Tableau information
Concept source: d1gwkb_ amino acid (a.a.) range (GLY61)(VAL77)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY61) (ASP66) E1
(ASP66) (GLU70) E2
(LYS72) (VAL77) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 62.0° E2
E3 143.0° 139.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3o4ga1 : (GLY283) (LEU302) [view usage] : b.69.7.2 |7-bladed beta-propeller |Peptidase/esterase 'gauge' domain |Acylamino-acid-releasing enzyme, N-terminal donain |Acylamino-acid-releasing enzyme, N-terminal donain |Aeropyrum pernix [TaxId: 56636]
d1q97b_ : (ILE225) (GLU247) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Sky1p |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3vehb_ : (ALA318) (ALA341) [view usage] : d.161.1.1 |ADC synthase |ADC synthase |ADC synthase |Salicylate synthase MbtI |Mycobacterium tuberculosis [TaxId: 1773]
d1fb1a_ : (GLU128) (LYS160) [view usage] : d.96.1.1 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |GTP cyclohydrolase I |GTP cyclohydrolase I |Human (Homo sapiens) [TaxId: 9606]
d3st6a_ : (SER317) (ALA341) [view usage] : d.161.1.1 |ADC synthase |ADC synthase |ADC synthase |Salicylate synthase MbtI |Mycobacterium tuberculosis [TaxId: 1773]
d3p54a2 : (GLU306) (GLY330) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Japanese encephalitis virus [TaxId: 11072]
d1a39a_ : (LYS7) (LEU33) [view usage] : b.29.1.10 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolase family 7 catalytic core |Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) |Humicola insolens, Cel7b [TaxId: 34413]
d1giqa1 : (SER184) (ASN209) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Enzymatic component (Ia) of iota-toxin |Clostridium perfringens [TaxId: 1502]
d1qmea4 : (VAL473) (GLY500) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |Penicillin-binding protein 2x (pbp-2x), transpeptidase domain |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d4lb0b_ : (PRO148) (GLY174) [view usage] : d.21.1.0 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |automated matches |automated matches |Agrobacterium vitis [TaxId: 311402]
d2lj4a_ : (GLY99) (ARG116) [view usage] : d.26.1.0 |FKBP-like |FKBP-like |automated matches |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d1gu3a_ : (GLY15) (GLY51) [view usage] : b.18.1.14 |Galactose-binding domain-like |Galactose-binding domain-like |CBM4/9 |Cellulose-binding domain of cellulase C |Cellulomonas fimi [TaxId: 1708]
d3o4gc1 : (GLY283) (LEU302) [view usage] : b.69.7.2 |7-bladed beta-propeller |Peptidase/esterase 'gauge' domain |Acylamino-acid-releasing enzyme, N-terminal donain |Acylamino-acid-releasing enzyme, N-terminal donain |Aeropyrum pernix [TaxId: 56636]
d2cgya_ : (ARG1) (LEU31) [view usage] : b.154.1.1 |HPA-like |Agglutinin HPA-like |Agglutinin HPA-like |automated matches |Roman snail (Helix pomatia) [TaxId: 6536]
d2qyza_ : (VAL51) (GLU68) [view usage] : b.172.1.0 |YopX-like |YopX-like |automated matches |automated matches |Clostridium tetani [TaxId: 212717]
d1uuna_ : (LEU36) (PHE70) [view usage] : f.6.1.2 |Leukocidin-like |Leukocidin-like |Porin MspA |Porin MspA |Mycobacterium smegmatis [TaxId: 1772]
d3pvja_ : (PRO180) (ASN201) [view usage] : b.82.2.5 |Double-stranded beta-helix |Clavaminate synthase-like |TauD/TfdA-like |automated matches |Pseudomonas putida [TaxId: 160488]
d2cnaa_ : (ASP145) (SER168) [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Concanavalin A |Jack bean (Canavalia ensiformis) [TaxId: 3823]
d1ojja_ : (LYS7) (LEU33) [view usage] : b.29.1.10 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolase family 7 catalytic core |Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) |Humicola insolens, Cel7b [TaxId: 34413]
d1qgc2_ : (LEU179) (ASN207) [view usage] : i.6.1.1 |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |FMDV complexed with a neutralizing Fab fragment |Foot-and-mouth disease virus [TaxId: 12110]
d1efxd2 : (THR170) (ILE200) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Killer cell inhibitory receptor |Human (Homo sapiens), kir2dl3 [TaxId: 9606]
d1tloa_ : (HIS272) (TRP298) [view usage] : d.3.1.3 |Cysteine proteinases |Cysteine proteinases |Calpain large subunit, catalytic domain (domain II) |Calpain large subunit, catalytic domain (domain II) |Norway rat (Rattus norvegicus), mu-type [TaxId: 10116]
d2p0ra_ : (HIS254) (TRP280) [view usage] : d.3.1.3 |Cysteine proteinases |Cysteine proteinases |Calpain large subunit, catalytic domain (domain II) |Calpain large subunit, catalytic domain (domain II) |Human (Homo sapiens) [TaxId: 9606]
d3hyqa_ : (ASP94) (SER127) [view usage] : d.113.1.2 |Nudix |Nudix |IPP isomerase-like |Isopentenyl diphosphate isomerase |Salmonella enterica [TaxId: 99287]
d3hqxa_ : (VAL9) (PHE30) [view usage] : b.82.1.0 |Double-stranded beta-helix |RmlC-like cupins |automated matches |automated matches |Acinetobacter sp. [TaxId: 62977]
d2a39a_ : (LYS7) (LEU33) [view usage] : b.29.1.10 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolase family 7 catalytic core |Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) |Humicola insolens, Cel7b [TaxId: 34413]
d1tg8a1 : (GLY304) (GLY328) [view usage] : b.1.18.4 |Immunoglobulin-like beta-sandwich |E set domains |Class II viral fusion proteins C-terminal domain |Envelope glycoprotein |Dengue virus type 2 [TaxId: 11060]
d1ojia_ : (LYS7) (LEU33) [view usage] : b.29.1.10 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolase family 7 catalytic core |Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) |Humicola insolens, Cel7b [TaxId: 34413]
d4bz2a_ : (GLY304) (GLY328) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Dengue virus 4 [TaxId: 11070]
d3logd_ : (ALA318) (ALA341) [view usage] : d.161.1.1 |ADC synthase |ADC synthase |ADC synthase |Salicylate synthase MbtI |Mycobacterium tuberculosis [TaxId: 1773]
d1dyma_ : (LYS7) (LEU33) [view usage] : b.29.1.10 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolase family 7 catalytic core |Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) |Humicola insolens, Cel7b [TaxId: 34413]
d3h8na2 : (THR170) (THR200) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2esvd2 : (GLN118) (THR141) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Human (Homo sapiens), alpha-chain [TaxId: 9606]
d1m4ka2 : (THR170) (THR200) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Killer cell inhibitory receptor |Human (Homo sapiens), kir2ds3, CD158j [TaxId: 9606]
d1qa7a_ : (ALA141) (VAL157) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |3C cysteine protease (picornain 3C) |Human hepatitis A virus [TaxId: 208726]
d1b3ta_ : (CYS531) (PHE565) [view usage] : d.58.8.1 |Ferredoxin-like |Viral DNA-binding domain |Viral DNA-binding domain |Epstein barr virus nuclear antigen-1 (ebna1) |Epstein-Barr virus [TaxId: 10376]
d1nmva2 : (GLY144) (ARG161) [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |Mitotic rotamase PIN1, domain 2 |Human (Homo sapiens) [TaxId: 9606]
d3sd0b_ : (SER35) (ASP58) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Glycogen synthase kinase-3 beta (Gsk3b) |Human (Homo sapiens) [TaxId: 9606]
d3sd0b_ : (ILE109) (VAL131) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Glycogen synthase kinase-3 beta (Gsk3b) |Human (Homo sapiens) [TaxId: 9606]
d1wm9a1 : (GLU95) (GLY127) [view usage] : d.96.1.1 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |GTP cyclohydrolase I |GTP cyclohydrolase I |Thermus thermophilus [TaxId: 274]
d3pvjb_ : (PRO180) (ASN201) [view usage] : b.82.2.5 |Double-stranded beta-helix |Clavaminate synthase-like |TauD/TfdA-like |automated matches |Pseudomonas putida [TaxId: 160488]
d1tl9a_ : (HIS272) (TRP298) [view usage] : d.3.1.3 |Cysteine proteinases |Cysteine proteinases |Calpain large subunit, catalytic domain (domain II) |Calpain large subunit, catalytic domain (domain II) |Norway rat (Rattus norvegicus), mu-type [TaxId: 10116]
d1v6ea_ : (SER3) (SER26) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Ubiquitin-like domain of tubulin folding cofactor B |Mouse (Mus musculus) [TaxId: 10090]
d1oana1 : (GLY304) (GLY328) [view usage] : b.1.18.4 |Immunoglobulin-like beta-sandwich |E set domains |Class II viral fusion proteins C-terminal domain |Envelope glycoprotein |Dengue virus type 2 [TaxId: 11060]
d1slia1 : (LEU86) (ASP103) [view usage] : b.29.1.9 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Leech intramolecular trans-sialidase, N-terminal domain |Leech intramolecular trans-sialidase, N-terminal domain |North american leech (Macrobdella decora) [TaxId: 6405]
d2fqmf_ : (ASP107) (PRO127) [view usage] : d.378.1.1 |Phosphoprotein oligomerization domain-like |Phosphoprotein oligomerization domain-like |Phosphoprotein oligomerization domain-like |Phosphoprotein P (M1) |Vesicular stomatitis indiana virus [TaxId: 11277]
d1u79a_ : (LEU32) (ARG60) [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |FKBP13 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d3eaaa_ : (LEU28) (LYS61) [view usage] : b.157.1.0 |Hcp1-like |Hcp1-like |automated matches |automated matches |Edwardsiella tarda [TaxId: 636]
d3zlha2 : (LYS140) (PRO169) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Streptococcus pyogenes [TaxId: 286636]
d1fjge2 : (ASP5) (ASP36) [view usage] : d.50.1.2 |dsRBD-like |dsRNA-binding domain-like |Ribosomal S5 protein, N-terminal domain |Ribosomal S5 protein, N-terminal domain |Thermus thermophilus [TaxId: 274]
d1uv5a_ : (VAL110) (LEU130) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Glycogen synthase kinase-3 beta (Gsk3b) |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.3, c.1, b.82, d.58, b.69, b.29, b.47, i.6, d.144, d.166, b.18, d.3, d.96, b.1, d.21, d.15, d.113, d.26, d.50, f.6,
d.161, d.378, b.172, b.157, b.154