Tableau information
Concept source: d3wa0c1 amino acid (a.a.) range (LEU64)(LEU97)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU64) (LYS69) E1
(VAL72) (ASP78) E2
(VAL92) (LEU97) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 129.2° E2
E3 112.2° -100.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3lida1 : (LEU162) (LEU177) [view usage] : d.110.6.2 |Profilin-like |Sensory domain-like |YkuI C-terminal domain-like |GGDEF family protein VP0354 |Vibrio parahaemolyticus [TaxId: 670]
d1rmla_ : (LEU79) (LEU103) [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
d4hjja_ : (ALA162) (ASN191) [view usage] : b.42.1.2 |beta-Trefoil |Cytokine |Interleukin-1 (IL-1) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2x4mb_ : (PHE245) (GLY298) [view usage] : f.4.4.0 |Transmembrane beta-barrels |OMPT-like |automated matches |automated matches |Yersinia pestis [TaxId: 632]
d3wwgc2 : (HIS231) (LYS250) [view usage] : b.80.1.0 |Single-stranded right-handed beta-helix |Pectin lyase-like |automated matches |automated matches |Aspergillus niger [TaxId: 5061]
d4cqza_ : (GLU14) (GLY39) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza a virus (a/vietnam/1194/2004(h5n1)) [TaxId: 644788]
d1pzha2 : (VAL273) (GLY295) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |Lactate dehydrogenase |Toxoplasma gondii [TaxId: 5811]
d2wzza_ : (TYR226) (SER254) [view usage] : e.3.1.0 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d3zwma_ : (LEU109) (LYS129) [view usage] : c.23.14.3 |Flavodoxin-like |N-(deoxy)ribosyltransferase-like |ADP ribosyl cyclase-like |automated matches |California sea hare (Aplysia californica) [TaxId: 6500]
d2wnrc1 : (ASP164) (PRO186) [view usage] : d.14.1.0 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |automated matches |automated matches |Methanothermobacter thermautotrophicus [TaxId: 145262]
d2mc2a_ : (HIS193) (PRO216) [view usage] : b.42.6.2 |beta-Trefoil |MIR domain |Ryanodine receptor N-terminal-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1h4ra3 : (LEU64) (ALA98) [view usage] : d.15.1.4 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |First domain of FERM |Merlin |Human (Homo sapiens) [TaxId: 9606]
d2bufh_ : (LEU139) (VAL162) [view usage] : c.73.1.2 |Carbamate kinase-like |Carbamate kinase-like |N-acetyl-l-glutamate kinase |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d1ut2h_ : (ILE41) (ASP75) [view usage] : b.2.3.6 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |Dr-family adhesin |DraA/Afimbrial adhesin Afa-III |Escherichia coli [TaxId: 562]
d3hsqa_ : (PHE157) (VAL173) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Leptospira interrogans [TaxId: 173]
d1kcgb_ : (SER165) (GLU183) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |NK cell-activating receptor nkg2d |Human (Homo sapiens) [TaxId: 9606]
d1gc6a3 : (GLY46) (ARG81) [view usage] : d.15.1.4 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |First domain of FERM |Radixin |Mouse (Mus musculus) [TaxId: 10090]
d2p7jb2 : (LEU136) (SER150) [view usage] : d.110.6.2 |Profilin-like |Sensory domain-like |YkuI C-terminal domain-like |GGDEF family protein VP0354 |Vibrio parahaemolyticus [TaxId: 670]
d1xrea2 : (SER130) (LEU162) [view usage] : d.44.1.0 |Fe,Mn superoxide dismutase (SOD), C-terminal domain |Fe,Mn superoxide dismutase (SOD), C-terminal domain |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d2ge5a_ : (ILE129) (TYR163) [view usage] : c.52.1.2 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease EcoRV |Restriction endonuclease EcoRV |Escherichia coli [TaxId: 562]
d3wcsa_ : (THR54) (TYR72) [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |automated matches |French bean (Phaseolus vulgaris) [TaxId: 3885]
d2e51a_ : (THR34) (LEU50) [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]
d1vloa1 : (THR278) (THR301) [view usage] : b.44.2.1 |Elongation factor/aminomethyltransferase common domain |Aminomethyltransferase beta-barrel domain |Aminomethyltransferase beta-barrel domain |Glycine cleavage system T protein, GcvT |Escherichia coli [TaxId: 562]
d3lidb1 : (LEU162) (LEU177) [view usage] : d.110.6.2 |Profilin-like |Sensory domain-like |YkuI C-terminal domain-like |GGDEF family protein VP0354 |Vibrio parahaemolyticus [TaxId: 670]
d1wmxa_ : (GLU83) (TYR109) [view usage] : b.18.1.24 |Galactose-binding domain-like |Galactose-binding domain-like |Family 30 carbohydrate binding module, CBM30 (PKD repeat) |Endoglucanase CelJ |Clostridium thermocellum [TaxId: 1515]
d4jysb_ : (ILE104) (ARG133) [view usage] : d.26.1.0 |FKBP-like |FKBP-like |automated matches |automated matches |Plasmodium vivax [TaxId: 126793]
d1orua_ : (MSE1) (TYR32) [view usage] : b.58.1.2 |PK beta-barrel domain-like |PK beta-barrel domain-like |MOSC (MOCO sulphurase C-terminal) domain |Hypothetical protein YuaD |Bacillus subtilis [TaxId: 1423]
d1r0sa_ : (LEU109) (LYS129) [view usage] : c.23.14.3 |Flavodoxin-like |N-(deoxy)ribosyltransferase-like |ADP ribosyl cyclase-like |ADP ribosyl cyclase |California sea hare (Aplysia californica) [TaxId: 6500]
d2wnra1 : (ASP164) (PRO186) [view usage] : d.14.1.0 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |automated matches |automated matches |Methanothermobacter thermautotrophicus [TaxId: 145262]
d4cqxc_ : (GLU14) (GLY39) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza a virus (a/turkey/turkey/1/2005(h5n1)) [TaxId: 375457]
d1fwyb1 : (ASP306) (ALA322) [view usage] : b.81.1.4 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |GlmU C-terminal domain-like |N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain |Escherichia coli [TaxId: 562]
d2x40a3 : (LEU679) (VAL698) [view usage] : b.1.31.0 |Immunoglobulin-like beta-sandwich |Fibronectin III-like |automated matches |automated matches |Thermotoga neapolitana [TaxId: 309803]
d3a8kc2 : (THR277) (THR300) [view usage] : b.44.2.0 |Elongation factor/aminomethyltransferase common domain |Aminomethyltransferase beta-barrel domain |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2x6aa2 : (GLY268) (HIS296) [view usage] : b.1.18.16 |Immunoglobulin-like beta-sandwich |E set domains |Cytoplasmic domain of inward rectifier potassium channel |automated matches |Magnetospirillum magnetotacticum [TaxId: 188]
d3zwna_ : (LEU109) (LYS129) [view usage] : c.23.14.3 |Flavodoxin-like |N-(deoxy)ribosyltransferase-like |ADP ribosyl cyclase-like |automated matches |California sea hare (Aplysia californica) [TaxId: 6500]
d3i9ka_ : (LEU109) (LYS129) [view usage] : c.23.14.3 |Flavodoxin-like |N-(deoxy)ribosyltransferase-like |ADP ribosyl cyclase-like |automated matches |California sea hare (Aplysia californica) [TaxId: 6500]
d3u7ua2 : (THR240) (GLY261) [view usage] : g.3.9.0 |Knottins (small inhibitors, toxins, lectins) |Growth factor receptor domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3zwpa_ : (LEU109) (LYS129) [view usage] : c.23.14.3 |Flavodoxin-like |N-(deoxy)ribosyltransferase-like |ADP ribosyl cyclase-like |automated matches |California sea hare (Aplysia californica) [TaxId: 6500]
d4nfza_ : (PHE51) (PHE76) [view usage] : c.52.1.34 |Restriction endonuclease-like |Restriction endonuclease-like |PA N-terminal domain |PA N-terminal domain |Influenza A virus [TaxId: 93838]
d1ggpb1 : (LEU112) (GLY139) [view usage] : b.42.2.1 |beta-Trefoil |Ricin B-like lectins |Ricin B-like |Plant cytotoxin B-chain (lectin) |Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]
d3ku3a_ : (GLU24) (GLY49) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
d2gdfb_ : (THR157) (LEU174) [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |automated matches |Dioclea violacea [TaxId: 192415]
d3qqea_ : (GLU24) (GLY49) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
d3ku6a_ : (GLU24) (GLY49) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
d3proc1 : (TRP52) (ASN83) [view usage] : d.52.1.1 |Alpha-lytic protease prodomain-like |Alpha-lytic protease prodomain |Alpha-lytic protease prodomain |Alpha-lytic protease prodomain |Lysobacter enzymogenes [TaxId: 69]
d3ku5a_ : (GLU24) (GLY49) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
d1ilr1_ : (LEU121) (GLU152) [view usage] : b.42.1.2 |beta-Trefoil |Cytokine |Interleukin-1 (IL-1) |Interleukin-1 receptor antagonist protein |Human (Homo sapiens) [TaxId: 9606]
d2aaib1 : (LEU107) (THR134) [view usage] : b.42.2.1 |beta-Trefoil |Ricin B-like lectins |Ricin B-like |Plant cytotoxin B-chain (lectin) |Castor bean (Ricinus communis), Ricin [TaxId: 3988]
d2d3pa_ : (THR157) (LEU173) [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |automated matches |Cratylia argentea [TaxId: 83131]
d3a8ia2 : (THR277) (ASP301) [view usage] : b.44.2.0 |Elongation factor/aminomethyltransferase common domain |Aminomethyltransferase beta-barrel domain |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d4bgza_ : (GLU14) (GLY39) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza virus [TaxId: 375457]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.80, e.3, b.19, b.81, b.29, c.23, f.4, b.18, d.169, d.14, b.2, b.1, d.110, c.73, b.42, c.52, d.162, d.44, d.15, d.26,
d.52, b.44, g.3, b.58