Tableau information
Concept source: d1t23a_ amino acid (a.a.) range (LEU47)(ARG88)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU47) (GLY51) E1
(LYS53) (LYS62) E2
(PHE83) (ARG88) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 160.2° E2
E3 -41.0° 157.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4jeyb_ : (VAL29) (ILE45) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Salmonella typhimurium [TaxId: 99287]
d3ieza_ : (VAL1506) (ILE1537) [view usage] : d.332.1.1 |RGC domain-like |RGC domain-like |RGC domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4gypd1 : (SER6) (GLU53) [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2exna1 : (SER49) (PRO70) [view usage] : b.165.1.1 |MOSC N-terminal domain-like |MOSC N-terminal domain-like |MOSC N-terminal domain-like |Hypothetical protein BB0938 |Bordetella bronchiseptica [TaxId: 518]
d3kk1a1 : (LEU325) (GLY359) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
d2auwb2 : (THR10) (GLY35) [view usage] : d.331.1.1 |NE0471 N-terminal domain-like |NE0471 N-terminal domain-like |NE0471 N-terminal domain-like |Hypothetical protein NE0471 N-terminal domain |Nitrosomonas europaea [TaxId: 915]
d3n5mb_ : (ALA33) (LEU49) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d3wp4a_ : (ASN128) (GLN168) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Neocallimastix patriciarum [TaxId: 4758]
d2e54a_ : (VAL15) (PHE33) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d1nbwa3 : (PRO410) (ALA438) [view usage] : c.55.1.6 |Ribonuclease H-like motif |Actin-like ATPase domain |ATPase domain of dehydratase reactivase alpha subunit |ATPase domain of the glycerol dehydratase reactivase alpha subunit |Klebsiella pneumoniae [TaxId: 573]
d4guha_ : (ASN-7) (GLY12) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Salmonella typhimurium [TaxId: 90371]
d3m8ra1 : (ALA305) (GLU337) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of prokaryotic DNA polymerase |Thermus aquaticus [TaxId: 271]
d4hx3b_ : (ALA7) (THR38) [view usage] : d.84.1.0 |Subtilisin inhibitor |Subtilisin inhibitor |automated matches |automated matches |Streptomyces caespitosus [TaxId: 53502]
d1utca2 : (PHE304) (VAL329) [view usage] : b.69.6.1 |7-bladed beta-propeller |Clathrin heavy-chain terminal domain |Clathrin heavy-chain terminal domain |Clathrin heavy-chain terminal domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1is3a_ : (ASP84) (PRO110) [view usage] : b.29.1.3 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Galectin (animal S-lectin) |Congerin II |Conger eel (Conger myriaster) [TaxId: 7943]
d1ar1b1 : (ASP111) (LEU137) [view usage] : b.6.1.2 |Cupredoxin-like |Cupredoxins |Periplasmic domain of cytochrome c oxidase subunit II |Cytochrome c oxidase |Paracoccus denitrificans [TaxId: 266]
d2d0oc3 : (PRO465) (SER486) [view usage] : c.55.1.6 |Ribonuclease H-like motif |Actin-like ATPase domain |ATPase domain of dehydratase reactivase alpha subunit |Diol dehydratase-reactivating factor large subunit DdrA |Klebsiella oxytoca [TaxId: 571]
d3p73b_ : (LYS6) (MET40) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d2a22b_ : (SER164) (LYS196) [view usage] : d.159.1.7 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |YfcE-like |Vacuolar protein sorting 29, VPS29 |Cryptosporidium parvum [TaxId: 5807]
d1fjra_ : (LYS140) (ARG159) [view usage] : b.102.1.1 |Methuselah ectodomain |Methuselah ectodomain |Methuselah ectodomain |Methuselah ectodomain |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d2c38v1 : (ASP26) (GLY60) [view usage] : d.14.1.4 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |Ribonuclease PH domain 1-like |Exosome complex exonuclease 1, ECX1 |Sulfolobus solfataricus [TaxId: 2287]
d3tzua_ : (ARG10) (ILE36) [view usage] : b.84.1.0 |Barrel-sandwich hybrid |Single hybrid motif |automated matches |automated matches |Mycobacterium marinum [TaxId: 216594]
d4jf1b_ : (VAL29) (ILE45) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Salmonella typhimurium [TaxId: 99287]
d2i7fa_ : (GLY55) (ASP72) [view usage] : b.33.1.0 |ISP domain |ISP domain |automated matches |automated matches |Sphingobium yanoikuyae [TaxId: 13690]
d1b9xa_ : (SER316) (ASN340) [view usage] : b.69.4.1 |7-bladed beta-propeller |WD40 repeat-like |WD40-repeat |beta1-subunit of the signal-transducing G protein heterotrimer |Cow (Bos taurus) [TaxId: 9913]
d2gsmb1 : (ASP133) (GLU157) [view usage] : b.6.1.2 |Cupredoxin-like |Cupredoxins |Periplasmic domain of cytochrome c oxidase subunit II |Cytochrome c oxidase |Rhodobacter sphaeroides [TaxId: 1063]
d4oryb_ : (LEU62) (GLY100) [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1c2aa1 : (GLU12) (VAL56) [view usage] : g.3.13.1 |Knottins (small inhibitors, toxins, lectins) |Bowman-Birk inhibitor, BBI |Bowman-Birk inhibitor, BBI |Bowman-Birk inhibitor, BBI |Barley (Hordeum vulgare) [TaxId: 4513]
d3meda1 : (LEU325) (GLY359) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |automated matches |Hiv-1 m:b_hxb2r [TaxId: 11706]
d2edqa_ : (ARG16) (LYS42) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1vbga2 : (GLY476) (GLU495) [view usage] : c.8.1.1 |The "swivelling" beta/beta/alpha domain |Phosphohistidine domain |Pyruvate phosphate dikinase, central domain |Pyruvate phosphate dikinase, central domain |Maize (Zea mays) [TaxId: 4577]
d1nbwc3 : (PRO410) (ALA438) [view usage] : c.55.1.6 |Ribonuclease H-like motif |Actin-like ATPase domain |ATPase domain of dehydratase reactivase alpha subunit |ATPase domain of the glycerol dehydratase reactivase alpha subunit |Klebsiella pneumoniae [TaxId: 573]
d3ehbb1 : (ASP111) (LEU137) [view usage] : b.6.1.2 |Cupredoxin-like |Cupredoxins |Periplasmic domain of cytochrome c oxidase subunit II |Cytochrome c oxidase |Paracoccus denitrificans [TaxId: 266]
d1fbla1 : (LYS375) (ASP401) [view usage] : b.66.1.1 |4-bladed beta-propeller |Hemopexin-like domain |Hemopexin-like domain |Collagenase (MMP1), C-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
d3hmua_ : (THR40) (ASP57) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Silicibacter pomeroyi [TaxId: 89184]
d2orda_ : (VAL15) (PHE33) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d3b07b_ : (ALA11) (MET50) [view usage] : f.6.1.1 |Leukocidin-like |Leukocidin-like |Leukocidin (pore-forming toxin) |automated matches |Staphylococcus aureus [TaxId: 158878]
d2eiba3 : (ALA172) (PRO209) [view usage] : b.69.1.1 |7-bladed beta-propeller |Galactose oxidase, central domain |Galactose oxidase, central domain |Galactose oxidase, central domain |Fusarium graminearum (Gibberella zeae) [TaxId: 5518]
d1cyxa_ : (LYS125) (VAL150) [view usage] : b.6.1.2 |Cupredoxin-like |Cupredoxins |Periplasmic domain of cytochrome c oxidase subunit II |Quinol oxidase (CyoA) |Escherichia coli [TaxId: 562]
d1s28a_ : (VAL32) (GLY59) [view usage] : d.198.1.1 |Secretion chaperone-like |Type III secretory system chaperone-like |Type III secretory system chaperone |AvrPphF ORF1, chaperone of AvrPphF ORF2 |Pseudomonas syringae pv. phaseolicola [TaxId: 319]
d3iuca2 : (ASN219) (VAL244) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2dsoe_ : (ASN185) (ALA210) [view usage] : b.68.6.1 |6-bladed beta-propeller |Calcium-dependent phosphotriesterase |SGL-like |automated matches |Staphylococcus aureus [TaxId: 1280]
d2dsoe_ : (THR283) (ASN313) [view usage] : b.68.6.1 |6-bladed beta-propeller |Calcium-dependent phosphotriesterase |SGL-like |automated matches |Staphylococcus aureus [TaxId: 1280]
d1c1fa_ : (TYR86) (PRO111) [view usage] : b.29.1.3 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Galectin (animal S-lectin) |Congerin I |Conger eel (Conger myriaster) [TaxId: 7943]
d1c9ub_ : (ARG408) (LYS452) [view usage] : b.68.2.1 |6-bladed beta-propeller |Soluble quinoprotein glucose dehydrogenase |Soluble quinoprotein glucose dehydrogenase |Soluble quinoprotein glucose dehydrogenase |Acinetobacter calcoaceticus [TaxId: 471]
d1ywya1 : (SER24) (PRO46) [view usage] : b.55.2.1 |PH domain-like barrel |PA2021-like |PA2021-like |Hypothetical protein PA2021 |Pseudomonas aeruginosa [TaxId: 287]
d1vefa1 : (VAL32) (ILE48) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Acetylornithine/acetyl-lysine aminotransferase ArgD |Thermus thermophilus [TaxId: 274]
d4kpub_ : (LEU145) (LYS170) [view usage] : c.26.2.0 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |automated matches |automated matches |Acidaminococcus fermentans [TaxId: 591001]
d3b07a_ : (VAL17) (THR57) [view usage] : f.6.1.1 |Leukocidin-like |Leukocidin-like |Leukocidin (pore-forming toxin) |automated matches |Staphylococcus aureus [TaxId: 158878]
d1occb1 : (LEU95) (TYR121) [view usage] : b.6.1.2 |Cupredoxin-like |Cupredoxins |Periplasmic domain of cytochrome c oxidase subunit II |Cytochrome c oxidase |Cow (Bos taurus) [TaxId: 9913]
d4jewb_ : (VAL29) (ILE45) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Salmonella typhimurium [TaxId: 99287]
d1vsap1 : (MET1) (ARG21) [view usage] : b.155.1.1 |L21p-like |L21p-like |Ribosomal protein L21p |Ribosomal protein L21p |Thermus thermophilus [TaxId: 274]
d1jhfa2 : (ARG157) (VAL179) [view usage] : b.87.1.1 |LexA/Signal peptidase |LexA/Signal peptidase |LexA-related |LexA C-terminal domain |Escherichia coli [TaxId: 562]
d1gqea_ : (ILE323) (ASN344) [view usage] : e.38.1.1 |Release factor |Release factor |Release factor |Polypeptide chain release factor 2 (RF2) |Escherichia coli [TaxId: 562]
d3bs8a_ : (GLU40) (ILE56) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |automated matches |Bacillus subtilis [TaxId: 1423]
d1pj5a4 : (PHE632) (SER662) [view usage] : d.250.1.1 |Folate-binding domain |Folate-binding domain |Aminomethyltransferase folate-binding domain |N,N-dimethylglycine oxidase domain 3 |Arthrobacter globiformis [TaxId: 1665]
d2jxya_ : (ALA334) (SER356) [view usage] : b.66.1.0 |4-bladed beta-propeller |Hemopexin-like domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3acla_ : (ILE139) (PRO178) [view usage] : b.82.1.12 |Double-stranded beta-helix |RmlC-like cupins |Pirin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3nx3a_ : (GLU23) (LEU39) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d2c8ie2 : (THR91) (VAL123) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Complement decay-accelerating factor (Daf, CD55) |Human (Homo sapiens) [TaxId: 9606]
d3q8nc_ : (VAL51) (ILE67) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d7prna_ : (MET1) (ARG52) [view usage] : f.4.3.1 |Transmembrane beta-barrels |Porins |Porin |Porin |Rhodopseudomonas blastica, strain DSM2131 [TaxId: 1075]
d4hsvb_ : (SER26) (CYS52) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4g63a_ : (GLY71) (HIS95) [view usage] : c.108.1.23 |HAD-like |HAD-like |5' nucleotidase-like |Cytosolic IMP-GMP specific 5'-nucleotidase |Legionella pneumophila [TaxId: 272624]
d2pb0b_ : (VAL29) (ILE45) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Salmonella typhimurium [TaxId: 99287]
d2a22a1 : (PRO163) (LYS196) [view usage] : d.159.1.7 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |YfcE-like |Vacuolar protein sorting 29, VPS29 |Cryptosporidium parvum [TaxId: 5807]
d4gsxb2 : (LYS363) (GLY395) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Dengue virus 1 [TaxId: 11059]
d2crya1 : (PRO14) (TRP48) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Kin of IRRE-like protein 3, KIRREL3 |Human (Homo sapiens) [TaxId: 9606]
d1h3fb2 : (GLY395) (LEU430) [view usage] : d.66.1.4 |Alpha-L RNA-binding motif |Alpha-L RNA-binding motif |Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain |Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain |Thermus thermophilus [TaxId: 274]
d1fj1b2 : (SER120) (SER156) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
d1xsia2 : (GLY176) (ASN211) [view usage] : b.30.5.11 |Supersandwich |Galactose mutarotase-like |YicI N-terminal domain-like |Putative glucosidase YicI, N-terminal domain |Escherichia coli [TaxId: 562]
d2xzga1 : (PHE304) (CYS328) [view usage] : b.69.6.1 |7-bladed beta-propeller |Clathrin heavy-chain terminal domain |Clathrin heavy-chain terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2onfa1 : (GLU5) (SER29) [view usage] : d.227.1.1 |OsmC-like |OsmC-like |Ohr/OsmC resistance proteins |Hypothetical protein Ta0195 |Thermoplasma acidophilum [TaxId: 2303]
d2i00a1 : (LYS316) (ASP348) [view usage] : d.106.1.4 |SCP-like |SCP-like |EF1021 C-terminal domain-like |Putative acetyltransferase EF2353 |Enterococcus faecalis [TaxId: 1351]
d1g6q3_ : (GLY300) (HIS348) [view usage] : c.66.1.6 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Arginine methyltransferase |Arginine methyltransferase, HMT1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4a19o_ : (HIS46) (LYS84) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, cytoplasmic (60S subunit) |Tetrahymena thermophila [TaxId: 5911]
d3rmua_ : (SER144) (GLN175) [view usage] : d.32.1.0 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4ixma1 : (ASP46) (ARG69) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Hypothetical protein YjiA, N-terminal domain |Escherichia coli [TaxId: 562]
d2bs8a_ : (SER107) (LYS141) [view usage] : b.2.3.5 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |F17c-type adhesin |automated matches |Escherichia coli [TaxId: 562]
d1opoc_ : (PRO315) (ARG347) [view usage] : b.121.4.7 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Tombusviridae-like VP |Carmovirus coat protein |CarMV (Carnation mottle virus) [TaxId: 11986]
d1h54a2 : (LYS228) (THR264) [view usage] : b.30.5.3 |Supersandwich |Galactose mutarotase-like |Glycosyltransferase family 36 N-terminal domain |Lactobacillus maltose phosphorylase, N-terminal domain |Lactobacillus brevis [TaxId: 1580]
d2ckfa1 : (GLY51) (ILE77) [view usage] : b.33.1.0 |ISP domain |ISP domain |automated matches |automated matches |Sphingomonas sp. [TaxId: 279135]
d4noga_ : (SER57) (TYR73) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Toxoplasma gondii [TaxId: 508771]
d2rd2a2 : (LYS169) (MET210) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Glutaminyl-tRNA synthetase (GlnRS) |Escherichia coli K-12 [TaxId: 83333]
d1v7la_ : (LEU115) (GLU135) [view usage] : c.8.2.1 |The "swivelling" beta/beta/alpha domain |LeuD/IlvD-like |LeuD-like |Isopropylmalate isomerase LeuD |Pyrococcus horikoshii [TaxId: 53953]
d2p6ra4 : (PRO205) (ARG228) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Hel308 helicase |Archaeoglobus fulgidus [TaxId: 2234]
d1ukfa_ : (GLY197) (ASP227) [view usage] : d.3.1.10 |Cysteine proteinases |Cysteine proteinases |Avirulence protein Avrpph3 |Avirulence protein Avrpph3 |Pseudomonas syringae pv. phaseolicola [TaxId: 319]
d4iosa_ : (THR64) (ILE90) [view usage] : b.21.1.3 |Virus attachment protein globular domain |Virus attachment protein globular domain |Lactophage receptor-binding protein head domain |automated matches |Lactococcus phage [TaxId: 35345]
d1ss4b_ : (VAL121) (GLU146) [view usage] : d.32.1.6 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Hypothetical protein BC1747 |Hypothetical protein BC1747 |Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]
d1psea_ : (SER26) (ALA61) [view usage] : b.34.4.2 |SH3-like barrel |Electron transport accessory proteins |Photosystem I accessory protein E (PsaE) |Photosystem I accessory protein E (PsaE) |Synechococcus sp., pcc 7002 [TaxId: 1131]
d4a6ta_ : (THR37) (ASP54) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Chromobacterium violaceum [TaxId: 536]
d2p12b_ : (PRO11) (ASP34) [view usage] : b.175.1.1 |FomD barrel-like |FomD-like |FomD-like |Hypothetical protein RHA1_ro00977 |Rhodococcus sp. RHA1 [TaxId: 101510]
d4tw1d_ : (LYS45) (LYS83) [view usage] : f.6.1.0 |Leukocidin-like |Leukocidin-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 451516]
d3lbea_ : (THR84) (VAL122) [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Streptococcus mutans [TaxId: 210007]
d4i88a_ : (ILE35) (TRP59) [view usage] : b.15.1.1 |HSP20-like chaperones |HSP20-like chaperones |HSP20 |Small heat shock protein |Methanococcus jannaschii [TaxId: 2190]
d3vl8a_ : (SER83) (TRP123) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Fungus (Aspergillus aculeatus) [TaxId: 5053]
d1bcpc1 : (LYS105) (PRO137) [view usage] : b.40.2.1 |OB-fold |Bacterial enterotoxins |Bacterial AB5 toxins, B-subunits |Pertussis toxin S2/S3 subunits, C-terminal domain |Bordetella pertussis [TaxId: 520]
d1tgoa1 : (LYS136) (TRP173) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of family B DNA polymerases |Thermococcus gorgonarius [TaxId: 71997]
d3vpda2 : (ASP178) (ASN211) [view usage] : d.142.1.7 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |Lysine biosynthesis enzyme LysX ATP-binding domain |automated matches |Thermus thermophilus [TaxId: 274]
d1iyjb5 : (SER3008) (PHE3033) [view usage] : b.40.4.3 |OB-fold |Nucleic acid-binding proteins |Single strand DNA-binding domain, SSB |OB-fold domains of BRCA2 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1xpyc2 : (ARG6) (GLU53) [view usage] : d.54.1.1 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |Enolase N-terminal domain-like |N-acylamino acid racemase |Deinococcus radiodurans [TaxId: 1299]
d3l70b1 : (LEU24) (LYS52) [view usage] : d.185.1.0 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d2rd1b_ : (PRO40) (ASN62) [view usage] : b.38.1.6 |Sm-like fold |Sm-like ribonucleoproteins |YgdI/YgdR-like |Putative outer membrane lipoprotein STM1585 |Salmonella typhimurium [TaxId: 90371]
d4h6jb_ : (GLN421) (ASN463) [view usage] : d.110.3.0 |Profilin-like |PYP-like sensor domain (PAS domain) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3iira_ : (ASN121) (ASP153) [view usage] : b.42.4.0 |beta-Trefoil |STI-like |automated matches |automated matches |Murraya koenigii [TaxId: 311449]
d4ax4a2 : (ASP434) (GLY475) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Pig (Sus scrofa) [TaxId: 9823]
d1oxua1 : (VAL303) (TYR327) [view usage] : b.40.6.3 |OB-fold |MOP-like |ABC-transporter additional domain |Glucose transport protein GlcV, N-terminal domain |Sulfolobus solfataricus [TaxId: 2287]
d3nx3b_ : (GLU23) (LEU39) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d2mf0a_ : (GLY9) (ALA36) [view usage] : b.151.1.1 |CsrA-like |CsrA-like |CsrA-like |automated matches |Pseudomonas protegens [TaxId: 220664]
d3vbac_ : (ASP118) (LYS139) [view usage] : c.8.2.0 |The "swivelling" beta/beta/alpha domain |LeuD/IlvD-like |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 243232]
d1bh3a_ : (MET1) (ARG52) [view usage] : f.4.3.1 |Transmembrane beta-barrels |Porins |Porin |Porin |Rhodopseudomonas blastica, strain DSM2131 [TaxId: 1075]
d1dpia1 : (PRO350) (VAL385) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of prokaryotic DNA polymerase |Escherichia coli [TaxId: 562]
d2p5eb_ : (LYS6) (LEU40) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |beta2-microglobulin |Human (Homo sapiens) [TaxId: 9606]
d4jo5a_ : (VAL21) (SER52) [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |automated matches |Clostridium thermocellum [TaxId: 1094188]
d3h6da1 : (THR3) (GLU33) [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d1e5ta2 : (ASP434) (GLY475) [view usage] : c.69.1.4 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Prolyl oligopeptidase, C-terminal domain |Prolyl oligopeptidase, C-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
d4nogb_ : (SER57) (TYR73) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Toxoplasma gondii [TaxId: 508771]
d1kbla2 : (GLU473) (GLU492) [view usage] : c.8.1.1 |The "swivelling" beta/beta/alpha domain |Phosphohistidine domain |Pyruvate phosphate dikinase, central domain |Pyruvate phosphate dikinase, central domain |Clostridium symbiosum [TaxId: 1512]
d3n5ma_ : (ALA33) (LEU49) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d1opoa_ : (VAL264) (THR289) [view usage] : b.121.4.7 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Tombusviridae-like VP |Carmovirus coat protein |CarMV (Carnation mottle virus) [TaxId: 11986]
d1c9ia2 : (PHE304) (VAL329) [view usage] : b.69.6.1 |7-bladed beta-propeller |Clathrin heavy-chain terminal domain |Clathrin heavy-chain terminal domain |Clathrin heavy-chain terminal domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2d26a1 : (ILE229) (PHE253) [view usage] : e.1.1.1 |Serpins |Serpins |Serpins |Antitrypsin, alpha-1 |Human (Homo sapiens) [TaxId: 9606]
d5prna_ : (MET1) (ARG52) [view usage] : f.4.3.1 |Transmembrane beta-barrels |Porins |Porin |Porin |Rhodopseudomonas blastica, strain DSM2131 [TaxId: 1075]
d3s42a_ : (ASN-7) (GLY12) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Salmonella enterica [TaxId: 90371]
d1fstb_ : (ILE129) (PRO161) [view usage] : b.1.18.8 |Immunoglobulin-like beta-sandwich |E set domains |RhoGDI-like |Rho GDP-dissociation inhibitor 1, RhoGDI |Human (Homo sapiens) [TaxId: 9606]
d4iuob_ : (ASN-7) (GLY12) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Salmonella enterica [TaxId: 99287]
d2chra2 : (ILE6) (GLY48) [view usage] : d.54.1.1 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |Enolase N-terminal domain-like |Chlormuconate cycloisomerase |Alcaligenes eutrophus [TaxId: 106590]
d1lqla_ : (ILE7) (ALA30) [view usage] : d.227.1.1 |OsmC-like |OsmC-like |Ohr/OsmC resistance proteins |Hypothetical protein MPN625 |Mycoplasma pneumoniae [TaxId: 2104]
d2eh6a_ : (VAL15) (LEU31) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Aquifex aeolicus [TaxId: 224324]
d3gj4c_ : (GLU36) (THR66) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Ran |Human (Homo sapiens) [TaxId: 9606]
d2d7va1 : (SER7) (LEU45) [view usage] : d.227.1.1 |OsmC-like |OsmC-like |Ohr/OsmC resistance proteins |Hypothetical protein VCA0330 |Vibrio cholerae [TaxId: 666]
d1h6s1_ : (GLU1) (ARG52) [view usage] : f.4.3.1 |Transmembrane beta-barrels |Porins |Porin |Porin |Rhodopseudomonas blastica, strain DSM2131 [TaxId: 1075]
d3sv0a_ : (ILE15) (ASN41) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Oryza sativa [TaxId: 39947]
d1f3la_ : (GLU494) (GLN528) [view usage] : c.66.1.6 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Arginine methyltransferase |Arginine methyltransferase, HMT1 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1cjxa2 : (ASP191) (GLU217) [view usage] : d.32.1.3 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Extradiol dioxygenases |4-hydroxyphenylpyruvate dioxygenase, HppD |Pseudomonas fluorescens [TaxId: 294]
d3iezb_ : (VAL1506) (ILE1537) [view usage] : d.332.1.1 |RGC domain-like |RGC domain-like |RGC domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2r17a_ : (THR144) (LYS181) [view usage] : d.159.1.7 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |YfcE-like |Vacuolar protein sorting 29, VPS29 |Human (Homo sapiens) [TaxId: 9606]
d4am0r_ : (SER363) (GLY395) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Dengue virus [TaxId: 11070]
d1bpoa2 : (PHE304) (CYS328) [view usage] : b.69.6.1 |7-bladed beta-propeller |Clathrin heavy-chain terminal domain |Clathrin heavy-chain terminal domain |Clathrin heavy-chain terminal domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4jbja2 : (GLU134) (LYS160) [view usage] : b.40.16.0 |OB-fold |HIN-2000 domain-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1z78a1 : (GLN134) (GLU160) [view usage] : b.29.1.4 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Laminin G-like module |Thrombospondin 1 N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1jv2b3 : (VAL653) (VAL682) [view usage] : d.200.1.1 |Integrin beta tail domain |Integrin beta tail domain |Integrin beta tail domain |Integrin beta tail domain |Human (Homo sapiens) [TaxId: 9606]
d2icwa2 : (GLN18) (ARG44) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC alpha chain, N-terminal domain |Mouse (Mus musculus), I-AU [TaxId: 10090]
d2ynga1 : (LEU325) (GLY359) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |automated matches |Hiv-1 m:b_hxb2r [TaxId: 11706]
d1rhfa2 : (PRO147) (LEU181) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Tyrosine-protein kinase receptor tyro3, second domain |Human (Homo sapiens) [TaxId: 9606]
d1zkpa1 : (MSE1) (ASP34) [view usage] : d.157.1.9 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |YhfI-like |Hypothetical protein BA1088 (BAS1016) |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d2cnxa_ : (SER175) (ASP199) [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2wfba_ : (ARG6) (ASP44) [view usage] : c.55.5.0 |Ribonuclease H-like motif |Nitrogenase accessory factor-like |automated matches |automated matches |Desulfovibrio gigas [TaxId: 879]
d1plqa1 : (THR87) (LYS117) [view usage] : d.131.1.2 |DNA clamp |DNA clamp |DNA polymerase processivity factor |Proliferating cell nuclear antigen (PCNA) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2qeda1 : (ASN2) (ASP28) [view usage] : d.157.1.2 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Glyoxalase II (hydroxyacylglutathione hydrolase) |Glyoxalase II (hydroxyacylglutathione hydrolase) |Salmonella typhimurium [TaxId: 90371]
d1edya_ : (THR7) (LYS49) [view usage] : b.1.29.1 |Immunoglobulin-like beta-sandwich |Macroglobulin |Alpha-macroglobulin receptor domain |alpha-1-macroglobulin |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3v8oa2 : (VAL670) (ASP708) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2e11a_ : (ALA77) (ASP108) [view usage] : d.160.1.0 |Carbon-nitrogen hydrolase |Carbon-nitrogen hydrolase |automated matches |automated matches |Xanthomonas campestris pv. campestris [TaxId: 340]
d4ba4a_ : (THR37) (GLY55) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Chromobacterium violaceum [TaxId: 536]
d1yaic_ : (LEU3) (GLU33) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase, SOD |Photobacterium leiognathi [TaxId: 553611]
d1tgla_ : (ASP48) (SER82) [view usage] : c.69.1.17 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Fungal lipases |Triacylglycerol lipase |Rhizomucor miehei [TaxId: 4839]
d3zk3a_ : (ILE26) (PRO47) [view usage] : c.92.2.4 |Chelatase-like |"Helical backbone" metal receptor |TM0189-like |Enterochelin uptake protein CeuE |Campylobacter jejuni [TaxId: 197]
d1olza1 : (GLY538) (GLN569) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Semaphorin 4d Ig-like domain |Human (Homo sapiens) [TaxId: 9606]
d1gvia2 : (ASP507) (ILE535) [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Maltogenic amylase |Thermus sp. [TaxId: 275]
d1kkha1 : (SER37) (ASN63) [view usage] : d.14.1.5 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |GHMP Kinase, N-terminal domain |Mevalonate kinase |Methanococcus jannaschii [TaxId: 2190]
d1edyb_ : (THR7) (LYS49) [view usage] : b.1.29.1 |Immunoglobulin-like beta-sandwich |Macroglobulin |Alpha-macroglobulin receptor domain |alpha-1-macroglobulin |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2ooyb_ : (HIS264) (MET292) [view usage] : d.353.1.1 |AMPKBI-like |AMPKBI-like |AMPKBI-like |AMP-activated protein kinase beta subunit |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d1zy9a1 : (PHE13) (GLY41) [view usage] : b.30.5.11 |Supersandwich |Galactose mutarotase-like |YicI N-terminal domain-like |Alpha-galactosidase GalA N-terminal domain |Thermotoga maritima [TaxId: 2336]
d2e7ua_ : (VAL39) (LEU55) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d1p4ua_ : (MET680) (GLN713) [view usage] : b.1.10.2 |Immunoglobulin-like beta-sandwich |Clathrin adaptor appendage domain |gamma-adaptin C-terminal appendage domain-like |ADP-ribosylation factor binding protein Gga3 domain |Human (Homo sapiens) [TaxId: 9606]
d2bsea_ : (ALA216) (GLY245) [view usage] : b.21.1.3 |Virus attachment protein globular domain |Virus attachment protein globular domain |Lactophage receptor-binding protein head domain |receptor binding protein, rbp, C-terminal domain |Lactococcus lactis phage p2 [TaxId: 100641]
d1maeh_ : (GLU79) (PRO116) [view usage] : b.69.2.1 |7-bladed beta-propeller |YVTN repeat-like/Quinoprotein amine dehydrogenase |Methylamine dehydrogenase, H-chain |Methylamine dehydrogenase, H-chain |Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, e.8, c.1, b.82, c.67, c.69, d.159, b.69, i.1, c.108, b.29, c.26, b.30, c.92, d.157, c.66, f.4, d.144, b.40, c.37,
d.185, c.55, b.60, d.14, b.121, d.3, b.2, b.6, b.85, d.32, d.160, b.1, d.110, b.42, c.8, d.38, b.84, d.19, b.21, d.106,
d.250, b.55, d.142, d.131, e.1, b.34, b.38, b.87, d.54, d.227, b.71, b.15, e.38, g.18, b.33, b.66, d.198, d.9, f.6, g.3,
d.332, d.66, b.151, b.102, b.175, d.84, d.353, b.165, d.247, d.331, d.200, b.155