Tableau information
Concept source: d1p9mc1 amino acid (a.a.) range (PHE168)(GLN190)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: EEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PHE168) (SER178) E1
(GLY180) (SER184) E2
(LYS185) (GLN190) E3
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 155.3° E2
E3 145.9° 42.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1kiaa_ : (MET215) (TYR243) [view usage] : c.66.1.5 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Glycine N-methyltransferase |Glycine N-methyltransferase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1nezh_ : (GLY98) (GLN120) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |CD8 |Mouse (Mus musculus) [TaxId: 10090]
d1ms5a2 : (ASP128) (LYS160) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Trypanosoma sialidase |Trypanosoma cruzi [TaxId: 5693]
d2z35a_ : (ALA86) (PRO116) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2c1oa1 : (TYR86) (LEU106) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2vngb_ : (LYS179) (LYS206) [view usage] : b.18.1.33 |Galactose-binding domain-like |Galactose-binding domain-like |NPCBM-like |automated matches |Clostridium perfringens [TaxId: 1502]
d4hija1 : (TYR87) (ILE106) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1d3ei_ : (GLY154) (PHE185) [view usage] : i.6.1.1 |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |HRV16 complexed with d1d2-ICAM-1 |Human rhinovirus 16 [TaxId: 31708]
d3czua_ : (LYS176) (CYS201) [view usage] : b.18.1.0 |Galactose-binding domain-like |Galactose-binding domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ciia2 : (ARG299) (ILE326) [view usage] : h.4.3.1 |Antiparallel coiled-coil |Colicin Ia, N-terminal domain |Colicin Ia, N-terminal domain |Colicin Ia, N-terminal domain |Escherichia coli [TaxId: 562]
d4omca2 : (GLY545) (GLY572) [view usage] : b.18.1.0 |Galactose-binding domain-like |Galactose-binding domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3ab0c_ : (TYR86) (ILE106) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1ktga_ : (VAL3) (HIS38) [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |Diadenosine tetraphosphate hydrolase (Ap4A hydrolase) |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d3qehb1 : (TYR86) (ILE105) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2vnga1 : (LYS179) (LYS206) [view usage] : b.18.1.33 |Galactose-binding domain-like |Galactose-binding domain-like |NPCBM-like |Uncharacterized protein CPE0329 |Clostridium perfringens [TaxId: 1502]
d1sr8a_ : (ALA87) (VAL110) [view usage] : e.54.1.1 |CbiD-like |CbiD-like |CbiD-like |Cobalamin biosynthesis protein CbiD |Archaeoglobus fulgidus [TaxId: 2234]
d3srga_ : (GLU53) (PRO72) [view usage] : b.68.6.2 |6-bladed beta-propeller |Calcium-dependent phosphotriesterase |Serum paraoxonase/arylesterase 1, PON1 |Serum paraoxonase/arylesterase 1, PON1 |Artificial gene [TaxId: 32630]
d1uuna_ : (ASP3) (VAL28) [view usage] : f.6.1.2 |Leukocidin-like |Leukocidin-like |Porin MspA |Porin MspA |Mycobacterium smegmatis [TaxId: 1772]
d2c7wa_ : (VAL31) (GLN55) [view usage] : g.17.1.0 |Cystine-knot cytokines |Cystine-knot cytokines |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1zvoa1 : (ASP86) (VAL107) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain lambda variable domain, VL-lambda |Human (Homo sapiens), cluster 5 [TaxId: 9606]
d4kuce_ : (ALA103) (ILE125) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3ty6a_ : (THR7) (GLY29) [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Bacillus anthracis [TaxId: 198094]
d2bm0a3 : (ASP492) (PRO516) [view usage] : d.14.1.1 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |Translational machinery components |Elongation factor G (EF-G), domain IV |Thermus thermophilus [TaxId: 274]
d2kqna_ : (TYR86) (ILE106) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1owwa_ : (GLY66) (SER93) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Fibronectin, different Fn3 modules |Human (Homo sapiens) [TaxId: 9606]
d4ir8b_ : (ASP184) (GLN204) [view usage] : e.7.1.0 |Carbohydrate phosphatase |Carbohydrate phosphatase |automated matches |automated matches |Toxoplasma gondii [TaxId: 508771]
d1bqua1 : (VAL74) (PHE96) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Cytokine receptor gp130 cytokine-binding domains |Human (Homo sapiens) [TaxId: 9606]
d1yyfc1 : (SER2) (GLY29) [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |HslV (ClpQ) protease |Bacillus subtilis [TaxId: 1423]
d2yxda_ : (ASN150) (ARG183) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 243232]
d3cdfb_ : (HIS87) (ILE106) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1olra_ : (VAL202) (TRP224) [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Family 12 endo-1,4-beta-glucanase (cellulase) catalytic domain |Humicola grisea [TaxId: 5527]
d3lwbb2 : (LEU238) (VAL260) [view usage] : d.142.1.0 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d4mpob_ : (LYS3) (HIS45) [view usage] : d.113.1.0 |Nudix |Nudix |automated matches |automated matches |Chlamydia trachomatis [TaxId: 471472]
d3hfia_ : (VAL131) (LYS154) [view usage] : d.190.1.0 |Chorismate lyase-like |Chorismate lyase-like |automated matches |automated matches |Escherichia coli [TaxId: 217992]
d4doia_ : (ASN37) (GLU66) [view usage] : d.36.1.0 |Chalcone isomerase |Chalcone isomerase |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d4doib_ : (ASN1037) (GLU1066) [view usage] : d.36.1.0 |Chalcone isomerase |Chalcone isomerase |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2vlme1 : (PHE90) (GLU115) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1x51a1 : (GLU18) (THR57) [view usage] : d.113.1.3 |Nudix |Nudix |MutY C-terminal domain-like |A/G-specific adenine DNA glycosylase |Human (Homo sapiens) [TaxId: 9606]
d1ji6a1 : (LYS624) (PRO649) [view usage] : b.18.1.3 |Galactose-binding domain-like |Galactose-binding domain-like |delta-Endotoxin, C-terminal domain |delta-Endotoxin, C-terminal domain |Bacillus thuringiensis, CRY3bb1 [TaxId: 1428]
d1eypa_ : (GLY32) (GLU55) [view usage] : d.36.1.1 |Chalcone isomerase |Chalcone isomerase |Chalcone isomerase |Chalcone isomerase |Alfalfa (Medicago sativa) [TaxId: 3879]
d4kdsa_ : (PHE352) (PRO373) [view usage] : e.1.1.1 |Serpins |Serpins |Serpins |Plasminogen activator inhibitor-1 |Rainbow trout (Oncorhynchus mykiss) [TaxId: 8022]
d1w9pa2 : (ARG301) (ASP327) [view usage] : d.26.3.1 |FKBP-like |Chitinase insertion domain |Chitinase insertion domain |Chitinase 1 |Aspergillus fumigatus [TaxId: 5085]
d3eaaa_ : (ASP4) (LEU28) [view usage] : b.157.1.0 |Hcp1-like |Hcp1-like |automated matches |automated matches |Edwardsiella tarda [TaxId: 636]
d3cu7a3 : (TYR324) (VAL348) [view usage] : b.1.29.4 |Immunoglobulin-like beta-sandwich |Macroglobulin |Complement C3 MG3-like |Complement C5 MG3 |Human (Homo sapiens) [TaxId: 9606]
d3vi3e1 : (TYR91) (LEU111) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1p8jb1 : (GLY545) (GLY572) [view usage] : b.18.1.20 |Galactose-binding domain-like |Galactose-binding domain-like |Proprotein convertase P-domain |Furin, C-terminal domain |Mouse (Mus musculus) [TaxId: 10090]
d1f6fb1 : (LYS73) (ASP96) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Prolactin receptor |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1im9d1 : (ARG78) (ILE101) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Killer cell inhibitory receptor |Human (Homo sapiens), p58-cl42 kir [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.29, c.66, i.6, d.153, b.18, d.14, e.7, b.1, d.142, e.1, d.113, d.26, h.4, g.17, f.6, d.36, b.157, d.190, e.54