Tableau information
Concept source: d2a37a_ amino acid (a.a.) range (MET1)(ARG20)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(MET1) (HIS7) E1
(HIS7) (ALA11) E2
(ASP15) (ARG20) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 99.3° E2
E3 -66.7° -154.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2f2wa_ : (GLU7) (LYS26) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |alpha-Spectrin, SH3 domain |Chicken (Gallus gallus) [TaxId: 9031]
d3m0ra_ : (GLU7) (LYS26) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |alpha-Spectrin, SH3 domain |Chicken (Gallus gallus) [TaxId: 9031]
d1znpc_ : (HIS54) (ASP80) [view usage] : b.82.1.16 |Double-stranded beta-helix |RmlC-like cupins |YML079-like |Hypothetical protein Atu3615 |Agrobacterium tumefaciens [TaxId: 358]
d2mnga_ : (LYS610) (ILE635) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1k76a_ : (GLU3) (LYS24) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains |Caenorhabditis elegans, SEM-5 [TaxId: 6239]
d1yn8a_ : (ARG3) (ALA21) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2dlma_ : (LYS8) (GLN27) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1uuea_ : (GLU7) (LYS26) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |alpha-Spectrin, SH3 domain |Chicken (Gallus gallus) [TaxId: 9031]
d3i6tb1 : (ALA9) (GLY33) [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Jannaschia sp. [TaxId: 290400]
d1hwwa2 : (LEU1020) (SER1044) [view usage] : b.30.5.6 |Supersandwich |Galactose mutarotase-like |alpha-mannosidase, C-terminal domain |Golgi alpha-mannosidase II |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1gbra_ : (MET1) (LYS20) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains |Mouse (Mus musculus) [TaxId: 10090]
d4izga1 : (GLU5) (TRP28) [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Paracoccus denitrificans [TaxId: 318586]
d2hewf1 : (ILE60) (ASN91) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Tumor necrosis factor ligand superfamily member 4, OX40L |Mouse (Mus musculus) [TaxId: 10090]
d3muy13 : (ASP497) (SER519) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2we3a2 : (VAL132) (VAL156) [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |automated matches |Human herpesvirus 4 [TaxId: 10377]
d1fa2a_ : (ILE87) (ILE108) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |beta-Amylase |Sweet potato (Ipomoea batatas) [TaxId: 4120]
d1pwta_ : (GLU6) (LYS25) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |alpha-Spectrin, SH3 domain |Chicken (Gallus gallus) [TaxId: 9031]
d1nhca_ : (ASN280) (GLY319) [view usage] : b.80.1.3 |Single-stranded right-handed beta-helix |Pectin lyase-like |Galacturonase |Polygalacturonase |Fungus (Aspergillus niger), endo-polygalacturonase I [TaxId: 5061]
d4jvaa1 : (PHE169) (ILE192) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |Regulatory subunit of Protein kinase A |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2f1aa2 : (LEU1020) (SER1044) [view usage] : b.30.5.6 |Supersandwich |Galactose mutarotase-like |alpha-mannosidase, C-terminal domain |Golgi alpha-mannosidase II |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d2lj1a_ : (PHE7) (ASP27) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2j05a_ : (ARG282) (LEU302) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3nv0b_ : (GLY101) (TYR135) [view usage] : d.17.4.0 |Cystatin-like |NTF2-like |automated matches |automated matches |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d1htya2 : (LEU1020) (SER1044) [view usage] : b.30.5.6 |Supersandwich |Galactose mutarotase-like |alpha-mannosidase, C-terminal domain |Golgi alpha-mannosidase II |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1rl3b2 : (PRO671) (ILE693) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |Regulatory subunit of Protein kinase A |Cow (Bos taurus) [TaxId: 9913]
d1ripa_ : (LYS7) (HIS51) [view usage] : b.40.4.5 |OB-fold |Nucleic acid-binding proteins |Cold shock DNA-binding domain-like |Ribosomal protein S17 |Bacillus stearothermophilus [TaxId: 1422]
d1nm7a_ : (PHE310) (LYS330) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Peroxisomal membrane protein Pex13p |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1ljmb_ : (GLU2061) (GLY2095) [view usage] : b.2.5.6 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |RUNT domain |Acute myeloid leukemia 1 protein (AML1), RUNT domain |Human (Homo sapiens) [TaxId: 9606]
d1ycsb2 : (VAL462) (GLU481) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |53BP2 |Human (Homo sapiens) [TaxId: 9606]
d2gp4a1 : (PRO520) (LEU555) [view usage] : c.8.2.2 |The "swivelling" beta/beta/alpha domain |LeuD/IlvD-like |IlvD/EDD C-terminal domain-like |6-phosphogluconate dehydratase EDD |Shewanella oneidensis [TaxId: 70863]
d3ek6b_ : (LYS98) (ILE115) [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Xanthomonas campestris pv. campestris [TaxId: 340]
d1ljma_ : (GLU1061) (GLY1095) [view usage] : b.2.5.6 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |RUNT domain |Acute myeloid leukemia 1 protein (AML1), RUNT domain |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.80, c.1, b.82, b.30, b.40, b.2, b.85, c.73, c.8, d.17, b.22, b.34, d.54