Tableau information
Concept source: d4ec2a_ amino acid (a.a.) range (PRO100)(ASN122)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO100) (HIS106) E1
(GLY107) (ILE113) E2
(GLY117) (ASN122) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 167.6° E2
E3 -23.0° 165.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3elgb_ : (VAL114) (ASP136) [view usage] : d.98.2.1 |BLIP-like |BT0923-like |BT0923-like |Putative periplasmic protein BVU2443 |Bacteroides vulgatus [TaxId: 821]
d1iuba_ : (ILE10) (GLY41) [view usage] : b.68.8.1 |6-bladed beta-propeller |Fucose-specific lectin |Fucose-specific lectin |Fucose-specific lectin |Orange peel mushroom (Aleuria aurantia) [TaxId: 5188]
d2ba0f1 : (PRO28) (GLY58) [view usage] : d.14.1.4 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |Ribonuclease PH domain 1-like |Exosome complex exonuclease 1, ECX1 |Archaeoglobus fulgidus [TaxId: 2234]
d1iaih2 : (LYS123) (ASN163) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
d2kepa_ : (PRO111) (ASP147) [view usage] : d.24.1.0 |Pili subunits |Pili subunits |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d1xi0b_ : (GLU115) (PHE144) [view usage] : b.97.1.2 |Cytolysin/lectin |Cytolysin/lectin |Fungal fruit body lectin |automated matches |Xerocomus chrysenteron [TaxId: 5386]
d3u5co_ : (GLY15) (THR43) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
d2floa3 : (LYS139) (ARG166) [view usage] : c.55.1.8 |Ribonuclease H-like motif |Actin-like ATPase domain |Ppx/GppA phosphatase |Exopolyphosphatase Ppx |Escherichia coli [TaxId: 562]
d3k5la1 : (LEU150) (LEU181) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |automated matches |Escherichia coli [TaxId: 562]
d3m7ne1 : (PRO28) (GLY58) [view usage] : d.14.1.4 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |Ribonuclease PH domain 1-like |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d2o2ab_ : (THR31) (GLY78) [view usage] : d.33.1.2 |SecB-like |SecB-like |SP1558-like |Hypothetical protein gbs1413 |Streptococcus agalactiae [TaxId: 1311]
d2iecd_ : (ASN86) (VAL117) [view usage] : d.316.1.1 |MK0786-like |MK0786-like |MK0786-like |Hypothetical protein MK0786 |Methanopyrus kandleri [TaxId: 2320]
d1p6gk_ : (GLY18) (THR45) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |70S ribosome functional complex |Escherichia coli [TaxId: 562]
d2oqra2 : (GLY129) (VAL147) [view usage] : a.4.6.0 |DNA/RNA-binding 3-helical bundle |C-terminal effector domain of the bipartite response regulators |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d2e5lk1 : (GLY17) (GLY45) [view usage] : c.55.4.1 |Ribonuclease H-like motif |Translational machinery components |Ribosomal protein L18 and S11 |Ribosomal protein S11 |Thermus thermophilus [TaxId: 274]
d2pnza1 : (PRO28) (GLY58) [view usage] : d.14.1.0 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |automated matches |automated matches |Pyrococcus abyssi [TaxId: 29292]
d1zkoa_ : (HIS-2) (ILE24) [view usage] : b.84.1.1 |Barrel-sandwich hybrid |Single hybrid motif |Biotinyl/lipoyl-carrier proteins and domains |Protein H of glycine cleavage system |Thermotoga maritima [TaxId: 2336]
d1smpa1 : (GLY428) (VAL460) [view usage] : b.80.7.1 |Single-stranded right-handed beta-helix |beta-Roll |Serralysin-like metalloprotease, C-terminal domain |Metalloprotease |Serratia marcescens [TaxId: 615]
d2poza1 : (GLY7) (GLU36) [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Mesorhizobium loti [TaxId: 266835]
d4h0oa2 : (LYS193) (MET219) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Entamoeba (Entamoeba histolytica) [TaxId: 5759]
d1i5pa1 : (GLY540) (SER569) [view usage] : b.18.1.3 |Galactose-binding domain-like |Galactose-binding domain-like |delta-Endotoxin, C-terminal domain |delta-Endotoxin, C-terminal domain |Bacillus thuringiensis subsp. kurstaki, CRY2AA [TaxId: 29339]
d3qdsa_ : (ALA111) (SER142) [view usage] : b.97.1.2 |Cytolysin/lectin |Cytolysin/lectin |Fungal fruit body lectin |automated matches |Boletus edulis [TaxId: 36056]
d3hg0a1 : (PRO63) (GLU93) [view usage] : b.21.1.3 |Virus attachment protein globular domain |Virus attachment protein globular domain |Lactophage receptor-binding protein head domain |automated matches |Lactococcus phage [TaxId: 35345]
d1wlwa_ : (MET15) (HIS47) [view usage] : b.29.1.3 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Galectin (animal S-lectin) |automated matches |Conger eel (Conger myriaster) [TaxId: 7943]
d1qpba1 : (ASN305) (PRO322) [view usage] : c.31.1.3 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Pyruvate oxidase and decarboxylase, middle domain |Pyruvate decarboxylase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1af0a1 : (GLU429) (VAL460) [view usage] : b.80.7.1 |Single-stranded right-handed beta-helix |beta-Roll |Serralysin-like metalloprotease, C-terminal domain |Metalloprotease |Serratia marcescens [TaxId: 615]
d1rmfh2 : (SER140) (PHE172) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
d1q25a2 : (ASN131) (LEU148) [view usage] : b.64.1.1 |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |Cation-independent mannose-6-phosphate receptor (MIR-receptor) |Cow (Bos taurus) [TaxId: 9913]
d1toua_ : (ASN39) (PHE64) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Adipocyte lipid-binding protein, ALBP |Human (Homo sapiens) [TaxId: 9606]
d1orma_ : (ALA111) (VAL144) [view usage] : f.4.1.1 |Transmembrane beta-barrels |OMPA-like |Outer membrane protein |Outer membrane protein X (OMPX) |Escherichia coli [TaxId: 562]
d3l9ka_ : (SER64) (ILE92) [view usage] : d.110.7.1 |Profilin-like |Roadblock/LC7 domain |Roadblock/LC7 domain |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1srpa1 : (GLU429) (VAL460) [view usage] : b.80.7.1 |Single-stranded right-handed beta-helix |beta-Roll |Serralysin-like metalloprotease, C-terminal domain |Metalloprotease |Serratia marcescens [TaxId: 615]
d2ch5a2 : (TYR5) (LEU33) [view usage] : c.55.1.5 |Ribonuclease H-like motif |Actin-like ATPase domain |BadF/BadG/BcrA/BcrD-like |N-acetylglucosamine kinase, NAGK |Human (Homo sapiens) [TaxId: 9606]
d1bvza1 : (ALA5) (ASP43) [view usage] : b.1.18.2 |Immunoglobulin-like beta-sandwich |E set domains |E-set domains of sugar-utilizing enzymes |Maltogenic amylase, N-terminal domain N |Thermoactinomyces vulgaris, TVAII [TaxId: 2026]
d4poia_ : (LYS119) (ASP140) [view usage] : d.98.2.0 |BLIP-like |BT0923-like |automated matches |automated matches |Bacteroides caccae [TaxId: 411901]
d2f0ca1 : (PRO63) (ILE90) [view usage] : b.21.1.3 |Virus attachment protein globular domain |Virus attachment protein globular domain |Lactophage receptor-binding protein head domain |Baseplate protein (bpp), C-terminal domain |Lactococcus phage tp901-1 [TaxId: 35345]
d3bbnk1 : (GLY28) (SER55) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, chloroplast (70S ribosome functional complex) |Spinach (Spinacia oleracea) [TaxId: 3562]
d2extb_ : (ASP8) (PHE32) [view usage] : b.82.5.1 |Double-stranded beta-helix |TRAP-like |Trp RNA-binding attenuation protein (TRAP) |Trp RNA-binding attenuation protein (TRAP) |Bacillus stearothermophilus [TaxId: 1422]
d2zkre1 : (ASN15) (ASP37) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Dog (Canis familiaris) [TaxId: 9615]
d1j1ta_ : (GLY146) (PRO172) [view usage] : b.29.1.18 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Alginate lyase |Alginate lyase |Alteromonas sp. [TaxId: 232]
d1g6q4_ : (ASP301) (HIS348) [view usage] : c.66.1.6 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Arginine methyltransferase |Arginine methyltransferase, HMT1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3u5eh_ : (GLY15) (ASN37) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
d2d4wa1 : (VAL5) (GLU33) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Cellulomonas sp. [TaxId: 40001]
d2l67a_ : (ILE35) (THR64) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Liver fatty acid binding protein |Human (Homo sapiens) [TaxId: 9606]
d4mu3a2 : (ARG99) (ASN127) [view usage] : d.14.1.9 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |Imidazole glycerol phosphate dehydratase |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2nn6b1 : (LYS23) (TYR52) [view usage] : d.14.1.4 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |Ribonuclease PH domain 1-like |Exosome complex exonuclease RRP41 |Human (Homo sapiens) [TaxId: 9606]
d2ow8l1 : (GLY17) (SER44) [view usage] : c.55.4.1 |Ribonuclease H-like motif |Translational machinery components |Ribosomal protein L18 and S11 |Ribosomal protein S11 |Thermus thermophilus [TaxId: 274]
d3m4da_ : (GLY223) (ASN269) [view usage] : f.6.1.1 |Leukocidin-like |Leukocidin-like |Leukocidin (pore-forming toxin) |Alpha-hemolysin |Staphylococcus aureus [TaxId: 1280]
d1clqa1 : (ILE108) (ASN153) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of family B DNA polymerases |Bacteriophage RB69 [TaxId: 12353]
d1aora2 : (ALA109) (ILE131) [view usage] : d.152.1.1 |Aldehyde ferredoxin oxidoreductase, N-terminal domain |Aldehyde ferredoxin oxidoreductase, N-terminal domain |Aldehyde ferredoxin oxidoreductase, N-terminal domain |Aldehyde ferredoxin oxidoreductase |Pyrococcus furiosus [TaxId: 2261]
d1u6za3 : (LYS139) (ARG166) [view usage] : c.55.1.8 |Ribonuclease H-like motif |Actin-like ATPase domain |Ppx/GppA phosphatase |Exopolyphosphatase Ppx |Escherichia coli [TaxId: 562]
d3djcc2 : (ASN124) (PRO152) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Legionella pneumophila [TaxId: 272624]
d1a0rb_ : (SER316) (ASN340) [view usage] : b.69.4.1 |7-bladed beta-propeller |WD40 repeat-like |WD40-repeat |beta1-subunit of the signal-transducing G protein heterotrimer |Cow (Bos taurus) [TaxId: 9913]
d3e4dd_ : (ILE4) (PRO36) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
d2jxya_ : (ASP381) (ASP404) [view usage] : b.66.1.0 |4-bladed beta-propeller |Hemopexin-like domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2gska_ : (TYR341) (ILE380) [view usage] : f.4.3.3 |Transmembrane beta-barrels |Porins |Ligand-gated protein channel |Outer membrane cobalamin transporter BtuB |Escherichia coli [TaxId: 562]
d4p1ch_ : (GLY15) (GLN42) [view usage] : b.33.1.1 |ISP domain |ISP domain |Rieske iron-sulfur protein (ISP) |Toluene-4-monooxygenase system protein C, TmoC |Pseudomonas mendocina [TaxId: 300]
d4ixna1 : (ASP46) (ARG69) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Hypothetical protein YjiA, N-terminal domain |Escherichia coli [TaxId: 562]
d3fa7a_ : (LYS38) (PHE65) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Cellular retinoic-acid-binding protein (CRABP) |Human (Homo sapiens), CRABP-II [TaxId: 9606]
d4eeja_ : (THR37) (PHE64) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2wgvb_ : (THR194) (VAL223) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |Class D beta-lactamase |Pseudomonas aeruginosa, OXA-10 [TaxId: 287]
d1noya_ : (VAL106) (ASN150) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of family B DNA polymerases |Bacteriophage T4 [TaxId: 10665]
d1i94k_ : (GLY17) (SER44) [view usage] : c.55.4.1 |Ribonuclease H-like motif |Translational machinery components |Ribosomal protein L18 and S11 |Ribosomal protein S11 |Thermus thermophilus [TaxId: 274]
d1sata1 : (GLU429) (VAL460) [view usage] : b.80.7.1 |Single-stranded right-handed beta-helix |beta-Roll |Serralysin-like metalloprotease, C-terminal domain |Metalloprotease |Serratia marcescens [TaxId: 615]
d3n40f1 : (SER128) (LYS157) [view usage] : f.10.1.1 |Viral glycoprotein, central and dimerisation domains |Viral glycoprotein, central and dimerisation domains |Viral glycoprotein, central and dimerisation domains |automated matches |Chikungunya virus [TaxId: 37124]
d2bjfa_ : (ILE137) (ASP167) [view usage] : d.153.1.0 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |automated matches |automated matches |Clostridium perfringens [TaxId: 1502]
d1lo4h2 : (LYS120) (TRP159) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
d2bhua2 : (LEU535) (GLY562) [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Glycosyltrehalose trehalohydrolase |Deinococcus radiodurans [TaxId: 1299]
d1yhga_ : (GLU90) (ILE128) [view usage] : d.22.1.1 |GFP-like |GFP-like |Fluorescent proteins |automated matches |Jellyfish (Aequorea victoria) [TaxId: 6100]
d3n41f1 : (SER128) (LYS157) [view usage] : f.10.1.1 |Viral glycoprotein, central and dimerisation domains |Viral glycoprotein, central and dimerisation domains |Viral glycoprotein, central and dimerisation domains |automated matches |Chikungunya virus [TaxId: 37124]
d3cr6a_ : (ALA40) (ASN64) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Cellular retinoic-acid-binding protein (CRABP) |Human (Homo sapiens), CRABP-II [TaxId: 9606]
d1umia_ : (ILE205) (THR240) [view usage] : b.18.1.21 |Galactose-binding domain-like |Galactose-binding domain-like |F-box associated region, FBA |F-box only protein 2 |Mouse (Mus musculus) [TaxId: 10090]
d1zkpd_ : (MSE1) (ASP34) [view usage] : d.157.1.9 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |YhfI-like |Hypothetical protein BA1088 (BAS1016) |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d4i9ra_ : (PRO39) (PHE65) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Cellular retinoic-acid-binding protein (CRABP) |Human (Homo sapiens), CRABP-II [TaxId: 9606]
d3mh8a_ : (ALA192) (SER222) [view usage] : b.125.1.0 |LolA-like prokaryotic lipoproteins and lipoprotein localization factors |Prokaryotic lipoproteins and lipoprotein localization factors |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d1qtja_ : (UNK46) (UNK81) [view usage] : i.12.1.1 |Proteins of incorrect, partial and unknown sequence |Proteins of incorrect, partial and unknown sequence |Proteins of incorrect, partial and unknown sequence |Serum amyloid P component, SAP |Horseshoe crab (Limulus polyphemus) [TaxId: 6850]
d1veaa_ : (THR99) (ASN146) [view usage] : d.275.1.1 |Hut operon positive regulatory protein HutP |Hut operon positive regulatory protein HutP |Hut operon positive regulatory protein HutP |Hut operon positive regulatory protein HutP |Bacillus subtilis [TaxId: 1423]
d2bk0a1 : (LYS40) (ILE71) [view usage] : d.129.3.1 |TBP-like |Bet v1-like |Pathogenesis-related protein 10 (PR10)-like |Major allergen api g 1 |Celery (Apium graveolens) [TaxId: 4045]
d1hxta_ : (TYR294) (PHE340) [view usage] : f.4.3.1 |Transmembrane beta-barrels |Porins |Porin |Porin |Escherichia coli, different sequences [TaxId: 562]
d3o2ya_ : (ALA65) (LEU95) [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3sbta_ : (ARG1859) (THR1896) [view usage] : c.55.3.14 |Ribonuclease H-like motif |Ribonuclease H-like |Prp8 beta-finger domain-like |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d2e33a_ : (ILE205) (ALA239) [view usage] : b.18.1.21 |Galactose-binding domain-like |Galactose-binding domain-like |F-box associated region, FBA |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1g6q5_ : (GLY300) (HIS348) [view usage] : c.66.1.6 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Arginine methyltransferase |Arginine methyltransferase, HMT1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3fa9a_ : (LYS38) (PHE65) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Cellular retinoic-acid-binding protein (CRABP) |Human (Homo sapiens), CRABP-II [TaxId: 9606]
d1ts9a_ : (VAL38) (ALA57) [view usage] : b.137.1.1 |Rof/RNase P subunit-like |Rof/RNase P subunit-like |RNase P subunit p29-like |Hypothetical protein AF1917 |Archaeoglobus fulgidus [TaxId: 2234]
d2ofca_ : (SER110) (ILE140) [view usage] : b.97.1.2 |Cytolysin/lectin |Cytolysin/lectin |Fungal fruit body lectin |automated matches |Athelia rolfsii [TaxId: 39291]
d1a12a_ : (VAL122) (GLY144) [view usage] : b.69.5.1 |7-bladed beta-propeller |RCC1/BLIP-II |Regulator of chromosome condensation RCC1 |Regulator of chromosome condensation RCC1 |Human (Homo sapiens) [TaxId: 9606]
d2gtda2 : (GLY124) (PRO150) [view usage] : c.55.1.13 |Ribonuclease H-like motif |Actin-like ATPase domain |CoaX-like |Type III pantothenate kinase, CoaX |Thermotoga maritima [TaxId: 2336]
d1o9yd_ : (GLY50) (THR82) [view usage] : b.139.1.1 |Surface presentation of antigens (SPOA) |Surface presentation of antigens (SPOA) |Surface presentation of antigens (SPOA) |Structural protein HrcQ2, C-terminal domain |Pseudomonas syringae [TaxId: 317]
d1ycfa2 : (ILE142) (ASN166) [view usage] : d.157.1.3 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |ROO N-terminal domain-like |Nitric oxide reductase N-terminal domain |Moorella thermoacetica [TaxId: 1525]
d2huza_ : (ASP83) (VAL119) [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ieca1 : (ASN86) (VAL117) [view usage] : d.316.1.1 |MK0786-like |MK0786-like |MK0786-like |Hypothetical protein MK0786 |Methanopyrus kandleri [TaxId: 2320]
d1mhna_ : (ALA114) (GLU135) [view usage] : b.34.9.1 |SH3-like barrel |Tudor/PWWP/MBT |Tudor domain |Survival motor neuron protein 1, smn |Human (Homo sapiens) [TaxId: 9606]
d1ofza_ : (ILE10) (GLY41) [view usage] : b.68.8.1 |6-bladed beta-propeller |Fucose-specific lectin |Fucose-specific lectin |Fucose-specific lectin |Orange peel mushroom (Aleuria aurantia) [TaxId: 5188]
d1yypa1 : (ASN37) (THR62) [view usage] : d.131.1.2 |DNA clamp |DNA clamp |DNA polymerase processivity factor |UL44 |Human cytomegalovirus, HHV-5 [TaxId: 10359]
d3ia8a_ : (GLU125) (LYS161) [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1mdue2 : (GLY152) (ASP181) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Chicken (Gallus gallus) [TaxId: 9031]
d3c7xa_ : (ASN369) (ASP391) [view usage] : b.66.1.0 |4-bladed beta-propeller |Hemopexin-like domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1lshb_ : (VAL1495) (PRO1526) [view usage] : f.7.1.1 |Lipovitellin-phosvitin complex; beta-sheet shell regions |Lipovitellin-phosvitin complex; beta-sheet shell regions |Lipovitellin-phosvitin complex; beta-sheet shell regions |Lipovitellin-phosvitin complex; beta-sheet shell regions |Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]
d4kood_ : (LYS174) (PRO210) [view usage] : d.18.1.2 |ssDNA-binding transcriptional regulator domain |ssDNA-binding transcriptional regulator domain |Plant transcriptional regulator PBF-2 |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d3aixa2 : (ASP213) (ALA242) [view usage] : d.131.1.0 |DNA clamp |DNA clamp |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
d2fska1 : (GLY170) (GLN203) [view usage] : c.55.1.12 |Ribonuclease H-like motif |Actin-like ATPase domain |Ta0583-like |Hypothetical protein Ta0583 |Thermoplasma acidophilum [TaxId: 2303]
d1zkpc_ : (ALA0) (ASP34) [view usage] : d.157.1.9 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |YhfI-like |Hypothetical protein BA1088 (BAS1016) |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d1dmle1 : (PRO118) (ARG160) [view usage] : d.131.1.2 |DNA clamp |DNA clamp |DNA polymerase processivity factor |UL42 |Human herpesvirus type 1 [TaxId: 10298]
d2qhlc_ : (LEU78) (PHE111) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Ictalurus punctatus [TaxId: 7998]
d3lhca_ : (ARG58) (ASN85) [view usage] : b.89.1.1 |Cyanovirin-N |Cyanovirin-N |Cyanovirin-N |automated matches |Nostoc ellipsosporum [TaxId: 45916]
d1vpka2 : (PHE158) (GLN182) [view usage] : d.131.1.1 |DNA clamp |DNA clamp |DNA polymerase III, beta subunit |DNA polymerase III, beta subunit |Thermotoga maritima [TaxId: 2336]
d2ba1d1 : (PRO28) (PHE57) [view usage] : d.14.1.4 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |Ribonuclease PH domain 1-like |Exosome complex exonuclease 1, ECX1 |Archaeoglobus fulgidus [TaxId: 2234]
d3cxqa_ : (ASP83) (VAL119) [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1exsa_ : (GLU44) (LYS75) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |beta-Lactoglobulin |Pig (Sus scrofa) [TaxId: 9823]
d4gkca_ : (THR37) (PHE64) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1dyka2 : (ASP2982) (ALA3010) [view usage] : b.29.1.4 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Laminin G-like module |Laminin alpha2 chain |Mouse (Mus musculus) [TaxId: 10090]
d1dyka2 : (GLN3020) (SER3046) [view usage] : b.29.1.4 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Laminin G-like module |Laminin alpha2 chain |Mouse (Mus musculus) [TaxId: 10090]
d3fa8a_ : (LYS38) (PHE65) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Cellular retinoic-acid-binding protein (CRABP) |Human (Homo sapiens), CRABP-II [TaxId: 9606]
d1b44d_ : (LEU25) (VAL50) [view usage] : b.40.2.1 |OB-fold |Bacterial enterotoxins |Bacterial AB5 toxins, B-subunits |Heat-labile toxin |Escherichia coli, type IB [TaxId: 562]
d2a0aa1 : (PRO38) (PHE64) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Der f 13 allergen |House dust mite (Dermatophagoides farinae) [TaxId: 6954]
d1t34a_ : (GLY370) (ALA403) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Hormone binding domain of the atrial natriuretic peptide receptor |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2yeza1 : (PHE22) (THR47) [view usage] : d.19.1.0 |MHC antigen-recognition domain |MHC antigen-recognition domain |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d3gbua_ : (MSE210) (PRO233) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 70601]
d2guxa1 : (SER59) (GLY83) [view usage] : b.77.3.1 |beta-Prism I |Mannose-binding lectins |Mannose-binding lectins |Griffithsin |Red alga (Griffithsia) [TaxId: 35158]
d1iq8a1 : (MET7) (GLU32) [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Archaeosine tRNA-guanine transglycosylase, N-terminal domain |Pyrococcus horikoshii [TaxId: 53953]
d2jd5b_ : (GLY165) (ARG190) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3d61a_ : (ALA273) (PRO302) [view usage] : b.67.2.1 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |alpha-L-arabinanase-like |automated matches |Geobacillus stearothermophilus [TaxId: 1422]
d1f1sa3 : (LEU956) (ASP980) [view usage] : b.24.1.1 |Hyaluronate lyase-like, C-terminal domain |Hyaluronate lyase-like, C-terminal domain |Hyaluronate lyase-like, C-terminal domain |Hyaluronate lyase |Streptococcus agalactiae [TaxId: 1311]
d4l63f_ : (ALA25) (VAL50) [view usage] : b.40.2.1 |OB-fold |Bacterial enterotoxins |Bacterial AB5 toxins, B-subunits |automated matches |Escherichia coli [TaxId: 562]
d1x9ja1 : (ARG3) (HIS32) [view usage] : c.55.1.2 |Ribonuclease H-like motif |Actin-like ATPase domain |Acetokinase-like |butyrate kinase 2 |Thermotoga maritima [TaxId: 2336]
d1nlzb_ : (PRO102) (ARG133) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Hexameric traffic ATPase, HP0525 |Helicobacter pylori [TaxId: 210]
d1y2ta_ : (THR112) (ILE142) [view usage] : b.97.1.2 |Cytolysin/lectin |Cytolysin/lectin |Fungal fruit body lectin |TF antigen-binding lectin |Common mushroom (Agaricus bisporus) [TaxId: 5341]
d1s1hk_ : (GLY14) (VAL41) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4iaua_ : (THR3) (THR27) [view usage] : b.11.1.0 |gamma-Crystallin-like |gamma-Crystallin-like |automated matches |automated matches |Geodia cydonium [TaxId: 6047]
d1ei5a2 : (GLY428) (PHE452) [view usage] : b.61.3.1 |Streptavidin-like |D-aminopeptidase, middle and C-terminal domains |D-aminopeptidase, middle and C-terminal domains |D-aminopeptidase, middle and C-terminal domains |Ochrobactrum anthropi [TaxId: 529]
d3khya2 : (ILE197) (MSE220) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Francisella tularensis [TaxId: 119856]
d4arha_ : (GLU83) (LYS104) [view usage] : b.60.1.4 |Lipocalins |Lipocalins |Hypothetical protein YodA |automated matches |Salmonella enterica [TaxId: 440534]
d3djca2 : (ASN124) (PRO152) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Legionella pneumophila [TaxId: 272624]
d2blma_ : (TRP229) (ARG267) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Bacillus licheniformis [TaxId: 1402]
d2jdua_ : (ALA79) (ASN110) [view usage] : b.115.1.1 |Calcium-mediated lectin |Calcium-mediated lectin |Calcium-mediated lectin |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d1fdqa_ : (PRO38) (PHE64) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Brain fatty acid binding protein |Human (Homo sapiens) [TaxId: 9606]
d1tzla2 : (GLU432) (ARG476) [view usage] : d.16.1.1 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |GMC oxidoreductases |Pyranose 2-oxidase |White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
d2e89d2 : (GLY294) (PHE313) [view usage] : d.229.1.1 |MesJ substrate recognition domain-like |MesJ substrate recognition domain-like |MesJ substrate recognition domain-like |TilS-like protein Aq_1887 |Aquifex aeolicus [TaxId: 63363]
d4qoaa_ : (LYS62) (CYS86) [view usage] : d.98.2.0 |BLIP-like |BT0923-like |automated matches |automated matches |Bacteroides uniformis [TaxId: 411479]
d1fjgk_ : (GLY17) (SER44) [view usage] : c.55.4.1 |Ribonuclease H-like motif |Translational machinery components |Ribosomal protein L18 and S11 |Ribosomal protein S11 |Thermus thermophilus [TaxId: 274]
d1nlze_ : (PRO102) (ARG133) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Hexameric traffic ATPase, HP0525 |Helicobacter pylori [TaxId: 210]
d2ba0d1 : (PRO28) (PHE57) [view usage] : d.14.1.4 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |Ribonuclease PH domain 1-like |Exosome complex exonuclease 1, ECX1 |Archaeoglobus fulgidus [TaxId: 2234]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.80, e.3, c.1, b.82, c.69, b.69, i.1, b.29, b.67, d.157, c.66, c.93, d.129, c.72, f.4, d.144, b.40, c.37, c.55,
d.153, b.60, b.18, d.14, c.31, b.1, d.108, d.110, b.125, d.98, b.84, d.19, b.21, b.77, d.131, b.34, a.4, i.12, b.11, b.61,
b.97, d.16, b.115, d.54, b.71, d.82, d.33, b.24, b.33, d.24, b.66, f.7, f.6, d.18, b.64, f.10, d.22, b.137, b.89, d.229,
d.275, d.152, b.139, d.316