Protein Concepts Dictionary

Tableau information

Concept source:  d1ddxa1  amino acid (a.a.) range (GLY324)(GLY354)

nSSEs in this Concept: 2

String of secondary struct.elems. (SSEs) defining this concept: HH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY324)  (LYS342) H1
	  (ILE343)  (GLY354) H2

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1            
H2      -17.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1v4pc_ :     (SER3)   (GLY24)   [view usage] : d.67.1.2 |RRF/tRNA synthetase additional domain-like |ThrRS/AlaRS common domain |AlaX-like |Hypothetical protein PH0574 |Pyrococcus horikoshii [TaxId: 53953]
 d1jaia_ :    (TYR64)   (GLY75)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |cH-p21 Ras protein |Human (Homo sapiens) [TaxId: 9606]
 d1d8ya1 :   (GLU492)  (LYS518)   [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of prokaryotic DNA polymerase |Escherichia coli [TaxId: 562]
 d1v10a3 :   (PRO481)  (ASN493)   [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Laccase |Rigidoporus lignosus [TaxId: 219653]
 d3orfa_ :    (PHE88)  (LYS112)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
 d3pvua1 :    (GLU36)   (ASP49)   [view usage] : a.91.1.1 |Regulator of G-protein signaling, RGS |Regulator of G-protein signaling, RGS |Regulator of G-protein signaling, RGS |G-protein coupled receptor kinase 2, N-terminal domain |Cow (Bos taurus) [TaxId: 9913]
 d1qqgb2 :   (ASP242)  (PHE264)   [view usage] : b.55.1.2 |PH domain-like barrel |PH domain-like |Phosphotyrosine-binding domain (PTB) |Insulin receptor substrate 1, IRS-1 |Human (Homo sapiens) [TaxId: 9606]
 d4gnib1 :   (THR126)  (TYR145)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Chaetomium thermophilum [TaxId: 759272]
 d2yvwa_ :    (MET99)  (ARG112)   [view usage] : d.68.2.0 |IF3-like |EPT/RTPC-like |automated matches |automated matches |Aquifex aeolicus [TaxId: 224324]
 d4gbua_ :   (ASP125)  (ASN155)   [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Old yellow enzyme (OYE) |Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]
 d3osoa_ :    (MET98)  (LYS136)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |automated matches |Staphylococcus aureus [TaxId: 1280]
 d2ajta2 :   (ASP117)  (ARG141)   [view usage] : c.85.1.2 |FucI/AraA N-terminal and middle domains |FucI/AraA N-terminal and middle domains |AraA N-terminal and middle domain-like |L-arabinose isomerase AraA |Escherichia coli [TaxId: 562]
 d1ybka_ :     (SER2)   (SER51)   [view usage] : h.1.19.1 |Parallel coiled-coil |Tetrabrachion |Tetrabrachion |automated matches |Staphylothermus marinus [TaxId: 2280]
 d1rfyb_ :    (PRO67)   (ILE92)   [view usage] : a.2.13.1 |Long alpha-hairpin |Transcriptional repressor TraM |Transcriptional repressor TraM |Transcriptional repressor TraM |Agrobacterium tumefaciens [TaxId: 358]
 d4oufb_ :  (GLU1088) (GLN1104)   [view usage] : a.29.2.1 |Bromodomain-like |Bromodomain |Bromodomain |CREB-binding protein, CBP |Human (Homo sapiens) [TaxId: 9606]
 d1tw8b_ :   (THR222)  (LYS254)   [view usage] : c.52.1.19 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease HincII |Restriction endonuclease HincII |Haemophilus influenzae [TaxId: 727]
 d3rgwl_ :   (MET255)  (GLY291)   [view usage] : e.18.1.0 |HydB/Nqo4-like |HydB/Nqo4-like |automated matches |automated matches |Ralstonia eutropha [TaxId: 381666]
 d1v3ta2 :   (PRO114)  (TYR130)   [view usage] : c.2.1.1 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Alcohol dehydrogenase-like, C-terminal domain |Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase |Guinea pig (Cavia porcellus) [TaxId: 10141]
 d1bxrb2 :   (HIS361)  (LYS379)   [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |Carbamoyl phosphate synthetase, small subunit C-terminal domain |Escherichia coli [TaxId: 562]
 d3txza_ :   (ASP125)  (ASN155)   [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Old yellow enzyme (OYE) |Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]
 d1hk2a3 :   (ASP563)  (VAL576)   [view usage] : a.126.1.1 |Serum albumin-like |Serum albumin-like |Serum albumin-like |Serum albumin |Human (Homo sapiens) [TaxId: 9606]
 d1l5va_ :   (GLY642)  (LYS667)   [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Maltodextrin phosphorylase (MALP) |Escherichia coli [TaxId: 562]
 d3mu6a_ :    (ASP13)   (ASP40)   [view usage] : d.88.1.1 |SRF-like |SRF-like |SRF-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1snya_ :   (ARG104)  (VAL117)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Carbonyl reductase sniffer |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d1bwfo1 :    (ASP48)   (ALA67)   [view usage] : c.55.1.4 |Ribonuclease H-like motif |Actin-like ATPase domain |Glycerol kinase |Glycerol kinase |Escherichia coli [TaxId: 562]
 d4lera_ :    (SER40)   (LYS63)   [view usage] : a.118.8.0 |alpha-alpha superhelix |TPR-like |automated matches |automated matches |Bacteroides vulgatus [TaxId: 435590]
 d1maia_ :   (PRO115)  (HIS130)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Phospholipase C delta-1 |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1e3pa6 :   (THR221)  (LYS249)   [view usage] : d.101.1.1 |Ribonuclease PH domain 2-like |Ribonuclease PH domain 2-like |Ribonuclease PH domain 2-like |Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5 |Streptomyces antibioticus [TaxId: 1890]
 d1wtea_ :    (GLY71)   (GLY86)   [view usage] : c.52.1.29 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease EcoO109IR |Restriction endonuclease EcoO109IR |Escherichia coli [TaxId: 562]
 d1aiaa_ :   (ASP313)  (LYS344)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
 d1a4ya_ :   (ASP240)  (HIS252)   [view usage] : c.10.1.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |28-residue LRR |Ribonuclease inhibitor |Human (Homo sapiens) [TaxId: 9606]
 d1zwva_ :    (THR11)   (LYS48)   [view usage] : a.9.1.0 |Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex |Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2hp6a_ :    (ALA66)   (GLY81)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |Class D beta-lactamase |Pseudomonas aeruginosa, OXA-10 [TaxId: 287]
 d2axva2 :    (THR75)   (ASN88)   [view usage] : a.118.8.4 |alpha-alpha superhelix |TPR-like |PrgX C-terminal domain-like |automated matches |Enterococcus faecalis [TaxId: 1351]
 d3qapa_ :   (THR189)  (LEU219)   [view usage] : f.13.1.1 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |Bacteriorhodopsin-like |Sensory rhodopsin II |Natronobacterium pharaonis [TaxId: 2257]
 d1doab_ :     (ALA8)   (VAL25)   [view usage] : b.1.18.8 |Immunoglobulin-like beta-sandwich |E set domains |RhoGDI-like |Rho GDP-dissociation inhibitor 1, RhoGDI |Cow (Bos taurus) [TaxId: 9913]
 d2jifb1 :   (THR155)  (THR168)   [view usage] : e.6.1.0 |Acyl-CoA dehydrogenase NM domain-like |Acyl-CoA dehydrogenase NM domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1gaka_ :     (SER7)   (ARG37)   [view usage] : a.19.1.1 |Fertilization protein |Fertilization protein |Fertilization protein |SP18 |Green abalone (Haliotis fulgens) [TaxId: 6456]
 d1jb0b_ :   (SER707)  (LYS738)   [view usage] : f.29.1.1 |Photosystem I subunits PsaA/PsaB |Photosystem I subunits PsaA/PsaB |Photosystem I subunits PsaA/PsaB |Apoprotein a2, PsaB |Synechococcus elongatus [TaxId: 32046]
 d2vk9a1 :    (LEU70)   (THR94)   [view usage] : c.68.1.22 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |Glycosylating toxin catalytic domain-like |Alpha-toxin |Clostridium novyi [TaxId: 1542]
 d4fzwb_ :    (LEU73)   (PHE91)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3kcnb_ :   (MSE112)  (LYS137)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Rhodopirellula baltica [TaxId: 265606]
 d1zl0a2 :   (PRO148)  (GLY167)   [view usage] : c.23.16.7 |Flavodoxin-like |Class I glutamine amidotransferase-like |LD-carboxypeptidase A N-terminal domain-like |LD-carboxypeptidase A, N-terminal domain |Pseudomonas aeruginosa [TaxId: 287]
 d2bwob_ :     (TYR3)   (GLY18)   [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |automated matches |Rhodobacter capsulatus [TaxId: 1061]
 d2oqya2 :   (TRP200)  (THR239)   [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Oceanobacillus iheyensis [TaxId: 182710]
 d1lrwb_ :    (ASP33)   (GLY62)   [view usage] : a.137.2.1 |Non-globular all-alpha subunits of globular proteins |Methanol dehydrogenase subunit |Methanol dehydrogenase subunit |Methanol dehydrogenase, light chain |Paracoccus denitrificans [TaxId: 266]
 d2lbda_ :   (LEU182)  (PRO202)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Retinoic acid receptor gamma (RAR-gamma) |Human (Homo sapiens) [TaxId: 9606]
 d1f7ua3 :   (PRO116)  (THR129)   [view usage] : d.67.2.1 |RRF/tRNA synthetase additional domain-like |Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3o2la_ :   (PRO292)  (SER305)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Thermoascus aurantiacus [TaxId: 5087]
 d3rnda_ :   (ASP125)  (ASN155)   [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Old yellow enzyme (OYE) |Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]
 d2a4va1 :   (SER193)  (PHE212)   [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Peroxiredoxin dot5 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d4k7ya_ :   (ASP125)  (ASN155)   [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Old yellow enzyme (OYE) |Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]
 d2ei4a_ :    (ALA86)  (ALA106)   [view usage] : f.13.1.1 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |Bacteriorhodopsin-like |automated matches |Halobacterium sp. [TaxId: 29285]
 d1j57a_ :     (HIS4)   (ASP25)   [view usage] : d.221.1.1 |Nuclease A inhibitor (NuiA) |Nuclease A inhibitor (NuiA) |Nuclease A inhibitor (NuiA) |Nuclease A inhibitor (NuiA) |Nostoc sp. PCC 7120 [TaxId: 103690]
 d2g5cb1 :   (SER201)  (HIS229)   [view usage] : a.100.1.12 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |TyrA dimerization domain-like |Prephenate dehydrogenase TyrA |Aquifex aeolicus [TaxId: 63363]
 d1vp2a_ :   (ILE166)  (ILE190)   [view usage] : c.51.4.1 |Anticodon-binding domain-like |ITPase-like |ITPase (Ham1) |Putative inosine/xanthosine triphosphate pyrophosphatase TM0159 |Thermotoga maritima [TaxId: 2336]
 d4tx6b_ :   (CYS100)  (GLY114)   [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Aspergillus fumigatus [TaxId: 451804]
 d3bs8a_ :   (ASP376)  (GLY391)   [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |automated matches |Bacillus subtilis [TaxId: 1423]
 d4huta_ :     (TYR6)   (ALA24)   [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |automated matches |Salmonella enterica [TaxId: 99287]
 d2ffia1 :   (SER261)  (PHE277)   [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |Putative 2-pyrone-4,6-dicarboxylic acid hydrolase PP1699 |Pseudomonas putida [TaxId: 303]
 d1e3ha5 :   (THR221)  (ALA250)   [view usage] : d.101.1.1 |Ribonuclease PH domain 2-like |Ribonuclease PH domain 2-like |Ribonuclease PH domain 2-like |Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5 |Streptomyces antibioticus [TaxId: 1890]
 d1l3sa2 :   (GLN470)  (GLY492)   [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |DNA polymerase I (Klenow fragment) |Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId: 1422]
 d3lbda_ :   (SER183)  (PRO202)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Retinoic acid receptor gamma (RAR-gamma) |Human (Homo sapiens) [TaxId: 9606]
 d2bwod_ :     (TYR3)   (GLY18)   [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |automated matches |Rhodobacter capsulatus [TaxId: 1061]
 d4jjzb_ :   (GLY305)  (GLY322)   [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |automated matches |Moorella thermoacetica [TaxId: 1525]
 d1lnub2 :    (LEU94)  (ARG120)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Mouse (Mus musculus), I-AB [TaxId: 10090]
 d1vkeb_ :    (ILE96)  (GLY116)   [view usage] : a.152.1.2 |AhpD-like |AhpD-like |CMD-like |Hypothetical protein TM1620 |Thermotoga maritima [TaxId: 2336]
 d2cpba_ :     (ASP5)   (PHE45)   [view usage] : h.1.4.1 |Parallel coiled-coil |Inovirus (filamentous phage) major coat protein |Inovirus (filamentous phage) major coat protein |Inovirus (filamentous phage) major coat protein |Bacteriophage M13 [TaxId: 10870]
 d2nnab2 :    (LEU68)   (THR89)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Human (Homo sapiens), HLA-DR2 [TaxId: 9606]
 d1idua_ :   (TRP497)  (GLY567)   [view usage] : a.111.1.3 |Acid phosphatase/Vanadium-dependent haloperoxidase |Acid phosphatase/Vanadium-dependent haloperoxidase |Chloroperoxidase |Chloroperoxidase |Curvularia inaequalis [TaxId: 38902]
 d3e2ya_ :   (ASP395)  (LYS407)   [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d2llsa_ :    (PHE71)   (GLU91)   [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4fzwa_ :    (LEU73)   (PHE91)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d2bd0a1 :   (THR106)  (GLN135)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Bacterial sepiapterin reductase |Chlorobium tepidum [TaxId: 1097]
 d4i1qb_ :   (LEU195)  (LEU238)   [view usage] : a.238.1.0 |BAR/IMD domain-like |BAR/IMD domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1uptd_ :  (PHE2175) (GLY2188)   [view usage] : a.193.1.1 |GRIP domain |GRIP domain |GRIP domain |Golgi autoantigen, golgin-245 |Human (Homo sapiens) [TaxId: 9606]
 d1hr6a2 :   (ILE273)  (TYR310)   [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Mitochondrial processing peptidase (MPP) alpha chain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1zl0b2 :   (PRO148)  (GLY167)   [view usage] : c.23.16.7 |Flavodoxin-like |Class I glutamine amidotransferase-like |LD-carboxypeptidase A N-terminal domain-like |LD-carboxypeptidase A, N-terminal domain |Pseudomonas aeruginosa [TaxId: 287]
 d3nkcb_ :     (MET1)   (VAL24)   [view usage] : f.19.1.1 |Aquaporin-like |Aquaporin-like |Aquaporin-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1d9da1 :   (LEU491)  (LYS518)   [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of prokaryotic DNA polymerase |Escherichia coli [TaxId: 562]
 d3nkca_ :     (MET1)   (VAL24)   [view usage] : f.19.1.1 |Aquaporin-like |Aquaporin-like |Aquaporin-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1p8cc_ :     (GLU2)   (SER19)   [view usage] : a.152.1.2 |AhpD-like |AhpD-like |CMD-like |Hypothetical protein TM1620 |Thermotoga maritima [TaxId: 2336]
 d1a69a_ :   (THR213)  (LYS237)   [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Purine nucleoside phosphorylase, PNP |Escherichia coli [TaxId: 562]
 d2hrga3 :   (GLN479)  (LEU491)   [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Funalia trogii [TaxId: 76130]
 d1dvjc_ :   (PRO231)  (ALA244)   [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) |Methanobacterium thermoautotrophicum [TaxId: 145262]
 d2auna1 :   (GLN152)  (GLY167)   [view usage] : c.8.10.1 |The "swivelling" beta/beta/alpha domain |LD-carboxypeptidase A C-terminal domain-like |LD-carboxypeptidase A C-terminal domain-like |LD-carboxypeptidase A, C-terminal domain |Pseudomonas aeruginosa [TaxId: 287]
 d3lxja_ :   (MET952)  (ASP977)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4gnza_ :   (TYR515)  (CYS537)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1iaob2 :    (LEU68)   (ARG93)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC beta chain, N-terminal domain |Mouse (Mus musculus), I-AD [TaxId: 10090]
 d2pjsb_ :    (GLU14)   (GLY27)   [view usage] : d.32.1.2 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Antibiotic resistance proteins |Uncharacterized protein Atu1953 |Agrobacterium tumefaciens [TaxId: 358]
 d1yeyc1 :   (HIS415)  (ALA435)   [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |RTS beta protein |Xanthomonas campestris pv. campestris [TaxId: 340]
 d4gwea_ :   (ASP125)  (ASN155)   [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Old yellow enzyme (OYE) |Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]
 d3d3ra1 :    (ARG58)   (LYS74)   [view usage] : b.40.14.1 |OB-fold |HupF/HypC-like |HupF/HypC-like |Hydrogenase expression/formation protein HypC |Shewanella oneidensis [TaxId: 70863]
 d1xwga1 :    (ASP85)  (CYS112)   [view usage] : a.45.1.1 |GST C-terminal domain-like |GST C-terminal domain-like |Glutathione S-transferase (GST), C-terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1kb6b_ :   (THR296)  (ARG321)   [view usage] : g.39.1.2 |Glucocorticoid receptor-like (DNA-binding domain) |Glucocorticoid receptor-like (DNA-binding domain) |Nuclear receptor |Vitamin D3 receptor, VDR, DNA-binding domain |Human (Homo sapiens) [TaxId: 9606]
 d2zt9b_ :    (TRP32)   (PRO59)   [view usage] : f.32.1.1 |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |automated matches |Nostoc sp. [TaxId: 103690]
 d1ik9b2 :   (PRO119)  (ASN200)   [view usage] : h.1.11.1 |Parallel coiled-coil |XRCC4, C-terminal oligomerization domain |XRCC4, C-terminal oligomerization domain |XRCC4, C-terminal oligomerization domain |Human (Homo sapiens) [TaxId: 9606]
 d1i37a_ :   (PRO892)  (GLY909)   [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Androgen receptor |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4b6ga_ :   (GLN109)  (LEU122)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Neisseria meningitidis [TaxId: 122586]
 d4nzpa1 :    (LEU68)   (ARG82)   [view usage] : c.26.2.0 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
 d2pjsa1 :    (GLU14)   (GLY27)   [view usage] : d.32.1.2 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Antibiotic resistance proteins |Uncharacterized protein Atu1953 |Agrobacterium tumefaciens [TaxId: 358]
 d2j7aa_ :   (ASP179)  (HIS191)   [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |automated matches |Desulfovibrio vulgaris [TaxId: 882]
 d1pyya4 :   (SER504)  (TYR528)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |Penicillin-binding protein 2x (pbp-2x), transpeptidase domain |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
 d1wc0b_ :  (ARG1081) (GLY1104)   [view usage] : d.58.29.1 |Ferredoxin-like |Nucleotide cyclase |Adenylyl and guanylyl cyclase catalytic domain |Adenylate cyclase CyaC |Spirulina platensis [TaxId: 118562]
 d2vcta2 :    (ASP85)  (THR112)   [view usage] : a.45.1.1 |GST C-terminal domain-like |GST C-terminal domain-like |Glutathione S-transferase (GST), C-terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3ewjb_ :   (SER451)  (SER464)   [view usage] : d.92.1.10 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |TNF-alpha converting enzyme, TACE, catalytic domain |TNF-alpha converting enzyme, TACE, catalytic domain |Human (Homo sapiens) [TaxId: 9606]
 d3srxb_ :    (THR94)  (ASN110)   [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
 d4j2ea2 :   (ARG581)  (GLY610)   [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
 d1cwva5 :   (GLU917)  (TRP936)   [view usage] : d.169.1.3 |C-type lectin-like |C-type lectin-like |Invasin/intimin cell-adhesion fragment, C-terminal domain |Invasin |Yersinia pseudotuberculosis [TaxId: 633]
 d2jnwa1 :   (SER201)  (ALA214)   [view usage] : c.52.1.20 |Restriction endonuclease-like |Restriction endonuclease-like |XPF/Rad1/Mus81 nuclease |DNA excision repair protein ERCC-1 |Human (Homo sapiens) [TaxId: 9606]
 d1g65g_ :     (ALA6)   (THR31)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome alpha subunit (non-catalytic) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1k5da_ :   (PRO191)  (THR207)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Ran |Human (Homo sapiens) [TaxId: 9606]
 d2vsuf_ :   (THR230)  (LEU248)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d2v4mb_ :   (VAL659)  (GLY683)   [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2gi4a_ :    (GLY44)   (GLN61)   [view usage] : c.44.1.0 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |automated matches |automated matches |Campylobacter jejuni [TaxId: 197]
 d3i69a2 :    (ASP85)  (MET108)   [view usage] : a.45.1.1 |GST C-terminal domain-like |GST C-terminal domain-like |Glutathione S-transferase (GST), C-terminal domain |Class alpha GST |Human (Homo sapiens), (a1-1) [TaxId: 9606]
 d1su6a_ :   (LEU590)  (GLY605)   [view usage] : e.26.1.2 |Prismane protein-like |Prismane protein-like |Carbon monoxide dehydrogenase |Ni-containing carbon monoxide dehydrogenase |Carboxydothermus hydrogenoformans [TaxId: 129958]
 d1x1fa1 :   (GLY106)  (ILE142)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Signal-transducing adaptor protein 1, STAP-1 |Human (Homo sapiens) [TaxId: 9606]
 d3kuud_ :   (THR147)  (PRO168)   [view usage] : c.23.8.1 |Flavodoxin-like |N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) |N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) |automated matches |Yersinia pestis [TaxId: 632]
 d3hj5b_ :   (ASN171)  (THR190)   [view usage] : d.6.1.1 |Prion-like |Prion-like |Prion-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1rjfb_ :     (ASP9)   (GLY23)   [view usage] : c.66.1.37 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Leucine carboxy methyltransferase Ppm1 |Leucine carboxy methyltransferase Ppm1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d4e3ya_ :  (LYS1115) (LEU1133)   [view usage] : d.4.1.2 |His-Me finger endonucleases |His-Me finger endonucleases |DNA/RNA non-specific endonuclease |Sm endonuclease |Serratia marcescens [TaxId: 615]
 d3ruza_ :    (MET98)  (GLU135)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d3ziza_ :   (SER331)  (LEU348)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Podospora anserina [TaxId: 5145]
 d2zkrj1 :    (ARG48)   (THR63)   [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Dog (Canis familiaris) [TaxId: 9615]
 d2bc4a1 :    (ALA69)   (ASP91)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4bvhb_ :   (SER159)  (ASP172)   [view usage] : c.31.1.0 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1kqlb_ :   (ASP230)  (THR282)   [view usage] : h.1.5.1 |Parallel coiled-coil |Tropomyosin |Tropomyosin |Tropomyosin |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1rjfc_ :     (ASP9)   (GLY23)   [view usage] : c.66.1.37 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Leucine carboxy methyltransferase Ppm1 |Leucine carboxy methyltransferase Ppm1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d4cbua2 :   (PHE353)  (SER366)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |automated matches |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
 d1urda_ :   (ASN234)  (LYS264)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Alicyclobacillus acidocaldarius [TaxId: 405212]
 d1nsha_ :    (ASP72)   (ALA95)   [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |Calcyclin (S100) |Rabbit (Oryctolagus cuniculus), calgizzarin s100a11 [TaxId: 9986]
 d1qmga1 :   (TRP528)  (GLY547)   [view usage] : a.100.1.2 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |Acetohydroxy acid isomeroreductase (ketol-acid reductoisomerase, KARI) |Class II ketol-acid reductoisomerase |Spinach (Spinacia oleracea) [TaxId: 3562]
 d1oyaa_ :   (ASP125)  (ASN155)   [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Old yellow enzyme (OYE) |Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]
 d3v98a2 :   (SER531)  (ASN554)   [view usage] : a.119.1.0 |Lipoxigenase |Lipoxigenase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1zgaa1 :     (SER8)   (GLY40)   [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Medicago truncatula [TaxId: 3880]
 d3gz4a_ :   (PRO112)  (LEU133)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Escherichia coli [TaxId: 217992]
 d2wmea_ :    (SER42)   (MET63)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d2dcna1 :   (SER171)  (LYS185)   [view usage] : c.72.1.1 |Ribokinase-like |Ribokinase-like |Ribokinase-like |Hypothetical fructokinase ST2478 |Sulfolobus tokodaii [TaxId: 111955]
 d1bccg_ :    (HIS28)   (ALA43)   [view usage] : f.23.13.1 |Single transmembrane helix |Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Chicken (Gallus gallus) [TaxId: 9031]
 d1bccg_ :    (PRO50)   (VAL78)   [view usage] : f.23.13.1 |Single transmembrane helix |Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Chicken (Gallus gallus) [TaxId: 9031]
 d4h4ia_ :   (ASP125)  (ASN155)   [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Old yellow enzyme (OYE) |Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]
 d1hr6c2 :   (ILE273)  (TYR310)   [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Mitochondrial processing peptidase (MPP) alpha chain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2zata_ :   (GLU113)  (VAL134)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Pig (Sus scrofa) [TaxId: 9823]
 d2gyqb_ :   (HIS133)  (VAL157)   [view usage] : a.25.1.4 |Ferritin-like |Ferritin-like |YciF-like |Hypothetical ptotein RPA3308 |Rhodopseudomonas palustris [TaxId: 1076]
 d2r5na2 :     (SER3)   (LYS23)   [view usage] : c.36.1.10 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |TK-like PP module |Transketolase (TK), PP module |Escherichia coli [TaxId: 562]
 d1dvpa2 :   (CYS188)  (GLY220)   [view usage] : g.50.1.1 |FYVE/PHD zinc finger |FYVE/PHD zinc finger |FYVE, a phosphatidylinositol-3-phosphate binding domain |Hrs |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d2auma1 :   (GLN152)  (GLY167)   [view usage] : c.8.10.1 |The "swivelling" beta/beta/alpha domain |LD-carboxypeptidase A C-terminal domain-like |LD-carboxypeptidase A C-terminal domain-like |LD-carboxypeptidase A, C-terminal domain |Pseudomonas aeruginosa [TaxId: 287]
 d1i41a_ :   (LYS165)  (GLY178)   [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |Cystathionine gamma-synthase, CGS |Tobacco (Nicotiana tabacum) [TaxId: 4097]
 d1k02a_ :   (PRO124)  (ASN155)   [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Old yellow enzyme (OYE) |Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]
 d1hvvc_ :   (SER193)  (VAL255)   [view usage] : h.1.15.1 |Parallel coiled-coil |SNARE fusion complex |SNARE fusion complex |Syntaxin 1A |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1hbwa_ :    (THR55)   (PHE68)   [view usage] : h.1.3.1 |Parallel coiled-coil |Leucine zipper domain |Leucine zipper domain |CD2-Gal4 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3sd0b_ :   (THR330)  (ILE376)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Glycogen synthase kinase-3 beta (Gsk3b) |Human (Homo sapiens) [TaxId: 9606]
 d2gtqa2 :   (GLY220)  (GLY238)   [view usage] : d.92.1.13 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Zn aminopeptidase catalytic domain |Aminopeptidase N (APN) catalytic domain |Neisseria meningitidis [TaxId: 122586]
 d1qaea_ :   (LYS115)  (LEU133)   [view usage] : d.4.1.2 |His-Me finger endonucleases |His-Me finger endonucleases |DNA/RNA non-specific endonuclease |Sm endonuclease |Serratia marcescens [TaxId: 615]
 d1w5ca_ :   (PRO196)  (LEU223)   [view usage] : i.5.1.1 |Photosystems |Photosystems |Photosystems |Photosystem II |Thermosynechococcus vulcanus [TaxId: 32053]
 d2r92k1 :    (PRO83)  (TRP109)   [view usage] : i.8.1.1 |RNA polymerase |RNA polymerase |RNA polymerase |Complete 12-subunit RNA polymerase II complex |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d4b6gb_ :   (GLN109)  (LEU122)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Neisseria meningitidis [TaxId: 122586]
 d1w0ma_ :   (TYR212)  (LEU225)   [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Thermoproteus tenax [TaxId: 2271]
 d1j0ma1 :   (SER365)  (ASP378)   [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Xanthan lyase |Bacillus sp. GL1 [TaxId: 84635]
 d3s11d_ :    (ARG75)  (LEU126)   [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |automated matches |Influenza A virus [TaxId: 11320]
 d3o8yb2 :   (SER531)  (ASN554)   [view usage] : a.119.1.0 |Lipoxigenase |Lipoxigenase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4i6ka_ :   (LYS252)  (PHE267)   [view usage] : c.1.9.0 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |automated matches |automated matches |Acinetobacter baumannii [TaxId: 480119]
 d3hd5a_ :   (ASP192)  (GLU209)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Bordetella parapertussis [TaxId: 519]
 d2yz7a_ :   (PRO103)  (ALA125)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Alcaligenes faecalis [TaxId: 511]
 d3a2fa2 :   (GLU509)  (GLY534)   [view usage] : e.8.1.0 |DNA/RNA polymerases |DNA/RNA polymerases |automated matches |automated matches |Pyrococcus furiosus [TaxId: 2261]
 d2ff2a_ :    (PRO80)   (MET93)   [view usage] : c.70.1.1 |Nucleoside hydrolase |Nucleoside hydrolase |Nucleoside hydrolase |automated matches |Trypanosoma vivax [TaxId: 5699]
 d1tlba_ :    (LEU10)   (SER33)   [view usage] : d.248.1.1 |Coproporphyrinogen III oxidase |Coproporphyrinogen III oxidase |Coproporphyrinogen III oxidase |Coproporphyrinogen III oxidase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3ge6a_ :   (PRO110)  (VAL128)   [view usage] : d.90.1.0 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |automated matches |automated matches |Exiguobacterium sibiricum [TaxId: 262543]
 d4gxma_ :   (ASP125)  (ASN155)   [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Old yellow enzyme (OYE) |Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]
 d1zgja1 :    (LEU13)   (GLY40)   [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Medicago truncatula [TaxId: 3880]
 d1yeyb1 :   (HIS415)  (GLU432)   [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |RTS beta protein |Xanthomonas campestris pv. campestris [TaxId: 340]
 d2ffib_ :   (SER261)  (PHE277)   [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |Putative 2-pyrone-4,6-dicarboxylic acid hydrolase PP1699 |Pseudomonas putida [TaxId: 303]
 d2fefb2 :   (ALA257)  (ASP293)   [view usage] : a.254.1.1 |PA2201 C-terminal domain-like |PA2201 C-terminal domain-like |PA2201 C-terminal domain-like |Hypothetical protein PA2201 |Pseudomonas aeruginosa [TaxId: 287]
 d1a4ua_ :   (ILE100)  (GLY127)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Drosophila alcohol dehydrogenase |Fly (Drosophila lebanonensis) [TaxId: 7225]
 d3i69b2 :    (ASP85)  (CYS112)   [view usage] : a.45.1.1 |GST C-terminal domain-like |GST C-terminal domain-like |Glutathione S-transferase (GST), C-terminal domain |Class alpha GST |Human (Homo sapiens), (a1-1) [TaxId: 9606]
 d4cqvb_ :    (ARG75)  (LEU126)   [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |automated matches |Influenza a virus (a/turkey/turkey/1/2005(h5n1)) [TaxId: 375457]
 d1bwka_ :   (ASP125)  (ASN155)   [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Old yellow enzyme (OYE) |Yeast (Candida albicans) [TaxId: 5476]
 d1jaxa_ :   (SER185)  (GLY203)   [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Coenzyme F420H2:NADP+ oxidoreductase (FNO) |Archaeoglobus fulgidus [TaxId: 2234]
 d3u6va2 :    (ASP85)  (CYS112)   [view usage] : a.45.1.1 |GST C-terminal domain-like |GST C-terminal domain-like |Glutathione S-transferase (GST), C-terminal domain |Class alpha GST |Human (Homo sapiens), (a1-1) [TaxId: 9606]
 d3ckia_ :   (SER451)  (SER464)   [view usage] : d.92.1.10 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |TNF-alpha converting enzyme, TACE, catalytic domain |TNF-alpha converting enzyme, TACE, catalytic domain |Human (Homo sapiens) [TaxId: 9606]
 d2ba2b_ :   (THR110)  (GLU184)   [view usage] : h.1.30.1 |Parallel coiled-coil |MPN010-like |MPN010-like |Hypothetical protein MPN010 |Mycoplasma pneumoniae [TaxId: 2104]
 d1f6wa_ :   (ARG515)  (LEU529)   [view usage] : c.69.1.1 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetylcholinesterase-like |Bile-salt activated lipase (cholesterol esterase) |Human (Homo sapiens) [TaxId: 9606]
 d2bwpb_ :     (ASN4)   (GLY18)   [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |automated matches |Rhodobacter capsulatus [TaxId: 1061]
 d2fefc2 :   (ALA257)  (ASP293)   [view usage] : a.254.1.1 |PA2201 C-terminal domain-like |PA2201 C-terminal domain-like |PA2201 C-terminal domain-like |Hypothetical protein PA2201 |Pseudomonas aeruginosa [TaxId: 287]
 d4gvta_ :   (THR172)  (GLN200)   [view usage] : a.224.1.1 |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Human (Homo sapiens) [TaxId: 9606]
 d4im7a1 :   (HIS143)  (GLY174)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Escherichia coli [TaxId: 199310]
 d1rq8a_ :     (THR3)   (ASN16)   [view usage] : d.68.4.1 |IF3-like |YhbY-like |YhbY-like |Hypothetical protein SAV1595 |Staphylococcus aureus, (strain Mu50 / ATCC 700699) [TaxId: 1280]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   e.8,     e.3,     c.1,    c.10,   a.119,    c.67,    c.69,    c.94,    d.68,     c.2,    d.58,     i.1,   a.118,    c.68,    c.82,    c.26,    c.56,   d.157,   a.102,    c.66,  
c.80, d.92, c.14, a.93, e.18, c.72, c.23, d.144, b.40, c.37, c.36, c.47, d.185, c.55, e.6, d.153, d.169, c.87, i.5, d.248,
c.31, c.85, b.6, d.32, b.1, a.123, a.126, a.25, c.8, c.51, d.19, b.55, c.52, a.152, a.100, a.4, d.67, d.90, f.13, a.39,
h.3, a.138, e.26, a.45, a.224, a.29, a.91, f.19, a.111, i.8, d.4, d.6, c.44, c.70, d.101, f.29, f.23, a.2, a.19, g.39,
d.88, a.238, h.1, a.254, f.32, a.193, g.50, d.221, a.9, a.137