Tableau information
Concept source: d4mida_ amino acid (a.a.) range (THR82)(CYS113)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR82) (SER88) E1
(LYS101) (ASN105) E2
(GLU109) (CYS113) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 166.9° E2
E3 -153.3° 26.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2a7ya1 : (MET1) (SER30) [view usage] : b.34.6.3 |SH3-like barrel |Cell growth inhibitor/plasmid maintenance toxic component |Rv2302-like |Hypothetical protein Rv2302/MT2359 |Mycobacterium tuberculosis [TaxId: 1773]
d4ouma_ : (MET996) (GLY1027) [view usage] : b.22.1.0 |TNF-like |TNF-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3oedc1 : (LYS41) (TYR64) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ly2a1 : (LYS41) (TYR64) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Complement receptor 2, cr2 |Human (Homo sapiens) [TaxId: 9606]
d2psmf_ : (THR42) (ARG66) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Interleukin-15 receptor subunit alpha |Mouse (Mus musculus) [TaxId: 10090]
d1utea_ : (GLN226) (GLU267) [view usage] : d.159.1.1 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Purple acid phosphatase-like |Mammalian purple acid phosphatase |Pig (Sus scrofa) [TaxId: 9823]
d1kbaa_ : (ASP19) (THR60) [view usage] : g.7.1.1 |Snake toxin-like |Snake toxin-like |Snake venom toxins |Bungarotoxin |Many-banded krait (Bungarus multicinctus), kappa-bungarotoxin [TaxId: 8616]
d1wara_ : (GLN224) (GLU265) [view usage] : d.159.1.1 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Purple acid phosphatase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2v5eb_ : (ILE105) (CYS133) [view usage] : g.17.1.2 |Cystine-knot cytokines |Cystine-knot cytokines |Transforming growth factor (TGF)-beta |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ghqb1 : (LYS42) (TYR65) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Complement receptor 2, cr2 |Human (Homo sapiens) [TaxId: 9606]
d4cava2 : (THR368) (THR399) [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Aspergillus fumigatus [TaxId: 746128]
d1ckla2 : (GLU103) (LYS125) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |CD46 (membrane cofactor protein, MCP) |Human (Homo sapiens) [TaxId: 9606]
d1kenh1 : (SER93) (SER119) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 7.1 [TaxId: 10090]
d1h03p2 : (HIS107) (GLY129) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Complement decay-accelerating factor (Daf, CD55) |Human (Homo sapiens) [TaxId: 9606]
d1hcnb_ : (ARG60) (CYS90) [view usage] : g.17.1.4 |Cystine-knot cytokines |Cystine-knot cytokines |Gonadodropin/Follitropin |Gonadotropin B chain |Human (Homo sapiens) [TaxId: 9606]
d2bq8x_ : (GLN224) (GLY263) [view usage] : d.159.1.1 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Purple acid phosphatase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2psmc1 : (THR42) (ARG66) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Interleukin-15 receptor subunit alpha |Mouse (Mus musculus) [TaxId: 10090]
d3fubd_ : (ILE105) (CYS133) [view usage] : g.17.1.2 |Cystine-knot cytokines |Cystine-knot cytokines |Transforming growth factor (TGF)-beta |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1p85s_ : (GLU9) (GLU87) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |70S ribosome functional complex |Escherichia coli [TaxId: 562]
d1qhwa_ : (GLN247) (GLU288) [view usage] : d.159.1.1 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Purple acid phosphatase-like |Mammalian purple acid phosphatase |Norway rat (Rattus norvegicus) [TaxId: 10116]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.159, i.1, b.1, d.108, b.22, b.34, g.17, g.18, g.7