Tableau information
Concept source: d4fk8a1 amino acid (a.a.) range (LYS18)(THR38)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS18) (THR23) E1
(LEU25) (THR31) E2
(THR33) (THR38) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -83.3° E2
E3 93.7° 160.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2xnja1 : (ALA2) (HIS25) [view usage] : b.43.4.0 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1fy7a_ : (ALA162) (TYR181) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Histone acetyltransferase ESA1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1tgsz_ : (GLN135) (PRO152) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Trypsin(ogen) |Cow (Bos taurus) [TaxId: 9913]
d1b3qa2 : (THR540) (PRO559) [view usage] : b.40.7.1 |OB-fold |CheW-like |CheW-like |Histidine kinase CheA, C-terminal domain |Thermotoga maritima [TaxId: 2336]
d3sjna2 : (THR323) (ASP354) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Shewanella pealeana [TaxId: 398579]
d3uoka_ : (ASP132) (LEU149) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Aurora-related kinase 1 (aurora-2) |Human (Homo sapiens) [TaxId: 9606]
d1oifa_ : (LYS309) (GLU329) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Beta-glucosidase A |Thermotoga maritima [TaxId: 2336]
d4gk1a_ : (GLU231) (ALA270) [view usage] : d.169.1.0 |C-type lectin-like |C-type lectin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3gpba_ : (LEU198) (VAL216) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d2w1va_ : (GLY129) (LYS150) [view usage] : d.160.1.0 |Carbon-nitrogen hydrolase |Carbon-nitrogen hydrolase |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1viwa2 : (ASN98) (ALA122) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Animal alpha-amylase |Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]
d2c8fe_ : (HIS220) (ALA241) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |automated matches |Clostridium botulinum [TaxId: 1491]
d1opja_ : (ASN377) (GLY402) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Abelsone tyrosine kinase (abl) |Mouse (Mus musculus) [TaxId: 10090]
d1erza_ : (VAL104) (LYS126) [view usage] : d.160.1.2 |Carbon-nitrogen hydrolase |Carbon-nitrogen hydrolase |Carbamilase |N-carbamoyl-D-aminoacid amidohydrolase |Agrobacterium sp. [TaxId: 361]
d4mmwa2 : (ARG326) (ARG364) [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
d1cqxa2 : (GLY153) (PRO176) [view usage] : b.43.4.2 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |Ferredoxin reductase FAD-binding domain-like |Flavohemoglobin, central domain |Alcaligenes eutrophus [TaxId: 106590]
d1d8ta1 : (PRO209) (ARG230) [view usage] : b.43.3.1 |Reductase/isomerase/elongation factor common domain |Translation proteins |Elongation factors |Elongation factor Tu (EF-Tu), domain 2 |Escherichia coli [TaxId: 562]
d2qmhj_ : (GLU224) (PRO266) [view usage] : c.91.1.2 |PEP carboxykinase-like |PEP carboxykinase-like |HPr kinase HprK C-terminal domain |HPr kinase HprK C-terminal domain |Lactobacillus casei [TaxId: 1582]
d4bqfb_ : (PHE201) (TRP219) [view usage] : c.87.1.0 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1usca_ : (TYR115) (ARG137) [view usage] : b.45.1.2 |Split barrel-like |FMN-binding split barrel |NADH:FMN oxidoreductase-like |Putative styrene monooxygenase small component |Thermus thermophilus [TaxId: 274]
d2anea1 : (GLN96) (LYS113) [view usage] : b.122.1.10 |PUA domain-like |PUA domain-like |LON domain-like |ATP-dependent protease La (Lon), N-terminal domain |Escherichia coli [TaxId: 562]
d2fc7a1 : (VAL17) (PRO31) [view usage] : g.44.1.6 |RING/U-box |RING/U-box |ZZ domain |Zinc finger ZZ-type-containing protein 3, ZZZ3 |Human (Homo sapiens) [TaxId: 9606]
d1a8pa1 : (ASN3) (THR25) [view usage] : b.43.4.2 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |Ferredoxin reductase FAD-binding domain-like |Ferredoxin reductase (flavodoxin reductase) N-terminal domain |Azotobacter vinelandii [TaxId: 354]
d1wp5a_ : (LYS133) (THR152) [view usage] : b.68.10.1 |6-bladed beta-propeller |GyrA/ParC C-terminal domain-like |GyrA/ParC C-terminal domain-like |Topoisomerase IV subunit A, ParC, C-terminal domain |Bacillus stearothermophilus [TaxId: 1422]
d2rdxa1 : (SER0) (THR29) [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Roseovarius nubinhibens [TaxId: 89187]
d1mvma_ : (LYS204) (PRO240) [view usage] : b.121.5.2 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |ssDNA viruses |Parvoviridae-like VP |Parvovirus (panleukopenia virus) capsid protein |Murine minute virus, strain i [TaxId: 10794]
d2d04a_ : (LEU62) (PRO99) [view usage] : b.78.1.0 |beta-Prism II |alpha-D-mannose-specific plant lectins |automated matches |automated matches |Curculigo latifolia [TaxId: 4676]
d3ouua2 : (GLY268) (ARG293) [view usage] : d.142.1.0 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d4deba_ : (ASP132) (LEU149) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Aurora-related kinase 1 (aurora-2) |Human (Homo sapiens) [TaxId: 9606]
d1tvca1 : (GLY10) (LYS33) [view usage] : b.43.4.2 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |Ferredoxin reductase FAD-binding domain-like |Methane monooxygenase component C, MmoC |Methylococcus capsulatus [TaxId: 414]
d1w3ja_ : (LYS309) (GLU329) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Beta-glucosidase A |Thermotoga maritima [TaxId: 2336]
d1bwup_ : (ASN6) (LEU33) [view usage] : b.78.1.1 |beta-Prism II |alpha-D-mannose-specific plant lectins |alpha-D-mannose-specific plant lectins |Lectin (agglutinin) |Garlic (Allium sativum) [TaxId: 4682]
d2hq7a1 : (TYR116) (LYS138) [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |Hypotheical protein CAC3491 |Clostridium acetobutylicum [TaxId: 1488]
d1ddma_ : (ARG113) (ASP132) [view usage] : b.55.1.2 |PH domain-like barrel |PH domain-like |Phosphotyrosine-binding domain (PTB) |Numb |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1r61a_ : (ALA0) (ASP43) [view usage] : c.8.8.1 |The "swivelling" beta/beta/alpha domain |Putative cyclase |Putative cyclase |Unnamed protein |Bacillus stearothermophilus [TaxId: 1422]
d2ge4a_ : (ALA1) (ASN46) [view usage] : f.4.1.1 |Transmembrane beta-barrels |OMPA-like |Outer membrane protein |Outer membrane protein A (OMPA) transmembrane domain |Escherichia coli [TaxId: 562]
d1sddb4 : (GLN2040) (PRO2057) [view usage] : b.18.1.2 |Galactose-binding domain-like |Galactose-binding domain-like |Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) |C2 domain of factor V |Cow (Bos taurus) [TaxId: 9913]
d2qmhh_ : (GLU224) (PRO266) [view usage] : c.91.1.2 |PEP carboxykinase-like |PEP carboxykinase-like |HPr kinase HprK C-terminal domain |HPr kinase HprK C-terminal domain |Lactobacillus casei [TaxId: 1582]
d1k0sa_ : (LYS9) (PHE25) [view usage] : b.40.7.1 |OB-fold |CheW-like |CheW-like |Chemotaxis protein CheW |Thermotoga maritima [TaxId: 2336]
d1ks9a2 : (PRO112) (HIS131) [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Ketopantoate reductase PanE |Escherichia coli [TaxId: 562]
d2x4mc_ : (GLN135) (PRO160) [view usage] : f.4.4.0 |Transmembrane beta-barrels |OMPT-like |automated matches |automated matches |Yersinia pestis [TaxId: 632]
d2x4mc_ : (VAL165) (ASP198) [view usage] : f.4.4.0 |Transmembrane beta-barrels |OMPT-like |automated matches |automated matches |Yersinia pestis [TaxId: 632]
d1chua3 : (ASN241) (GLU260) [view usage] : d.168.1.1 |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |L-aspartate oxidase |Escherichia coli [TaxId: 562]
d4io4b_ : (LEU10) (GLY39) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Adineta vaga [TaxId: 104782]
d4mgga1 : (HIS0) (GLU29) [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Labrenzia aggregata [TaxId: 384765]
d2b42b_ : (ALA165) (VAL182) [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Bacillus circulans [TaxId: 1397]
d1c8fa_ : (PRO207) (GLY235) [view usage] : b.121.5.2 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |ssDNA viruses |Parvoviridae-like VP |Parvovirus (panleukopenia virus) capsid protein |Feline parvovirus [TaxId: 10785]
d1na7a_ : (ASP38) (GLU55) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Protein kinase CK2, alpha subunit |Human (Homo sapiens) [TaxId: 9606]
d3q45a2 : (CYS315) (THR347) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Cytophaga hutchinsonii [TaxId: 269798]
d2ocea4 : (GLY702) (MET723) [view usage] : b.40.4.5 |OB-fold |Nucleic acid-binding proteins |Cold shock DNA-binding domain-like |Tex S1-domain |Pseudomonas aeruginosa [TaxId: 287]
d1abrb1 : (LEU53) (ILE82) [view usage] : b.42.2.1 |beta-Trefoil |Ricin B-like lectins |Ricin B-like |Plant cytotoxin B-chain (lectin) |Abrus precatorius [TaxId: 3816]
d2qmhb_ : (GLU224) (PRO266) [view usage] : c.91.1.2 |PEP carboxykinase-like |PEP carboxykinase-like |HPr kinase HprK C-terminal domain |HPr kinase HprK C-terminal domain |Lactobacillus casei [TaxId: 1582]
d1e4oa_ : (ASP176) (GLU194) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Maltodextrin phosphorylase (MALP) |Escherichia coli [TaxId: 562]
d2m8ca_ : (GLN7) (PHE32) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Escherichia coli [TaxId: 536056]
d1d1na_ : (ILE148) (TYR169) [view usage] : b.43.3.1 |Reductase/isomerase/elongation factor common domain |Translation proteins |Elongation factors |Initiation factor IF2/eIF5b, domains 2 and 4 |Bacillus stearothermophilus [TaxId: 1422]
d4ptva_ : (ASN311) (GLN332) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Halothermothrix orenii [TaxId: 373903]
d3w2ea1 : (ILE12) (ALA34) [view usage] : b.43.4.2 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |Ferredoxin reductase FAD-binding domain-like |cytochrome b5 reductase |Pig (Sus scrofa), liver [TaxId: 9823]
d3el9a_ : (ASP30) (LYS55) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |automated matches |Hiv-1 m:b_arv2/sf2 [TaxId: 11685]
d1rz0a_ : (LEU107) (GLU129) [view usage] : b.45.1.2 |Split barrel-like |FMN-binding split barrel |NADH:FMN oxidoreductase-like |Phenol 2-hydroxylase component B (PheA2) |Geobacillus thermoglucosidasius [TaxId: 1426]
d4f7da1 : (LYS18) (THR38) [view usage] : b.43.4.0 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
d1ln2a_ : (GLY148) (ASN178) [view usage] : d.129.3.2 |TBP-like |Bet v1-like |STAR domain |Phosphatidylcholine transfer protein |Human (Homo sapiens) [TaxId: 9606]
d4hcha2 : (ARG326) (VAL361) [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
d1mj9a_ : (ALA162) (TYR181) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Histone acetyltransferase ESA1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1a62a2 : (ASP95) (LYS115) [view usage] : b.40.4.5 |OB-fold |Nucleic acid-binding proteins |Cold shock DNA-binding domain-like |Rho termination factor, RNA-binding domain |Escherichia coli [TaxId: 562]
d2qcka_ : (ALA114) (VAL135) [view usage] : b.45.1.0 |Split barrel-like |FMN-binding split barrel |automated matches |automated matches |Arthrobacter sp. [TaxId: 290399]
d2bgia1 : (PRO16) (THR37) [view usage] : b.43.4.0 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |automated matches |automated matches |Rhodobacter capsulatus [TaxId: 1061]
d1i0ad_ : (PHE270) (ASP291) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Turkey (Meleagris gallopavo), delta-crystallin [TaxId: 9103]
d2qdxa1 : (ASN3) (THR25) [view usage] : b.43.4.2 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |Ferredoxin reductase FAD-binding domain-like |Ferredoxin reductase (flavodoxin reductase) N-terminal domain |Pseudomonas aeruginosa [TaxId: 287]
d1fc5a2 : (GLU109) (ALA128) [view usage] : b.103.1.1 |MoeA N-terminal region -like |MoeA N-terminal region -like |MoeA N-terminal region -like |Molybdenum cofactor biosynthesis protein MoeA, N-terminal and linker domains |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, c.1, c.94, c.2, b.29, b.47, a.127, b.50, d.129, f.4, d.144, b.40, d.166, b.18, d.169, b.121, c.87, b.122, d.160, b.45,
d.108, b.42, c.8, b.55, d.142, d.168, c.91, b.43, d.54, g.44, b.78, b.103