Tableau information
Concept source: d2kyha_ amino acid (a.a.) range (GLY12)(HIS24)
nSSEs in this Concept: 2
String of secondary struct.elems. (SSEs) defining this concept: HH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY12) (ILE18) H1
(GLY19) (HIS24) H2
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 19.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2y20a_ : (THR279) (MET330) [view usage] : a.274.1.1 |HAMP domain-like |HAMP domain-like |HAMP domain |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d3fhua_ : (PRO122) (SER136) [view usage] : d.24.1.1 |Pili subunits |Pili subunits |Pilin |automated matches |Salmonella typhi [TaxId: 601]
d1h2ux_ : (LYS120) (ARG139) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |CBP20, 20KDa nuclear cap-binding protein |Human (Homo sapiens) [TaxId: 9606]
d2oifg_ : (SER11) (MET25) [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Barley (Hordeum vulgare) [TaxId: 4513]
d2y21g_ : (THR279) (ALA329) [view usage] : a.274.1.1 |HAMP domain-like |HAMP domain-like |HAMP domain |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d1hy1c_ : (THR17) (GLN32) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]
d4n83a_ : (ALA178) (LEU209) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Streptococcus sanguinis [TaxId: 388919]
d4f79a_ : (ASP393) (GLY414) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Streptococcus mutans [TaxId: 210007]
d2y20c_ : (HIS276) (ALA329) [view usage] : a.274.1.1 |HAMP domain-like |HAMP domain-like |HAMP domain |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d3p73a1 : (GLU56) (ASN84) [view usage] : d.19.1.0 |MHC antigen-recognition domain |MHC antigen-recognition domain |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d4phoc_ : (CYS6) (VAL34) [view usage] : h.4.4.1 |Antiparallel coiled-coil |Bacterial hemolysins |Hemolysin E (HlyE, ClyA, SheA) |automated matches |Escherichia coli [TaxId: 83333]
d3po4a2 : (GLU424) (GLY448) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |automated matches |Thermus aquaticus [TaxId: 271]
d3ntwc_ : (ALA2382) (ALA2393) [view usage] : a.144.1.1 |PABP domain-like |PABC (PABP) domain |PABC (PABP) domain |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4a17v_ : (GLU7) (GLY70) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, cytoplasmic (60S subunit) |Tetrahymena thermophila [TaxId: 5911]
d1hv5a_ : (ASP212) (LEU260) [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Stromelysin-3 (MMP-11) |Mouse (Mus musculus) [TaxId: 10090]
d3gpba_ : (PRO794) (GLY826) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1zowa2 : (GLY203) (ASN226) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 196620]
d2l7ia_ : (THR279) (GLU331) [view usage] : a.274.1.1 |HAMP domain-like |HAMP domain-like |HAMP domain |Hypothetical protein AF1503 |Archaeoglobus fulgidus [TaxId: 2234]
d3b5ng_ : (SER432) (LEU499) [view usage] : h.1.15.1 |Parallel coiled-coil |SNARE fusion complex |SNARE fusion complex |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1biya2 : (ALA482) (ALA503) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Domestic water buffalo (Bubalus arnee bubalis) [TaxId: 89462]
d3qmlb2 : (ASN351) (GLY370) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1k7wb_ : (PRO21) (GLN34) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]
d3hoaa_ : (ARG495) (LEU508) [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |Thermus thermophilus [TaxId: 262724]
d1vk5a_ : (LEU39) (VAL52) [view usage] : a.220.1.1 |Hypothetical protein At3g22680 |Hypothetical protein At3g22680 |Hypothetical protein At3g22680 |Hypothetical protein At3g22680 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d4etmb_ : (PHE132) (GLN155) [view usage] : c.44.1.0 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d2oifa_ : (GLU12) (MET25) [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Barley (Hordeum vulgare) [TaxId: 4513]
d3zxwb_ : (SER20) (GLY35) [view usage] : d.73.1.1 |RuBisCO, small subunit |RuBisCO, small subunit |RuBisCO, small subunit |automated matches |Thermosynechococcus elongatus [TaxId: 197221]
d1kdga2 : (PRO639) (PRO660) [view usage] : d.16.1.1 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |GMC oxidoreductases |Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), substrate-binding domain |Basidomycetes fungus (Phanerochaete chrysosporium) [TaxId: 5306]
d2vsub_ : (THR230) (LEU248) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
d1noia_ : (PRO794) (GLY826) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1kilc_ : (SER10) (ASP80) [view usage] : h.1.15.1 |Parallel coiled-coil |SNARE fusion complex |SNARE fusion complex |Synaptosomal-associated protein SNAP-25 |Human (Homo sapiens) [TaxId: 9606]
d2abma1 : (GLY199) (LEU227) [view usage] : f.19.1.1 |Aquaporin-like |Aquaporin-like |Aquaporin-like |Aquaporin Z |Escherichia coli [TaxId: 562]
d2l7ha_ : (MET277) (GLU331) [view usage] : a.274.1.1 |HAMP domain-like |HAMP domain-like |HAMP domain |Hypothetical protein AF1503 |Archaeoglobus fulgidus [TaxId: 2234]
d1nhla_ : (SER28) (LEU81) [view usage] : h.1.15.1 |Parallel coiled-coil |SNARE fusion complex |SNARE fusion complex |Synaptosomal-associated protein SNAP-23 |Human (Homo sapiens) [TaxId: 9606]
d1phpa_ : (PHE169) (SER183) [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Bacillus stearothermophilus [TaxId: 1422]
d1uuqa_ : (GLU405) (GLN430) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Exomannosidase |Cellvibrio mixtus [TaxId: 39650]
d4bqfb_ : (ARG802) (ASN834) [view usage] : c.87.1.0 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1m1jb2 : (VAL98) (CYS198) [view usage] : h.1.8.1 |Parallel coiled-coil |Fibrinogen coiled-coil and central regions |Fibrinogen coiled-coil and central regions |Fibrinogen beta chain |Chicken (Gallus gallus) [TaxId: 9031]
d2y0qd_ : (SER278) (MET330) [view usage] : a.274.1.1 |HAMP domain-like |HAMP domain-like |HAMP domain |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d3e1va_ : (SER197) (ILE214) [view usage] : c.53.2.1 |Resolvase-like |beta-carbonic anhydrase, cab |beta-carbonic anhydrase, cab |automated matches |Haemophilus influenzae [TaxId: 727]
d4ejhh_ : (LEU288) (HIS320) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3dbxa1 : (GLU65) (GLY92) [view usage] : d.19.1.0 |MHC antigen-recognition domain |MHC antigen-recognition domain |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d1v5ha_ : (PRO144) (GLY170) [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Cytoglobin |Human (Homo sapiens) [TaxId: 9606]
d2dkxa_ : (LEU8) (TRP27) [view usage] : a.60.1.0 |SAM domain-like |SAM/Pointed domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1i10a2 : (THR308) (LEU329) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |Lactate dehydrogenase |Human (Homo sapiens), muscle isoform (M chain) [TaxId: 9606]
d1vjoa_ : (LYS366) (ARG381) [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |Alanine-glyoxylate aminotransferase |Nostoc sp. PCC 7120 [TaxId: 103690]
d1rgxc_ : (CYS6) (LYS29) [view usage] : g.77.1.1 |Resistin |Resistin |Resistin |Resistin (ADSF, FIZZ3) |Mouse (Mus musculus) [TaxId: 10090]
d3qz6a_ : (GLY234) (LEU253) [view usage] : c.1.12.0 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |automated matches |automated matches |Desulfitobacterium hafniense [TaxId: 272564]
d3esab_ : (SER92) (PRO110) [view usage] : c.69.1.30 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Cutinase-like |automated matches |Fusarium solani [TaxId: 70791]
d1woqa2 : (SER194) (PHE213) [view usage] : c.55.1.10 |Ribonuclease H-like motif |Actin-like ATPase domain |ROK |Inorganic polyphosphate/ATP-glucomannokinase PPGMK |Arthrobacter sp. KM [TaxId: 184230]
d3fcca_ : (LYS2) (PRO15) [view usage] : e.23.1.0 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |automated matches |automated matches |Bacillus cereus [TaxId: 226900]
d1urqc_ : (ARG16) (GLY82) [view usage] : h.1.15.1 |Parallel coiled-coil |SNARE fusion complex |SNARE fusion complex |Synaptosomal-associated protein SNAP-25 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2vrzb_ : (SER49) (GLN88) [view usage] : a.25.3.0 |Ferritin-like |EsxAB dimer-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
d2fk6a1 : (GLY95) (LYS108) [view usage] : d.157.1.7 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |RNase Z-like |Ribonuclease Z (RNase Z) |Bacillus subtilis [TaxId: 1423]
d2oqmc_ : (VAL63) (GLU100) [view usage] : a.213.1.3 |DinB/YfiT-like putative metalloenzymes |DinB/YfiT-like putative metalloenzymes |Sden0562-like |Hypothetical protein Sden0562 |Shewanella denitrificans [TaxId: 192073]
d1c50a_ : (PRO794) (ILE824) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d3kx5a_ : (ARG79) (GLU93) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
d2y0qa_ : (ILE280) (ALA329) [view usage] : a.274.1.1 |HAMP domain-like |HAMP domain-like |HAMP domain |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d2y21e_ : (SER278) (MET330) [view usage] : a.274.1.1 |HAMP domain-like |HAMP domain-like |HAMP domain |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d1enia_ : (ALA13) (GLY38) [view usage] : a.18.1.1 |T4 endonuclease V |T4 endonuclease V |T4 endonuclease V |T4 endonuclease V |Bacteriophage T4 [TaxId: 10665]
d2yy2b_ : (VAL475) (LEU503) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1rfya_ : (PRO67) (LEU93) [view usage] : a.2.13.1 |Long alpha-hairpin |Transcriptional repressor TraM |Transcriptional repressor TraM |Transcriptional repressor TraM |Agrobacterium tumefaciens [TaxId: 358]
d1mx1a_ : (LYS1540) (LYS1553) [view usage] : c.69.1.1 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetylcholinesterase-like |Mammalian carboxylesterase (liver carboxylesterase I) |Human (Homo sapiens) [TaxId: 9606]
d2o25b2 : (ASN3) (SER19) [view usage] : d.20.1.1 |UBC-like |UBC-like |UBC-related |Ubiquitin-conjugating enzyme E2-25 kDa, E2 domain |Human (Homo sapiens) [TaxId: 9606]
d1v6aa2 : (LYS309) (LEU330) [view usage] : d.162.1.0 |LDH C-terminal domain-like |LDH C-terminal domain-like |automated matches |automated matches |Carp (Cyprinus carpio) [TaxId: 7962]
d4ld5e_ : (SER120) (GLN139) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
d1ktba2 : (TRP206) (GLN220) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Melibiase |Chicken (Gallus gallus) [TaxId: 9031]
d2ouna_ : (PRO746) (GLY768) [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1hdgo2 : (CYS149) (LYS164) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |Thermotoga maritima [TaxId: 2336]
d3gxkb_ : (SER17) (ASP41) [view usage] : d.2.1.5 |Lysozyme-like |Lysozyme-like |G-type lysozyme |automated matches |Atlantic cod (Gadus morhua) [TaxId: 8049]
d1yv0i1 : (ARG7) (ALA45) [view usage] : h.1.25.2 |Parallel coiled-coil |Troponin coil-coiled subunits |Troponin I |Troponin I |Chicken (Gallus gallus) [TaxId: 9031]
d1f99a_ : (THR3) (GLY16) [view usage] : a.1.1.3 |Globin-like |Globin-like |Phycocyanin-like phycobilisome proteins |Phycocyanin alpha subunit |Red alga (Polysiphonia urceolata) [TaxId: 65404]
d2fxoc_ : (SER-2) (ALA962) [view usage] : h.1.26.1 |Parallel coiled-coil |Myosin rod fragments |Myosin rod fragments |Myosin heavy chain, cardiac muscle beta isoform |Human (Homo sapiens) [TaxId: 9606]
d1ln1a_ : (GLU10) (GLN22) [view usage] : d.129.3.2 |TBP-like |Bet v1-like |STAR domain |Phosphatidylcholine transfer protein |Human (Homo sapiens) [TaxId: 9606]
d1h2uy_ : (LYS120) (ARG139) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |CBP20, 20KDa nuclear cap-binding protein |Human (Homo sapiens) [TaxId: 9606]
d1x1pa1 : (PHE138) (GLY188) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |Class II ribonuclease H (RNase HII) |Pyrococcus horikoshii [TaxId: 53953]
d4osja_ : (LEU238) (PRO251) [view usage] : a.298.1.1 |Left-handed alpha-alpha superhelix |TAL effector-like |TAL (transcription activator-like) effector |automated matches |Xanthomonas campestris [TaxId: 329463]
d1ckva_ : (ILE12) (PHE25) [view usage] : d.137.1.1 |Monooxygenase (hydroxylase) regulatory protein |Monooxygenase (hydroxylase) regulatory protein |Monooxygenase (hydroxylase) regulatory protein |Soluble methane monooxygenase regulatory protein B |Escherichia coli [TaxId: 562]
d1v9fa_ : (GLN303) (VAL323) [view usage] : d.265.1.3 |Pseudouridine synthase |Pseudouridine synthase |Pseudouridine synthase RsuA/RluD |Ribosomal large subunit pseudouridine synthase D, RluD |Escherichia coli [TaxId: 562]
d2y21h_ : (PRO283) (ALA329) [view usage] : a.274.1.1 |HAMP domain-like |HAMP domain-like |HAMP domain |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d4fyqa2 : (ASP315) (ASP333) [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3v09a2 : (PRO366) (VAL388) [view usage] : a.126.1.0 |Serum albumin-like |Serum albumin-like |automated matches |automated matches |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d2y20d_ : (SER278) (MET330) [view usage] : a.274.1.1 |HAMP domain-like |HAMP domain-like |HAMP domain |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d3b5nk_ : (LYS434) (LYS497) [view usage] : h.1.15.1 |Parallel coiled-coil |SNARE fusion complex |SNARE fusion complex |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2oura_ : (PRO746) (GLY768) [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1u5dd_ : (SER194) (SER213) [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Src kinase-associated phosphoprotein SKAP55 (SCAP1) |Human (Homo sapiens) [TaxId: 9606]
d1xvla1 : (THR306) (LEU323) [view usage] : c.92.2.2 |Chelatase-like |"Helical backbone" metal receptor |TroA-like |Mn transporter MntC |Synechocystis sp. PCC 6803 [TaxId: 1148]
d2lpca_ : (ASN158) (GLU171) [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |Apoptosis regulator Bcl-xL |Human (Homo sapiens) [TaxId: 9606]
d2y0ta_ : (ARG282) (MET330) [view usage] : a.274.1.1 |HAMP domain-like |HAMP domain-like |HAMP domain |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d2gtlo3 : (GLN8) (GLU58) [view usage] : h.1.32.1 |Parallel coiled-coil |Heterotrimerisation domain of extracellular hemoglobin linker subunits |Heterotrimerisation domain of extracellular hemoglobin linker subunits |Extracellular hemoglobin linker l3 |Common earthworm (Lumbricus terrestris) [TaxId: 6398]
d2d0fa3 : (SER326) (LEU344) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Thermoactinomyces vulgaris [TaxId: 2026]
d1lj8a3 : (THR289) (GLY314) [view usage] : a.100.1.9 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |Mannitol 2-dehydrogenase |Mannitol 2-dehydrogenase |Pseudomonas fluorescens [TaxId: 294]
d3qvma_ : (ASP262) (ASN277) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Oleispira antarctica [TaxId: 188908]
d2e7sg_ : (GLU32) (LYS140) [view usage] : h.1.33.1 |Parallel coiled-coil |Sec2 N-terminal region |Sec2 N-terminal region |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1ga3a_ : (THR8) (THR21) [view usage] : a.26.1.2 |4-helical cytokines |4-helical cytokines |Short-chain cytokines |Interleukin-13 (IL-13) |Human (Homo sapiens) [TaxId: 9606]
d1yuca_ : (HIS303) (ARG333) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1w26a1 : (THR249) (ASN298) [view usage] : a.223.1.1 |Triger factor/SurA peptide-binding domain-like |Triger factor/SurA peptide-binding domain-like |TF C-terminus |Trigger factor, C-terminal domain |Escherichia coli [TaxId: 562]
d4a17y_ : (THR73) (LYS102) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, cytoplasmic (60S subunit) |Tetrahymena thermophila [TaxId: 5911]
d2ouva_ : (PRO746) (GLY768) [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1n52b_ : (LYS120) (ARG139) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |CBP20, 20KDa nuclear cap-binding protein |Human (Homo sapiens) [TaxId: 9606]
d4dnza_ : (LEU362) (VAL379) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 316058]
d4u3wb_ : (PRO104) (THR129) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d1b1ua_ : (ARG87) (THR99) [view usage] : a.52.1.2 |Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |Proteinase/alpha-amylase inhibitors |Trypsin/alpha-amylase inhibitor RBI |Eleusine coracana, seeds [TaxId: 4511]
d1q89a_ : (THR236) (LYS251) [view usage] : e.47.1.1 |39 kda initiator binding protein, IBP39, C-terminal domains |39 kda initiator binding protein, IBP39, C-terminal domains |39 kda initiator binding protein, IBP39, C-terminal domains |39 kda initiator binding protein, IBP39, C-terminal domains |Trichomonas vaginalis [TaxId: 5722]
d2y21d_ : (MET277) (GLU331) [view usage] : a.274.1.1 |HAMP domain-like |HAMP domain-like |HAMP domain |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d2pbib_ : (GLU10) (GLU43) [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2f9ma_ : (ASN167) (ASP188) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Rab11b |Human (Homo sapiens) [TaxId: 9606]
d1mlwa_ : (GLU168) (TYR185) [view usage] : d.178.1.1 |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Aromatic aminoacid monoxygenases, catalytic and oligomerization domains |Tryptophan hydroxylase |Human (Homo sapiens) [TaxId: 9606]
d1umba_ : (ASP211) (GLY229) [view usage] : c.36.1.11 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase PP module |Branched-chain alpha-keto acid dehydrogenase, PP module |Thermus thermophilus [TaxId: 274]
d2yxda_ : (VAL133) (GLY148) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 243232]
d2ddze_ : (PRO161) (LYS185) [view usage] : d.104.1.4 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |PH0223-like |Uncharacterized protein PH0223 |Pyrococcus horikoshii [TaxId: 53953]
d1h89a_ : (TYR274) (LEU334) [view usage] : h.1.3.1 |Parallel coiled-coil |Leucine zipper domain |Leucine zipper domain |C/ebp beta |Human (Homo sapiens) [TaxId: 9606]
d2pwza2 : (SER285) (VAL310) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1g4us1 : (SER167) (MET189) [view usage] : a.24.11.1 |Four-helical up-and-down bundle |Bacterial GAP domain |Bacterial GAP domain |SptP tyrosine phosphatase |Salmonella typhimurium [TaxId: 90371]
d2j5ie_ : (THR230) (ASP249) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
d1ixcb1 : (THR58) (ARG87) [view usage] : a.4.5.37 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |LysR-like transcriptional regulators |LysR-type regulatory protein CbnR |Ralstonia eutropha [TaxId: 106590]
d1sbpa_ : (TRP290) (LYS309) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Sulphate-binding protein |Salmonella typhimurium [TaxId: 90371]
d2y20b_ : (HIS276) (MET330) [view usage] : a.274.1.1 |HAMP domain-like |HAMP domain-like |HAMP domain |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d3n8ia_ : (SER136) (LYS155) [view usage] : c.44.1.1 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |Low-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens) [TaxId: 9606]
d1ez4b1 : (SER105) (SER127) [view usage] : c.2.1.5 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |LDH N-terminal domain-like |Lactate dehydrogenase |Lactobacillus pentosus [TaxId: 1589]
d1enka_ : (ALA13) (GLY38) [view usage] : a.18.1.1 |T4 endonuclease V |T4 endonuclease V |T4 endonuclease V |T4 endonuclease V |Bacteriophage T4 [TaxId: 10665]
d1frta2 : (TRP61) (GLN85) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Fc (IgG) receptor, alpha-1 and alpha-2 domains |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3pqka_ : (GLU16) (LEU32) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Xylella fastidiosa [TaxId: 2371]
d1dzea_ : (GLU9) (MET32) [view usage] : f.13.1.1 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |Bacteriorhodopsin-like |Bacteriorhodopsin |Halobacterium salinarum [TaxId: 2242]
d3ptka_ : (ASP413) (GLY433) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Rice (Oryza sativa) [TaxId: 4530]
d1h2tz_ : (LYS120) (ARG139) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |CBP20, 20KDa nuclear cap-binding protein |Human (Homo sapiens) [TaxId: 9606]
d1c7ua_ : (ASP12) (ALA38) [view usage] : d.88.1.1 |SRF-like |SRF-like |SRF-like |Myocyte enhancer factor Mef2a core |Human (Homo sapiens) [TaxId: 9606]
d2oife_ : (SER11) (MET25) [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Barley (Hordeum vulgare) [TaxId: 4513]
d1qssa2 : (GLU423) (GLY448) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |DNA polymerase I (Klenow fragment) |Thermus aquaticus [TaxId: 271]
d2y21b_ : (PRO283) (VAL328) [view usage] : a.274.1.1 |HAMP domain-like |HAMP domain-like |HAMP domain |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d2e7sb_ : (LEU31) (LEU151) [view usage] : h.1.33.1 |Parallel coiled-coil |Sec2 N-terminal region |Sec2 N-terminal region |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2y0qb_ : (THR281) (LEU326) [view usage] : a.274.1.1 |HAMP domain-like |HAMP domain-like |HAMP domain |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d2lzza_ : (GLY42) (MET58) [view usage] : a.138.1.1 |Multiheme cytochromes |Multiheme cytochromes |Cytochrome c3-like |automated matches |Geobacter sulfurreducens [TaxId: 35554]
d4msha_ : (PRO746) (GLY768) [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1i1ip_ : (GLN251) (GLY272) [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |Neurolysin (endopeptidase 24.16, thimet oligopeptidase) |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1gc5a_ : (ASP211) (GLU225) [view usage] : c.72.1.3 |Ribokinase-like |Ribokinase-like |ADP-specific Phosphofructokinase/Glucokinase |ADP-dependent glucokinase |Thermococcus litoralis [TaxId: 2265]
d3b5nc_ : (SER432) (GLN500) [view usage] : h.1.15.1 |Parallel coiled-coil |SNARE fusion complex |SNARE fusion complex |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3v09a3 : (LYS564) (LEU583) [view usage] : a.126.1.0 |Serum albumin-like |Serum albumin-like |automated matches |automated matches |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d4bwja2 : (GLU424) (GLY448) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |automated matches |Thermus aquaticus [TaxId: 271]
d3m8ra2 : (GLU424) (GLY448) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |DNA polymerase I (Klenow fragment) |Thermus aquaticus [TaxId: 271]
d1ls6a_ : (THR269) (LYS283) [view usage] : c.37.1.5 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |PAPS sulfotransferase |Aryl sulfotransferase sult1a |Human (Homo sapiens) [TaxId: 9606]
d1uf0a_ : (GLU95) (VAL108) [view usage] : d.15.11.1 |beta-Grasp (ubiquitin-like) |Doublecortin (DC) |Doublecortin (DC) |Doublecortin-like kinase Dclk |Human (Homo sapiens) [TaxId: 9606]
d1cmna_ : (PRO91) (GLN114) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450-NOR, nitric reductase |Fungus (Fusarium oxysporum) [TaxId: 5507]
d1b0pa1 : (TYR225) (LEU253) [view usage] : c.36.1.8 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |PFOR Pyr module |Pyruvate-ferredoxin oxidoreductase, PFOR, domain I |Desulfovibrio africanus [TaxId: 873]
d2ym0a_ : (GLU133) (LEU178) [view usage] : a.250.1.0 |IpaD-like |IpaD-like |automated matches |automated matches |Salmonella enterica [TaxId: 216597]
d1bs2a3 : (ASN115) (THR129) [view usage] : d.67.2.1 |RRF/tRNA synthetase additional domain-like |Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1cmja_ : (PRO91) (GLN114) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450-NOR, nitric reductase |Fungus (Fusarium oxysporum) [TaxId: 5507]
d1agma_ : (LEU3) (ILE22) [view usage] : a.102.1.1 |alpha/alpha toroid |Six-hairpin glycosidases |Glucoamylase |Glucoamylase |Aspergillus awamori, variant x100 [TaxId: 105351]
d4fu4a1 : (ASN215) (SER264) [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Collagenase-3 (MMP-13) |Human (Homo sapiens) [TaxId: 9606]
d1sfcc_ : (ARG8) (GLY82) [view usage] : h.1.15.1 |Parallel coiled-coil |SNARE fusion complex |SNARE fusion complex |Synaptosomal-associated protein SNAP-25 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2gtln3 : (ASP11) (GLY59) [view usage] : h.1.32.1 |Parallel coiled-coil |Heterotrimerisation domain of extracellular hemoglobin linker subunits |Heterotrimerisation domain of extracellular hemoglobin linker subunits |Extracellular hemoglobin linker l2 subunit |Common earthworm (Lumbricus terrestris) [TaxId: 6398]
d2e7sc_ : (LEU31) (THR148) [view usage] : h.1.33.1 |Parallel coiled-coil |Sec2 N-terminal region |Sec2 N-terminal region |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2y21l_ : (MET277) (ALA329) [view usage] : a.274.1.1 |HAMP domain-like |HAMP domain-like |HAMP domain |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d4jvla_ : (THR268) (GLN282) [view usage] : c.37.1.5 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |PAPS sulfotransferase |Estrogen sulfotransferase (STE, sult1e1) |Human (Homo sapiens) [TaxId: 9606]
d2y21a_ : (PRO283) (GLU331) [view usage] : a.274.1.1 |HAMP domain-like |HAMP domain-like |HAMP domain |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d1sfcf_ : (ALA191) (ALA261) [view usage] : h.1.15.1 |Parallel coiled-coil |SNARE fusion complex |SNARE fusion complex |Syntaxin 1A |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1rjdc_ : (GLU2) (GLY23) [view usage] : c.66.1.37 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Leucine carboxy methyltransferase Ppm1 |Leucine carboxy methyltransferase Ppm1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.298, e.8, c.1, c.67, c.69, c.94, a.104, c.2, d.58, b.69, i.1, c.82, c.92, d.157, a.102, c.66, d.92, c.14, a.127, a.211,
d.129, c.72, c.37, c.36, d.178, d.104, c.55, d.2, c.86, c.95, c.87, d.81, e.23, a.123, d.20, c.53, a.126, a.25, d.19, b.55,
a.1, a.100, a.4, d.67, f.13, d.162, d.137, a.138, d.15, d.16, f.1, f.19, a.24, a.26, h.4, d.73, c.44, d.24, a.60, d.265,
a.52, a.2, a.144, d.88, g.77, e.47, h.1, a.213, f.14, a.220, a.250, a.223, a.274, a.18