Tableau information
Concept source: d4j3ga_ amino acid (a.a.) range (GLY137)(LEU164)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY137) (GLY142) E1
(VAL147) (PHE151) E2
(ARG153) (LEU164) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -94.4° E2
E3 139.2° 126.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2nxda_ : (ASP30) (GLY49) [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 1 protease |Hiv-1 m:b_arv2/sf2 [TaxId: 11685]
d3czvb_ : (PHE66) (GLN92) [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1w52x2 : (TYR342) (SER365) [view usage] : b.12.1.0 |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Lipase/lipooxygenase domain (PLAT/LH2 domain) |automated matches |automated matches |Horse (Equus caballus) [TaxId: 9796]
d2jalb_ : (LYS309) (GLU329) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |automated matches |Thermotoga maritima [TaxId: 2336]
d4mc5c1 : (ASP113) (ASN150) [view usage] : b.19.1.0 |Viral protein domain |Viral protein domain |automated matches |automated matches |Influenza A virus [TaxId: 11320]
d2ht5a_ : (TRP438) (ASP460) [view usage] : b.68.1.0 |6-bladed beta-propeller |Sialidases |automated matches |automated matches |Influenza A virus [TaxId: 11320]
d1hcca_ : (GLU1) (TYR25) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Factor H, 15th and 16th modules |Human (Homo sapiens) [TaxId: 9606]
d4k3xa_ : (ASP116) (ASN150) [view usage] : b.19.1.0 |Viral protein domain |Viral protein domain |automated matches |automated matches |Influenza A virus [TaxId: 11320]
d1rj7a_ : (ALA249) (ILE277) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Ectodysplasin A, Eda-a1 |Human (Homo sapiens) [TaxId: 9606]
d4gfga_ : (LEU370) (LYS393) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Tyrosine-protein kinase SYK |Human (Homo sapiens) [TaxId: 9606]
d1hfha1 : (GLU1) (HIS28) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Factor H, 15th and 16th modules |Human (Homo sapiens) [TaxId: 9606]
d2jlme_ : (GLY146) (ASP174) [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Acinetobacter baylyi [TaxId: 202950]
d1f1ha1 : (SER63) (GLU93) [view usage] : d.15.9.1 |beta-Grasp (ubiquitin-like) |Glutamine synthetase, N-terminal domain |Glutamine synthetase, N-terminal domain |Glutamine synthetase, N-terminal domain |Salmonella typhimurium [TaxId: 90371]
d1jzdc_ : (HIS52) (ASP79) [view usage] : b.1.17.1 |Immunoglobulin-like beta-sandwich |Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) |Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) |Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) |Escherichia coli [TaxId: 562]
d4j3gd_ : (GLY137) (LEU164) [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Brucella melitensis [TaxId: 359391]
d4jxqa_ : (GLY138) (PRO164) [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d2z0za_ : (GLY145) (LEU172) [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d3czva_ : (PHE66) (GLN92) [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4j3gc_ : (GLY137) (LEU164) [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Brucella melitensis [TaxId: 359391]
d1mwpa_ : (THR83) (VAL123) [view usage] : d.170.2.1 |SRCR-like |A heparin-binding domain |A heparin-binding domain |N-terminal domain of the amyloid precursor protein |Human (Homo sapiens) [TaxId: 9606]
d4o5hc_ : (GLY371) (ASP395) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d4j3ga_ : (GLY137) (LEU164) [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Brucella melitensis [TaxId: 359391]
d1oxua1 : (GLU243) (ARG277) [view usage] : b.40.6.3 |OB-fold |MOP-like |ABC-transporter additional domain |Glucose transport protein GlcV, N-terminal domain |Sulfolobus solfataricus [TaxId: 2287]
d4jwpa_ : (GLY137) (LEU164) [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Brucella abortus [TaxId: 359391]
d2euaa1 : (THR302) (THR325) [view usage] : d.161.1.1 |ADC synthase |ADC synthase |ADC synthase |Menaquinone-specific isochorismate synthase MenF |Escherichia coli [TaxId: 562]
d3fz2d_ : (THR103) (GLU133) [view usage] : d.323.1.1 |Phage tail protein-like |Phage tail protein-like |Lambda phage gpU-like |automated matches |Enterobacteria phage [TaxId: 10710]
d1gpza2 : (ILE290) (PHE313) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Complement C1R protease domains |Human (Homo sapiens) [TaxId: 9606]
d2ge3b_ : (GLY141) (PHE168) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |automated matches |Agrobacterium tumefaciens [TaxId: 358]
d2ge3d_ : (GLY141) (PHE168) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |automated matches |Agrobacterium tumefaciens [TaxId: 358]
d2l2ga_ : (GLY1580) (ASP1609) [view usage] : b.64.1.1 |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |automated matches |Monodelphis domestica [TaxId: 13616]
d1p85a_ : (GLY72) (LEU94) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |70S ribosome functional complex |Escherichia coli [TaxId: 562]
d1m6ua_ : (PRO68) (ARG97) [view usage] : b.2.5.7 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |DNA-binding domain from NDT80 |DNA-binding domain from NDT80 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4ewla_ : (ALA269) (ASP291) [view usage] : c.134.1.1 |LmbE-like |LmbE-like |LmbE-like |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, c.1, b.19, i.1, c.82, b.74, b.50, d.144, b.40, b.2, b.1, d.108, b.22, d.15, g.18, b.12, c.134, d.161, b.64, d.323,
d.170