Tableau information
Concept source: d1fwxb2 amino acid (a.a.) range (GLY15)(GLY36)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY15) (TYR20) E1
(TYR20) (SER26) E2
(GLU31) (GLY36) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 65.5° E2
E3 118.1° 156.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1uw6a_ : (LYS94) (ARG120) [view usage] : b.96.1.1 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |Acetylcholine binding protein (ACHBP) |Great pond snail (Lymnaea stagnalis) [TaxId: 6523]
d4c0sa2 : (PRO245) (GLY265) [view usage] : b.43.3.0 |Reductase/isomerase/elongation factor common domain |Translation proteins |automated matches |automated matches |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1cf2o2 : (GLU277) (HIS299) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |Methanothermus fervidus [TaxId: 2180]
d1x4ya1 : (GLY11) (PRO33) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Brother of CDO precursor (BOC) |Mouse (Mus musculus) [TaxId: 10090]
d1h3na2 : (LYS302) (THR324) [view usage] : b.51.1.1 |ValRS/IleRS/LeuRS editing domain |ValRS/IleRS/LeuRS editing domain |ValRS/IleRS/LeuRS editing domain |Leucyl-tRNA synthetase (LeuRS) |Thermus thermophilus [TaxId: 274]
d2x5wa_ : (ASP400) (ASP424) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d1fr8a_ : (LEU378) (SER402) [view usage] : c.68.1.2 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |beta 1,4 galactosyltransferase (b4GalT1) |beta 1,4 galactosyltransferase (b4GalT1) |Cow (Bos taurus) [TaxId: 9913]
d3om5a_ : (THR418) (GLY444) [view usage] : b.67.2.2 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |Levansucrase |Levansucrase |Bacillus megaterium [TaxId: 1404]
d2zjub_ : (LYS94) (SER116) [view usage] : b.96.1.1 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |Great pond snail (Lymnaea stagnalis) [TaxId: 6523]
d1gzeb_ : (SER221) (ALA241) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Exoenzyme c3 |Clostridium botulinum [TaxId: 1491]
d3u8ka_ : (LYS94) (SER116) [view usage] : b.96.1.1 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |Great pond snail (Lymnaea stagnalis) [TaxId: 6523]
d1as7a2 : (GLY258) (PHE292) [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Nitrite reductase, NIR |Alcaligenes faecalis, strain s-6 [TaxId: 511]
d1zcwa_ : (ASP158) (SER177) [view usage] : d.313.1.1 |Antiparallel beta/alpha barrel (PT-barrel) |Prenyltransferase-like |Prenyltransferase-like |Aromatic prenyltransferase |Streptomyces sp. CL190 [TaxId: 93372]
d2wkwa_ : (GLY19) (ASP48) [view usage] : c.69.1.15 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |A novel bacterial esterase |automated matches |Alcaligenes sp. [TaxId: 512]
d4na7a_ : (THR80) (LEU108) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1lvoa_ : (VAL72) (VAL90) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |Transmissible gastroenteritis virus [TaxId: 11149]
d3om7a_ : (THR418) (ARG443) [view usage] : b.67.2.2 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |Levansucrase |Levansucrase |Bacillus megaterium [TaxId: 1404]
d1biha2 : (TYR99) (VAL123) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Hemolin |Moth (Hyalophora cecropia) [TaxId: 7123]
d1fgxa_ : (LEU378) (SER402) [view usage] : c.68.1.2 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |beta 1,4 galactosyltransferase (b4GalT1) |beta 1,4 galactosyltransferase (b4GalT1) |Cow (Bos taurus) [TaxId: 9913]
d3om4a_ : (THR418) (ARG443) [view usage] : b.67.2.2 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |Levansucrase |Levansucrase |Bacillus megaterium [TaxId: 1404]
d1irya_ : (ASP62) (ASP89) [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |7,8-dihydro-8-oxoguanine triphosphatase Hmth1 |Human (Homo sapiens) [TaxId: 9606]
d4l41c_ : (LEU374) (SER398) [view usage] : c.68.1.2 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |beta 1,4 galactosyltransferase (b4GalT1) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1f60a1 : (PRO243) (GLY263) [view usage] : b.43.3.1 |Reductase/isomerase/elongation factor common domain |Translation proteins |Elongation factors |Elongation factor eEF-1alpha, domain 2 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2jxya_ : (ASN285) (ASP303) [view usage] : b.66.1.0 |4-bladed beta-propeller |Hemopexin-like domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2yvjb_ : (CYS83) (SER103) [view usage] : b.33.1.1 |ISP domain |ISP domain |Rieske iron-sulfur protein (ISP) |automated matches |Pseudomonas sp. [TaxId: 306]
d2rbca_ : (LYS8) (ALA47) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
d2e7ba_ : (PRO8) (VAL31) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1pzta_ : (LEU378) (GLY399) [view usage] : c.68.1.2 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |beta 1,4 galactosyltransferase (b4GalT1) |beta 1,4 galactosyltransferase (b4GalT1) |Cow (Bos taurus) [TaxId: 9913]
d2j3zd1 : (GLY190) (GLN217) [view usage] : d.166.1.0 |ADP-ribosylation |ADP-ribosylation |automated matches |automated matches |Clostridium botulinum [TaxId: 1491]
d2plfa1 : (LYS212) (GLN244) [view usage] : b.43.3.1 |Reductase/isomerase/elongation factor common domain |Translation proteins |Elongation factors |Initiation factor eIF2 gamma subunit, domain II |Sulfolobus solfataricus [TaxId: 2287]
d3data_ : (ASN134) (GLN161) [view usage] : c.71.1.0 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |automated matches |automated matches |Bacillus anthracis [TaxId: 260799]
d1neea1 : (LYS23) (ASN43) [view usage] : d.241.1.1 |Ribosome binding domain-like |Translation initiation factor 2 beta, aIF2beta, N-terminal domain |Translation initiation factor 2 beta, aIF2beta, N-terminal domain |Translation initiation factor 2 beta, aIF2beta, N-terminal domain |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1hh2p1 : (VAL178) (ARG198) [view usage] : b.40.4.5 |OB-fold |Nucleic acid-binding proteins |Cold shock DNA-binding domain-like |S1 domain of NusA |Thermotoga maritima [TaxId: 2336]
d3umac_ : (ILE123) (GLU143) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]
d4juqa_ : (LYS228) (THR248) [view usage] : d.127.1.1 |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Creatinase/aminopeptidase |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d3n2ta_ : (HIS80) (ARG101) [view usage] : c.1.7.0 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |automated matches |automated matches |Gluconobacter oxydans [TaxId: 442]
d1hh4e_ : (ILE439) (LEU459) [view usage] : b.1.18.8 |Immunoglobulin-like beta-sandwich |E set domains |RhoGDI-like |Rho GDP-dissociation inhibitor 1, RhoGDI |Human (Homo sapiens) [TaxId: 9606]
d2czca1 : (GLU275) (HIS297) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |Pyrococcus horikoshii [TaxId: 53953]
d2f5kb_ : (GLU27) (SER47) [view usage] : b.34.13.3 |SH3-like barrel |Chromo domain-like |Chromo barrel domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1pt8a_ : (PRO240) (ILE272) [view usage] : c.123.1.1 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |Hypothetical protein YfdW |Escherichia coli [TaxId: 562]
d1q47b_ : (ASP223) (PHE246) [view usage] : b.69.12.1 |7-bladed beta-propeller |Sema domain |Sema domain |Semaphorin 3a |Mouse (Mus musculus) [TaxId: 10090]
d1uv6a_ : (LYS94) (ARG120) [view usage] : b.96.1.1 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |Acetylcholine binding protein (ACHBP) |Great pond snail (Lymnaea stagnalis) [TaxId: 6523]
d1p31a3 : (TYR257) (CYS275) [view usage] : c.72.2.1 |Ribokinase-like |MurD-like peptide ligases, catalytic domain |MurCDEF |UDP-N-acetylmuramate-alanine ligase MurC |Haemophilus influenzae [TaxId: 727]
d3u8jb_ : (LYS94) (SER116) [view usage] : b.96.1.1 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |Great pond snail (Lymnaea stagnalis) [TaxId: 6523]
d1yhja_ : (VAL111) (VAL128) [view usage] : c.72.1.5 |Ribokinase-like |Ribokinase-like |PfkB-like kinase |Pyridoxal kinase |Sheep (Ovis aries) [TaxId: 9940]
d1o0ra_ : (LEU378) (GLY399) [view usage] : c.68.1.2 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |beta 1,4 galactosyltransferase (b4GalT1) |beta 1,4 galactosyltransferase (b4GalT1) |Cow (Bos taurus) [TaxId: 9913]
d1to3a_ : (ALA85) (LEU106) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Putative aldolase YihT |Salmonella typhimurium [TaxId: 90371]
d1gqyb3 : (TYR257) (CYS275) [view usage] : c.72.2.1 |Ribokinase-like |MurD-like peptide ligases, catalytic domain |MurCDEF |UDP-N-acetylmuramate-alanine ligase MurC |Haemophilus influenzae [TaxId: 727]
d1l2fa1 : (VAL178) (ARG198) [view usage] : b.40.4.5 |OB-fold |Nucleic acid-binding proteins |Cold shock DNA-binding domain-like |S1 domain of NusA |Thermotoga maritima [TaxId: 2336]
d1ux2a_ : (LYS94) (SER116) [view usage] : b.96.1.1 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |Acetylcholine binding protein (ACHBP) |Great pond snail (Lymnaea stagnalis) [TaxId: 6523]
d4fo8b_ : (LYS228) (THR248) [view usage] : d.127.1.1 |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Creatinase/aminopeptidase |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d1xeua2 : (LYS217) (THR232) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Listeria monocytogenes [TaxId: 1639]
d2o5ka1 : (ILE109) (VAL131) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Glycogen synthase kinase-3 beta (Gsk3b) |Human (Homo sapiens) [TaxId: 9606]
d2zjvc_ : (LYS94) (ARG120) [view usage] : b.96.1.1 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |Great pond snail (Lymnaea stagnalis) [TaxId: 6523]
d1ugka_ : (SER103) (SER133) [view usage] : b.7.1.2 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |Synaptotagmin-like (S variant) |Synaptotagmin IV |Human (Homo sapiens) [TaxId: 9606]
d2kgka_ : (ASN134) (GLN161) [view usage] : c.71.1.0 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d2b5la1 : (LEU162) (PRO185) [view usage] : b.69.4.3 |7-bladed beta-propeller |WD40 repeat-like |DDB1-like |DDB1 |Human (Homo sapiens) [TaxId: 9606]
d2d9ra1 : (SER20) (VAL39) [view usage] : b.129.2.1 |Double-split beta-barrel |AF2212/PG0164-like |PG0164-like |Hypothetical protein PG0164 |Porphyromonas gingivalis [TaxId: 837]
d1s0ua1 : (THR235) (ALA264) [view usage] : b.43.3.1 |Reductase/isomerase/elongation factor common domain |Translation proteins |Elongation factors |Initiation factor eIF2 gamma subunit, domain II |Methanococcus jannaschii [TaxId: 2190]
d1qn0a_ : (GLY7) (HIS26) [view usage] : a.138.1.1 |Multiheme cytochromes |Multiheme cytochromes |Cytochrome c3-like |Cytochrome c3 |Desulfovibrio gigas [TaxId: 879]
d1pexa_ : (ASP424) (GLY441) [view usage] : b.66.1.1 |4-bladed beta-propeller |Hemopexin-like domain |Hemopexin-like domain |Collagenase-3 (MMP-13), C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.123, c.69, a.104, b.69, c.68, b.67, b.47, c.72, d.144, b.40, c.47, d.166, d.81, d.127, b.6, c.71, b.1, b.96, b.129,
b.34, a.138, b.7, b.43, b.51, d.113, b.33, b.66, d.313, d.241