Tableau information
Concept source: d3bzfb_ amino acid (a.a.) range (GLU69)(ARG97)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU69) (GLU74) E1
(LYS75) (HIS84) E2
(LYS91) (ARG97) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -126.5° E2
E3 -74.0° 147.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2evra1 : (GLY15) (SER40) [view usage] : b.34.11.3 |SH3-like barrel |Prokaryotic SH3-related domain |Spr N-terminal domain-like |Cell wall-associated hydrolase Spr N-terminal domain |Nostoc punctiforme [TaxId: 272131]
d3dema1 : (MET44) (GLY73) [view usage] : b.23.1.0 |CUB-like |Spermadhesin, CUB domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1osya_ : (GLY82) (LYS112) [view usage] : b.1.21.1 |Immunoglobulin-like beta-sandwich |Fungal immunomodulatory protein, FIP |Fungal immunomodulatory protein, FIP |Fungal immunomodulatory protein, FIP |Golden needle mushroom (Flammulina velutipes) [TaxId: 38945]
d1uf3c_ : (MSE94) (VAL113) [view usage] : d.159.1.6 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |TT1561-like |Hypothetical protein TT1561 |Thermus thermophilus [TaxId: 274]
d1c04d_ : (VAL63) (PHE79) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Prokaryotic (50S subunit) |Haloarcula marismortui [TaxId: 2238]
d3dkua_ : (PHE2) (GLN33) [view usage] : d.113.1.0 |Nudix |Nudix |automated matches |automated matches |Escherichia coli [TaxId: 405955]
d1kska3 : (PHE39) (HIS58) [view usage] : d.66.1.5 |Alpha-L RNA-binding motif |Alpha-L RNA-binding motif |Pseudouridine synthase RsuA N-terminal domain |Pseudouridine synthase RsuA N-terminal domain |Escherichia coli [TaxId: 562]
d2btia_ : (LEU4) (VAL22) [view usage] : b.151.1.1 |CsrA-like |CsrA-like |CsrA-like |automated matches |Yersinia enterocolitica [TaxId: 630]
d1n3oa_ : (ALA54) (PRO94) [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]
d2v37a_ : (ARG63) (VAL97) [view usage] : b.1.6.0 |Immunoglobulin-like beta-sandwich |Cadherin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1msaa_ : (ASN2) (MET56) [view usage] : b.78.1.1 |beta-Prism II |alpha-D-mannose-specific plant lectins |alpha-D-mannose-specific plant lectins |Lectin (agglutinin) |Snowdrop (Galanthus nivalis) [TaxId: 4670]
d3ekca_ : (GLU69) (ARG97) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |beta2-microglobulin |Human (Homo sapiens) [TaxId: 9606]
d1fxia_ : (GLY72) (HIS90) [view usage] : d.15.4.1 |beta-Grasp (ubiquitin-like) |2Fe-2S ferredoxin-like |2Fe-2S ferredoxin-related |2Fe-2S ferredoxin |Aphanothece sacrum [TaxId: 1122]
d2btib_ : (LEU4) (VAL22) [view usage] : b.151.1.1 |CsrA-like |CsrA-like |CsrA-like |automated matches |Yersinia enterocolitica [TaxId: 630]
d1uloa_ : (ALA110) (ASP147) [view usage] : b.18.1.14 |Galactose-binding domain-like |Galactose-binding domain-like |CBM4/9 |Cellulose-binding domain of cellulase C |Cellulomonas fimi [TaxId: 1708]
d1e5ga2 : (ASP87) (SER114) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Complement control protein |Vaccinia virus [TaxId: 10245]
d1r46b1 : (GLY395) (THR420) [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Melibiase |Human (Homo sapiens) [TaxId: 9606]
d1bmga_ : (GLU68) (ARG96) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |beta2-microglobulin |Cow (Bos taurus) [TaxId: 9913]
d2vzoa2 : (PRO298) (ARG335) [view usage] : b.1.4.0 |Immunoglobulin-like beta-sandwich |beta-Galactosidase/glucuronidase domain |automated matches |automated matches |Amycolatopsis orientalis [TaxId: 31958]
d1o5la1 : (VAL31) (PRO58) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |CRP-like transcriptional regulator TM1171, N-terminal domain |Thermotoga maritima [TaxId: 2336]
d2d04a_ : (SER2) (LEU56) [view usage] : b.78.1.0 |beta-Prism II |alpha-D-mannose-specific plant lectins |automated matches |automated matches |Curculigo latifolia [TaxId: 4676]
d1qdlb_ : (ARG102) (TYR135) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |Anthranilate synthase GAT subunit, TrpG |Sulfolobus solfataricus [TaxId: 2287]
d2q9ua1 : (THR126) (PHE145) [view usage] : d.157.1.3 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |ROO N-terminal domain-like |Nitric oxide reductase N-terminal domain |Giardia intestinalis [TaxId: 5741]
d2hbwa1 : (GLY15) (VAL40) [view usage] : b.34.11.0 |SH3-like barrel |Prokaryotic SH3-related domain |automated matches |automated matches |Anabaena variabilis [TaxId: 240292]
d1osyb_ : (GLY82) (LYS112) [view usage] : b.1.21.1 |Immunoglobulin-like beta-sandwich |Fungal immunomodulatory protein, FIP |Fungal immunomodulatory protein, FIP |Fungal immunomodulatory protein, FIP |Golden needle mushroom (Flammulina velutipes) [TaxId: 38945]
d3zuni_ : (LEU63) (LEU89) [view usage] : b.3.3.1 |Prealbumin-like |VHL |VHL |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2rfwa_ : (GLN118) (ALA148) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Fungus (Melanocarpus albomyces) [TaxId: 204285]
d2xt9b_ : (ASP126) (THR147) [view usage] : b.26.1.0 |SMAD/FHA domain |SMAD/FHA domain |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d2qzfa1 : (THR1021) (LYS1051) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Complement decay-accelerating factor (Daf, CD55) |Human (Homo sapiens) [TaxId: 9606]
d2xkua_ : (GLU69) (TRP95) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1vpzb_ : (LEU4) (VAL22) [view usage] : b.151.1.1 |CsrA-like |CsrA-like |CsrA-like |Carbon storage regulator homolog, CsrA |Pseudomonas aeruginosa [TaxId: 287]
d1r46a1 : (GLY395) (MET421) [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Melibiase |Human (Homo sapiens) [TaxId: 9606]
d2p97a1 : (ASP96) (GLY116) [view usage] : d.157.1.12 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Ava3068-like |Hypothetical protein Ava3068 |Anabaena variabilis [TaxId: 1172]
d3qq3b_ : (GLU70) (ARG98) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |beta2-microglobulin |Pig (Sus scrofa) [TaxId: 9823]
d3zrci_ : (LEU63) (LEU89) [view usage] : b.3.3.1 |Prealbumin-like |VHL |VHL |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3kt9a_ : (GLN77) (GLU102) [view usage] : b.26.1.0 |SMAD/FHA domain |SMAD/FHA domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1a4sa_ : (SER458) (ASN478) [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Baltic cod (Gadus callarias) [TaxId: 8053]
d1wdta1 : (GLY308) (HIS327) [view usage] : b.43.3.1 |Reductase/isomerase/elongation factor common domain |Translation proteins |Elongation factors |Elongation factor G (EF-G), domain II |Thermus thermophilus, EF-G-2 [TaxId: 274]
d3qdaa_ : (GLU69) (ASP96) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |beta2-microglobulin |Human (Homo sapiens) [TaxId: 9606]
d2gndb_ : (ALA54) (PRO94) [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |automated matches |Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]
d3hjea2 : (GLU687) (LYS704) [view usage] : b.71.1.0 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
d2ks4a_ : (GLU62) (SER94) [view usage] : b.97.1.1 |Cytolysin/lectin |Cytolysin/lectin |Anemone pore-forming cytolysin |automated matches |Sea anemone (Stichodactyla helianthus) [TaxId: 6123]
d1ycfa2 : (ASN122) (PHE141) [view usage] : d.157.1.3 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |ROO N-terminal domain-like |Nitric oxide reductase N-terminal domain |Moorella thermoacetica [TaxId: 1525]
d1f3ja1 : (THR152) (PRO180) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Class II MHC alpha chain, C-terminal domain |Mouse (Mus musculus), I-A group [TaxId: 10090]
d2cela_ : (GLN118) (SER148) [view usage] : b.29.1.10 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolase family 7 catalytic core |Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) |Trichoderma reesei, Cel7A [TaxId: 51453]
d3ltqa_ : (PRO2) (LEU29) [view usage] : b.42.1.2 |beta-Trefoil |Cytokine |Interleukin-1 (IL-1) |Interleukin-1beta |Human (Homo sapiens) [TaxId: 9606]
d2mh7a_ : (GLY70) (HIS88) [view usage] : d.15.4.0 |beta-Grasp (ubiquitin-like) |2Fe-2S ferredoxin-like |automated matches |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
d1yjmc_ : (LEU83) (LEU104) [view usage] : b.26.1.2 |SMAD/FHA domain |SMAD/FHA domain |FHA domain |Polynucleotide kinase 3'-phosphatase |Mouse (Mus musculus) [TaxId: 10090]
d2cboa_ : (GLY84) (PHE112) [view usage] : b.1.7.1 |Immunoglobulin-like beta-sandwich |Actinoxanthin-like |Actinoxanthin-like |automated matches |Streptomyces carzinostaticus [TaxId: 1897]
d4atfa_ : (LYS150) (SER178) [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |automated matches |Zobellia galactanivorans [TaxId: 63186]
d2cwpa_ : (PHE66) (GLN83) [view usage] : b.40.4.0 |OB-fold |Nucleic acid-binding proteins |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 53953]
d2yvta1 : (ASN119) (GLY140) [view usage] : d.159.1.6 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |TT1561-like |Uncharacterized protein Aq_1956 |Aquifex aeolicus [TaxId: 63363]
d1iv8a1 : (GLY701) (ARG719) [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Maltooligosyl trehalose synthase |Sulfolobus acidocaldarius [TaxId: 2285]
d1ojva1 : (THR21) (LYS51) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Complement decay-accelerating factor (Daf, CD55) |Human (Homo sapiens) [TaxId: 9606]
d1gmwd1 : (GLY47) (ALA69) [view usage] : b.107.1.1 |Urease metallochaperone UreE, N-terminal domain |Urease metallochaperone UreE, N-terminal domain |Urease metallochaperone UreE, N-terminal domain |Urease metallochaperone UreE, N-terminal domain |Klebsiella aerogenes [TaxId: 28451]
d4cela_ : (GLN118) (SER148) [view usage] : b.29.1.10 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolase family 7 catalytic core |Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) |Trichoderma reesei, Cel7A [TaxId: 51453]
d3l9rb_ : (GLU68) (ARG96) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |beta2-microglobulin |Cow (Bos taurus) [TaxId: 9913]
d2yf5b_ : (ASP68) (PRO96) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d3iwzc1 : (THR54) (SER82) [view usage] : b.82.3.0 |Double-stranded beta-helix |cAMP-binding domain-like |automated matches |automated matches |Xanthomonas campestris [TaxId: 340]
d2fava_ : (LEU72) (VAL97) [view usage] : c.50.1.2 |Macro domain-like |Macro domain-like |Macro domain |automated matches |SARS coronavirus [TaxId: 227859]
d3dkud_ : (PHE2) (GLN33) [view usage] : d.113.1.0 |Nudix |Nudix |automated matches |automated matches |Escherichia coli [TaxId: 405955]
d1daba_ : (ASN442) (GLN468) [view usage] : b.80.1.7 |Single-stranded right-handed beta-helix |Pectin lyase-like |Virulence factor P.69 pertactin |Virulence factor P.69 pertactin |Bordetella pertussis [TaxId: 520]
d3vlbb_ : (SER7) (ASN25) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Fungus (Aspergillus aculeatus) [TaxId: 5053]
d1ujxa_ : (PRO28) (ALA62) [view usage] : b.26.1.2 |SMAD/FHA domain |SMAD/FHA domain |FHA domain |Polynucleotide kinase 3'-phosphatase |Mouse (Mus musculus) [TaxId: 10090]
d2h0bd_ : (PRO300) (GLY325) [view usage] : b.29.1.4 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Laminin G-like module |Ligand-binding domain of neurexin 1beta |Cow (Bos taurus) [TaxId: 9913]
d4ewga2 : (GLU379) (ARG408) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Burkholderia phymatum [TaxId: 391038]
d1yq2a2 : (ASN281) (ARG311) [view usage] : b.1.4.1 |Immunoglobulin-like beta-sandwich |beta-Galactosidase/glucuronidase domain |beta-Galactosidase/glucuronidase domain |beta-Galactosidase, domains 2 and 4 |Arthrobacter sp. c2-2 [TaxId: 192168]
d2q2ga2 : (GLU128) (PHE159) [view usage] : b.4.1.0 |HSP40/DnaJ peptide-binding domain |HSP40/DnaJ peptide-binding domain |automated matches |automated matches |Cryptosporidium parvum [TaxId: 353152]
d1hfha2 : (ASP82) (GLY110) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Factor H, 15th and 16th modules |Human (Homo sapiens) [TaxId: 9606]
d2b5ua2 : (ALA86) (SER108) [view usage] : b.110.1.1 |Cloacin translocation domain |Cloacin translocation domain |Cloacin translocation domain |Colicin E3 N-terminal domain |Escherichia coli [TaxId: 562]
d1bsha2 : (THR43) (TYR63) [view usage] : b.93.1.1 |Epsilon subunit of F1F0-ATP synthase N-terminal domain |Epsilon subunit of F1F0-ATP synthase N-terminal domain |Epsilon subunit of F1F0-ATP synthase N-terminal domain |Epsilon subunit of F1F0-ATP synthase N-terminal domain |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.80, b.82, d.159, i.1, b.29, c.82, d.157, c.23, b.40, c.95, b.18, b.1, b.42, c.50, b.26, b.34, b.97, d.15, b.43, b.3,
d.113, b.71, g.18, b.23, d.66, b.4, b.151, b.78, b.93, b.110, b.107