9606]
d1c9pb_ : (PRO12) (CYS33) [view usage] : g.3.15.1 |Knottins (small inhibitors, toxins, lectins) |Leech antihemostatic proteins |Huristasin-like |Bdellastasin |Medicinal leech (Hirudo medicinalis) [TaxId: 6421]
d4iosb_ : (LYS65) (ILE90) [view usage] : b.21.1.3 |Virus attachment protein globular domain |Virus attachment protein globular domain |Lactophage receptor-binding protein head domain |automated matches |Lactococcus phage [TaxId: 35345]
d3ejca2 : (PRO63) (ILE90) [view usage] : b.21.1.3 |Virus attachment protein globular domain |Virus attachment protein globular domain |Lactophage receptor-binding protein head domain |automated matches |Lactococcus phage [TaxId: 35345]
d4rqpc_ : (PRO248) (VAL286) [view usage] : b.121.4.0 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |automated matches |automated matches |Enterovirus a71 [TaxId: 39054]
d1ihna_ : (SER13) (SER29) [view usage] : c.103.1.1 |MTH938-like |MTH938-like |MTH938-like |Hypothetical protein MT938 (MTH938) |Methanobacterium thermoautotrophicum [TaxId: 145262]
d3qhtc_ : (VAL11) (GLY37) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Artificial gene [TaxId: 32630]
d2llla_ : (GLU457) (GLY479) [view usage] : b.1.16.0 |Immunoglobulin-like beta-sandwich |Lamin A/C globular tail domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4um9a2 : (PRO519) (LEU563) [view usage] : b.1.15.0 |Immunoglobulin-like beta-sandwich |Integrin domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3vbfb_ : (PRO179) (VAL217) [view usage] : b.121.4.0 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |automated matches |automated matches |Human enterovirus 71 [TaxId: 39054]
d4fyqa3 : (PHE612) (ASP635) [view usage] : b.1.30.0 |Immunoglobulin-like beta-sandwich |Zn aminopeptidase insert domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4kn9l_ : (ASN247) (GLU277) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |automated matches |Desulfomicrobium baculatum [TaxId: 525897]
d1e4ft1 : (GLU142) (PRO166) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Cell division protein FtsA |Thermotoga maritima [TaxId: 2336]
d3vbob_ : (PRO248) (VAL286) [view usage] : b.121.4.0 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |automated matches |automated matches |Enterovirus a71 [TaxId: 39054]
d1kxvc_ : (GLN3) (ASP33) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Camelid IG heavy chain variable domain, VHh |Camel (Camelus dromedarius) [TaxId: 9838]
d1fnfa4 : (VAL1426) (GLU1453) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Fibronectin, different Fn3 modules |Human (Homo sapiens) [TaxId: 9606]
d4l5qa2 : (GLU177) (LYS203) [view usage] : b.40.16.0 |OB-fold |HIN-2000 domain-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3zfeb_ : (PRO179) (VAL217) [view usage] : b.121.4.0 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |automated matches |automated matches |Human enterovirus 71 [TaxId: 39054]
d1c9tg_ : (PRO12) (CYS33) [view usage] : g.3.15.1 |Knottins (small inhibitors, toxins, lectins) |Leech antihemostatic proteins |Huristasin-like |Bdellastasin |Medicinal leech (Hirudo medicinalis) [TaxId: 6421]
d1oowa_ : (PHE19) (PHE41) [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Plastocyanin |Spinach (Spinacia oleracea) [TaxId: 3562]
d1frvb_ : (SER278) (ASP313) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |Nickel-iron hydrogenase, large subunit |Desulfovibrio gigas [TaxId: 879]
d2xzme_ : (VAL138) (VAL171) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Tetrahymena thermophila [TaxId: 5911]
d1n9wa1 : (HIS23) (GLY49) [view usage] : b.40.4.1 |OB-fold |Nucleic acid-binding proteins |Anticodon-binding domain |Aspartyl-tRNA synthetase (AspRS) |Thermus thermophilus, AspRS-2 [TaxId: 274]
d4hlta_ : (SER4) (ARG49) [view usage] : b.82.1.12 |Double-stranded beta-helix |RmlC-like cupins |Pirin-like |Pirin |Human (Homo sapiens) [TaxId: 9606]
d3iucc1 : (GLY32) (ASN55) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4ir8b_ : (ALA153) (GLU179) [view usage] : e.7.1.0 |Carbohydrate phosphatase |Carbohydrate phosphatase |automated matches |automated matches |Toxoplasma gondii [TaxId: 508771]
d1twba_ : (GLY60) (PRO85) [view usage] : b.136.1.1 |SspB-like |SspB-like |Stringent starvation protein B, SspB |Stringent starvation protein B, SspB |Haemophilus influenzae [TaxId: 727]
d1qzga_ : (LYS50) (LYS90) [view usage] : b.40.4.3 |OB-fold |Nucleic acid-binding proteins |Single strand DNA-binding domain, SSB |Protection of telomeres protein 1, Pot1 |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d3sjza1 : (GLY31) (ARG87) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Sulfolobus solfataricus [TaxId: 273057]
d3t50a_ : (LYS93) (ASP134) [view usage] : d.110.3.0 |Profilin-like |PYP-like sensor domain (PAS domain) |automated matches |automated matches |Brucella melitensis [TaxId: 29459]
d1hn0a4 : (LEU785) (ASN806) [view usage] : b.30.5.2 |Supersandwich |Galactose mutarotase-like |Hyaluronate lyase-like, central domain |Chondroitin ABC lyase I |Proteus vulgaris [TaxId: 585]
d3oxog1 : (ILE133) (GLU162) [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |automated matches |Pig (Sus scrofa) [TaxId: 9823]
d3oojd1 : (ILE211) (GLU235) [view usage] : d.153.1.0 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |automated matches |automated matches |Escherichia coli [TaxId: 562]
d2gp4a1 : (LEU420) (ALA446) [view usage] : c.8.2.2 |The "swivelling" beta/beta/alpha domain |LeuD/IlvD-like |IlvD/EDD C-terminal domain-like |6-phosphogluconate dehydratase EDD |Shewanella oneidensis [TaxId: 70863]
d4eera_ : (ARG450) (ASP491) [view usage] : d.110.3.6 |Profilin-like |PYP-like sensor domain (PAS domain) |Flavin-binding PAS domain |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d4r4ya_ : (ASP151) (ASP183) [view usage] : d.153.1.5 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |(Glycosyl)asparaginase |Glycosylasparaginase (aspartylglucosaminidase, AGA) |Elizabethkingia miricola [TaxId: 172045]
d2pmpa_ : (PRO3) (HIS30) [view usage] : d.79.5.1 |Bacillus chorismate mutase-like |IpsF-like |IpsF-like |2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.82, b.81, i.1, b.30, c.124, e.18, b.40, c.37, c.55, d.153, b.121, b.6, e.7, b.1, d.110, c.8, b.21, d.79, b.136, b.23,
c.103, g.3