Tableau information
Concept source: d3uvjd_ amino acid (a.a.) range (PHE430)(ASP462)
nSSEs in this Concept: 2
String of secondary struct.elems. (SSEs) defining this concept: HH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PHE430) (LYS436) H1
(SER439) (ASP462) H2
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 144.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.3° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4iuga5 : (GLY851) (GLY864) [view usage] : b.18.1.0 |Galactose-binding domain-like |Galactose-binding domain-like |automated matches |automated matches |Fungus (Aspergillus oryzae) [TaxId: 5062]
d1u5wf_ : (PRO110) (THR131) [view usage] : c.51.4.3 |Anticodon-binding domain-like |ITPase-like |YjjX-like |Hypothetical protein YjjX |Escherichia coli [TaxId: 562]
d1a7ma_ : (LEU22) (CYS60) [view usage] : a.26.1.1 |4-helical cytokines |4-helical cytokines |Long-chain cytokines |Leukemia inhibitory factor (LIF) |Mouse (Mus musculus) [TaxId: 10090]
d2xzm7_ : (ASN69) (VAL87) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Tetrahymena thermophila [TaxId: 5911]
d2gcba2 : (GLY258) (SER295) [view usage] : c.72.2.2 |Ribokinase-like |MurD-like peptide ligases, catalytic domain |Folylpolyglutamate synthetase |Folylpolyglutamate synthetase |Lactobacillus casei [TaxId: 1582]
d1pi1a_ : (LEU20) (ILE54) [view usage] : a.29.7.1 |Bromodomain-like |Mob1/phocein |Mob1/phocein |Mob1a |Human (Homo sapiens) [TaxId: 9606]
d1ww9a1 : (GLU6) (ALA21) [view usage] : b.33.1.2 |ISP domain |ISP domain |Ring hydroxylating alpha subunit ISP domain |Terminal oxygenase component of carbazole CarAa |Janthinobacterium sp. J3 [TaxId: 213804]
d1kppa_ : (SER4) (LYS33) [view usage] : d.20.1.2 |UBC-like |UBC-like |UEV domain |Tumor susceptibility gene 101 (TSG101) |Human (Homo sapiens) [TaxId: 9606]
d3n0sa_ : (TRP80) (ASN96) [view usage] : c.140.1.0 |TTHA0583/YokD-like |TTHA0583/YokD-like |automated matches |automated matches |Bacillus anthracis [TaxId: 198094]
d1i00a_ : (PHE80) (SER103) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Human (Homo sapiens) [TaxId: 9606]
d3w7va_ : (SER29) (ALA47) [view usage] : c.23.10.0 |Flavodoxin-like |SGNH hydrolase |automated matches |automated matches |Geobacillus stearothermophilus [TaxId: 1422]
d1ojhk_ : (SER8) (TRP56) [view usage] : a.214.1.1 |NblA-like |NblA-like |NblA-like |Phycobilisome degradation protein NblA |Nostoc sp. PCC 7120 [TaxId: 103690]
d3hn6b_ : (ASP240) (ASN265) [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Borrelia burgdorferi [TaxId: 224326]
d1v15b_ : (ASP64) (GLY82) [view usage] : d.4.1.1 |His-Me finger endonucleases |His-Me finger endonucleases |HNH-motif |DNase domain of colicin E9 |Escherichia coli [TaxId: 562]
d1xpaa1 : (THR140) (ARG158) [view usage] : a.6.1.2 |Putative DNA-binding domain |Putative DNA-binding domain |DNA repair factor XPA DNA- and RPA-binding domain, C-terminal subdomain |DNA repair factor XPA DNA- and RPA-binding domain, C-terminal subdomain |Human (Homo sapiens) [TaxId: 9606]
d3fwxa_ : (LEU142) (LYS163) [view usage] : d.167.1.1 |Peptide deformylase |Peptide deformylase |Peptide deformylase |automated matches |Vibrio cholerae [TaxId: 345073]
d1iq8a4 : (ILE437) (PHE456) [view usage] : d.17.6.1 |Cystatin-like |Pre-PUA domain |Archaeosine tRNA-guanine transglycosylase, C2 domain |Archaeosine tRNA-guanine transglycosylase, C2 domain |Pyrococcus horikoshii [TaxId: 53953]
d2df7b_ : (GLY393) (VAL429) [view usage] : b.121.4.9 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Birnaviridae-like VP |automated matches |Infectious bursal disease virus [TaxId: 10995]
d1ynya2 : (GLY187) (PRO213) [view usage] : c.1.9.6 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Hydantoinase (dihydropyrimidinase), catalytic domain |D-hydantoinase |Bacillus sp. AR9 [TaxId: 301298]
d3r6ua_ : (THR251) (HIS279) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Bacillus subtilis [TaxId: 535025]
d2bskf1 : (LEU13) (SER73) [view usage] : g.83.1.1 |Tim10-like |Tim10-like |Tim10/DDP |Mitochondrial import inner membrane translocase subunit Tim10 |Human (Homo sapiens) [TaxId: 9606]
d3h1aa_ : (GLY3) (ALA37) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Uncultured bacterium [TaxId: 77133]
d2ouvb_ : (GLU695) (GLU721) [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ix1a_ : (LEU143) (HIS170) [view usage] : d.167.1.1 |Peptide deformylase |Peptide deformylase |Peptide deformylase |Peptide deformylase |Pseudomonas aeruginosa [TaxId: 287]
d1xg2b_ : (LEU4) (ASP25) [view usage] : a.29.6.0 |Bromodomain-like |Plant invertase/pectin methylesterase inhibitor |automated matches |automated matches |Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]
d2wrba2 : (ARG404) (GLY484) [view usage] : h.3.1.0 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |automated matches |automated matches |Influenza A virus [TaxId: 11320]
d1eqnb_ : (ASP166) (GLY186) [view usage] : e.13.1.1 |DNA primase core |DNA primase core |DNA primase DnaG catalytic core |DNA primase DnaG catalytic core |Escherichia coli [TaxId: 562]
d1iola_ : (LEU260) (VAL283) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Human estrogenic 17beta-hydroxysteroid dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
d2w3ta_ : (LEU141) (LYS165) [view usage] : d.167.1.0 |Peptide deformylase |Peptide deformylase |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1bs4a_ : (LEU141) (ALA166) [view usage] : d.167.1.1 |Peptide deformylase |Peptide deformylase |Peptide deformylase |Peptide deformylase |Escherichia coli [TaxId: 562]
d1af0a1 : (PHE406) (HIS418) [view usage] : b.80.7.1 |Single-stranded right-handed beta-helix |beta-Roll |Serralysin-like metalloprotease, C-terminal domain |Metalloprotease |Serratia marcescens [TaxId: 615]
d1tg7a3 : (GLY854) (GLY867) [view usage] : b.18.1.27 |Galactose-binding domain-like |Galactose-binding domain-like |Beta-galactosidase LacA, domains 4 and 5 |Beta-galactosidase LacA, domains 4 and 5 |Penicillium sp. [TaxId: 5081]
d2afin_ : (MET58) (LEU76) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Nitrogenase iron protein |Azotobacter vinelandii [TaxId: 354]
d2ousb_ : (ALA694) (GLU721) [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1d2ra_ : (VAL40) (VAL68) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Tryptophanyl-tRNA synthetase (TrpRS) |Bacillus stearothermophilus [TaxId: 1422]
d1yv0t1 : (LEU164) (ALA244) [view usage] : h.1.25.1 |Parallel coiled-coil |Troponin coil-coiled subunits |Troponin T |Troponin T |Chicken (Gallus gallus) [TaxId: 9031]
d4lm1b_ : (ALA694) (GLU721) [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ytzt1 : (SER162) (GLN245) [view usage] : h.1.25.1 |Parallel coiled-coil |Troponin coil-coiled subunits |Troponin T |Troponin T |Chicken (Gallus gallus) [TaxId: 9031]
d3us6a_ : (GLU2) (ASP35) [view usage] : a.24.10.0 |Four-helical up-and-down bundle |Histidine-containing phosphotransfer domain, HPT domain |automated matches |automated matches |Medicago truncatula [TaxId: 3880]
d1p4ca_ : (VAL8) (LEU27) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Membrane-associated (S)-mandelate dehydrogenase |Pseudomonas putida [TaxId: 303]
d2bcqa1 : (SER295) (GLY320) [view usage] : a.60.6.1 |SAM domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase lambda |Human (Homo sapiens) [TaxId: 9606]
d1srpa1 : (PHE406) (HIS418) [view usage] : b.80.7.1 |Single-stranded right-handed beta-helix |beta-Roll |Serralysin-like metalloprotease, C-terminal domain |Metalloprotease |Serratia marcescens [TaxId: 615]
d2yivx_ : (VAL492) (GLY512) [view usage] : e.26.1.2 |Prismane protein-like |Prismane protein-like |Carbon monoxide dehydrogenase |Ni-containing carbon monoxide dehydrogenase |Carboxydothermus hydrogenoformans [TaxId: 129958]
d1joga_ : (LYS81) (THR109) [view usage] : a.24.16.2 |Four-helical up-and-down bundle |Nucleotidyltransferase substrate binding subunit/domain |Family 1 bi-partite nucleotidyltransferase subunit |Hypothetical protein HI0074 |Haemophilus influenzae [TaxId: 727]
d3hn6a_ : (ASP240) (ASN264) [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Borrelia burgdorferi [TaxId: 224326]
d2gcaa2 : (GLY258) (SER295) [view usage] : c.72.2.2 |Ribokinase-like |MurD-like peptide ligases, catalytic domain |Folylpolyglutamate synthetase |Folylpolyglutamate synthetase |Lactobacillus casei [TaxId: 1582]
d3lxib_ : (VAL101) (THR111) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Novosphingobium aromaticivorans [TaxId: 279238]
d3k92a1 : (ASP9) (MET42) [view usage] : c.58.1.0 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d2afkh_ : (ILE57) (LEU76) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Nitrogenase iron protein |Azotobacter vinelandii [TaxId: 354]
d3hl0a_ : (GLY310) (GLY347) [view usage] : e.22.1.0 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
d4eukb_ : (LEU3) (GLN34) [view usage] : a.24.10.0 |Four-helical up-and-down bundle |Histidine-containing phosphotransfer domain, HPT domain |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2gl5a1 : (ASP170) (GLY192) [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |Putative dehydratase protein STM2273 |Salmonella typhimurium [TaxId: 90371]
d3i4ea_ : (LEU349) (GLY388) [view usage] : c.1.12.7 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |Phosphoenolpyruvate mutase/Isocitrate lyase-like |automated matches |Burkholderia pseudomallei [TaxId: 28450]
d1kvya_ : (ALA1) (LEU58) [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Phospholipase A2 |Cow (Bos taurus), pancreas [TaxId: 9913]
d4q0ma_ : (THR291) (LYS318) [view usage] : c.88.1.0 |Glutaminase/Asparaginase |Glutaminase/Asparaginase |automated matches |automated matches |Pyrococcus furiosus [TaxId: 186497]
d1g21f_ : (ILE57) (LEU76) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Nitrogenase iron protein |Azotobacter vinelandii [TaxId: 354]
d2d00b_ : (GLY81) (THR102) [view usage] : c.149.1.1 |AtpF-like |AtpF-like |AtpF-like |automated matches |Thermus thermophilus [TaxId: 274]
d1c53a_ : (ASP2) (GLY18) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Cytochrome c6 (synonym: cytochrome c553) |Desulfovibrio vulgaris, different strains [TaxId: 881]
d3fefa1 : (SER91) (ALA126) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d2ceya_ : (LYS280) (GLU302) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Sialic acid-binding protein SiaP |Haemophilus influenzae [TaxId: 727]
d1g0ta1 : (SER130) (GLY155) [view usage] : c.47.1.9 |Thioredoxin fold |Thioredoxin-like |DsbC/DsbG C-terminal domain-like |Disulfide bond isomerase, DsbC, C-terminal domain |Escherichia coli [TaxId: 562]
d1z82a2 : (SER242) (SER263) [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d1wlsa_ : (THR291) (LYS318) [view usage] : c.88.1.0 |Glutaminase/Asparaginase |Glutaminase/Asparaginase |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 53953]
d3dxra_ : (PHE12) (ALA80) [view usage] : g.83.1.0 |Tim10-like |Tim10-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1g0tb1 : (SER130) (GLY155) [view usage] : c.47.1.9 |Thioredoxin fold |Thioredoxin-like |DsbC/DsbG C-terminal domain-like |Disulfide bond isomerase, DsbC, C-terminal domain |Escherichia coli [TaxId: 562]
d3zzfa_ : (THR67) (SER93) [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3o15a_ : (SER209) (THR233) [view usage] : c.1.3.1 |TIM beta/alpha-barrel |Thiamin phosphate synthase |Thiamin phosphate synthase |Thiamin phosphate synthase |Bacillus subtilis [TaxId: 1423]
d1kcxa2 : (GLY202) (ARG227) [view usage] : c.1.9.6 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Hydantoinase (dihydropyrimidinase), catalytic domain |Dihydropyrimidinase related protein-1 |Mouse (Mus musculus) [TaxId: 10090]
d4o94a_ : (PRO307) (SER327) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 316058]
d1sata1 : (PHE406) (HIS418) [view usage] : b.80.7.1 |Single-stranded right-handed beta-helix |beta-Roll |Serralysin-like metalloprotease, C-terminal domain |Metalloprotease |Serratia marcescens [TaxId: 615]
d2c8va_ : (THR56) (LEU76) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Nitrogenase iron protein |Azotobacter vinelandii [TaxId: 354]
d1sw2a_ : (THR243) (GLY272) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Osmoprotection protein ProX |Archaeoglobus fulgidus [TaxId: 2234]
d2o3la1 : (GLU14) (ASN42) [view usage] : a.69.4.1 |Left-handed superhelix |BH3980-like |BH3980-like |Hypothetical protein BCE3448 |Bacillus cereus [TaxId: 1396]
d1tqyb1 : (PRO61) (LYS87) [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB |Streptomyces coelicolor [TaxId: 1902]
d4knva_ : (THR20) (GLU59) [view usage] : c.108.1.6 |HAD-like |HAD-like |beta-Phosphoglucomutase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3og2a5 : (GLY858) (GLY871) [view usage] : b.18.1.0 |Galactose-binding domain-like |Galactose-binding domain-like |automated matches |automated matches |Trichoderma reesei [TaxId: 51453]
d1kzga1 : (MET686) (ARG718) [view usage] : a.87.1.1 |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |Dbl's big sister, Dbs |Mouse (Mus musculus) [TaxId: 10090]
d3fata_ : (ASN20) (GLU31) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3ro0c_ : (ILE172) (HIS203) [view usage] : c.56.4.1 |Phosphorylase/hydrolase-like |Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) |Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) |Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) |Bacillus amyloliquefaciens [TaxId: 1390]
d1q6ua_ : (ASN18) (ASP64) [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |Peptidyl-prolyl cis-trans isomerase FkpA |Escherichia coli [TaxId: 562]
d1ur0b_ : (LEU333) (PHE364) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Beta-1,4-galactanase |Bacillus licheniformis [TaxId: 1402]
d1vk9a_ : (CYS113) (PHE136) [view usage] : c.97.1.3 |Cytidine deaminase-like |Cytidine deaminase-like |Hypothetical protein TM1506 |Hypothetical protein TM1506 |Thermotoga maritima [TaxId: 2336]
d1o7kb_ : (ALA77) (TYR97) [view usage] : d.189.1.1 |PX domain |PX domain |PX domain |p47phox NADPH oxidase |Human (Homo sapiens) [TaxId: 9606]
d4jjza_ : (GLU410) (LEU420) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |automated matches |Moorella thermoacetica [TaxId: 1525]
d3rnzc_ : (ILE172) (HIS203) [view usage] : c.56.4.1 |Phosphorylase/hydrolase-like |Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) |Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) |Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) |Bacillus amyloliquefaciens [TaxId: 1390]
d2fffb1 : (THR631) (ALA646) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |Penicillin-binding protein 1b, transpeptidase domain |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2ptma_ : (GLU516) (ARG537) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |automated matches |Purple sea urchin (Strongylocentrotus purpuratus) [TaxId: 7668]
d1c4aa3 : (ARG152) (CYS200) [view usage] : d.58.1.5 |Ferredoxin-like |4Fe-4S ferredoxins |Ferredoxin domains from multidomain proteins |Fe-only hydrogenase, second domain |Clostridium pasteurianum [TaxId: 1501]
d1j2za_ : (ARG195) (ARG219) [view usage] : b.81.1.1 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |UDP N-acetylglucosamine acyltransferase |UDP N-acetylglucosamine acyltransferase |Helicobacter pylori [TaxId: 210]
d1sw1a_ : (THR243) (GLY272) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Osmoprotection protein ProX |Archaeoglobus fulgidus [TaxId: 2234]
d3ppoa_ : (ASP270) (HIS299) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d3kpaa_ : (SER4) (ASP49) [view usage] : d.20.1.4 |UBC-like |UBC-like |UFC1-like |automated matches |Leishmania major [TaxId: 5664]
d2joma_ : (HIS186) (ALA228) [view usage] : d.6.1.1 |Prion-like |Prion-like |Prion-like |automated matches |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d3ppna_ : (THR271) (HIS300) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d1su6a_ : (VAL492) (GLY512) [view usage] : e.26.1.2 |Prismane protein-like |Prismane protein-like |Carbon monoxide dehydrogenase |Ni-containing carbon monoxide dehydrogenase |Carboxydothermus hydrogenoformans [TaxId: 129958]
d3ovqb_ : (SER198) (LYS223) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1g50a_ : (THR311) (VAL364) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Estrogen receptor alpha |Human (Homo sapiens) [TaxId: 9606]
d4e6ma2 : (ASP170) (GLY192) [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |Putative dehydratase protein STM2273 |Salmonella enterica [TaxId: 90371]
d4fjva_ : (SER68) (ARG96) [view usage] : d.3.1.11 |Cysteine proteinases |Cysteine proteinases |Ubiquitin thiolesterase protein OTUB2 (Otubain-2) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3u0za_ : (ASP434) (ARG456) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2vrda1 : (LYS29) (PHE57) [view usage] : g.37.1.4 |beta-beta-alpha zinc fingers |beta-beta-alpha zinc fingers |HkH motif-containing C2H2 finger |Spliceosomal protein U1C |Human (Homo sapiens) [TaxId: 9606]
d3kzua1 : (THR217) (ARG228) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Brucella melitensis [TaxId: 29459]
d2dznc_ : (LYS210) (VAL228) [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2io0a1 : (HIS502) (THR530) [view usage] : d.3.1.7 |Cysteine proteinases |Cysteine proteinases |Adenain-like |Sentrin-specific protease 2, SENP2 |Human (Homo sapiens) [TaxId: 9606]
d2ia5g2 : (TRP116) (GLY148) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Polynucleotide kinase, kinase domain |Bacteriophage T4 [TaxId: 10665]
d2d4va_ : (THR259) (GLY286) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Acidithiobacillus thiooxidans [TaxId: 930]
d2kyca_ : (SER7) (GLY34) [view usage] : a.39.1.4 |EF Hand-like |EF-hand |Parvalbumin |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d2ocea5 : (ASP441) (VAL462) [view usage] : c.55.3.13 |Ribonuclease H-like motif |Ribonuclease H-like |Tex RuvX-like domain-like |Transcriptional accessory factor Tex |Pseudomonas aeruginosa [TaxId: 287]
d3s4tb_ : (GLU14) (ASP38) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |automated matches |Polaromonas sp. [TaxId: 296591]
d3ovrb_ : (SER198) (LYS223) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3nmoa_ : (TRP253) (PRO310) [view usage] : f.20.1.1 |Clc chloride channel |Clc chloride channel |Clc chloride channel |automated matches |Escherichia coli [TaxId: 216592]
d4knwb_ : (THR22) (HIS64) [view usage] : c.108.1.6 |HAD-like |HAD-like |beta-Phosphoglucomutase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1rwja_ : (THR50) (CYS76) [view usage] : a.138.1.1 |Multiheme cytochromes |Multiheme cytochromes |Cytochrome c3-like |Cytochrome c7 (cytochrome c551.5, PpcA) |Geobacter sulfurreducens, GSU1996 [TaxId: 35554]
d1ay0a2 : (ASN341) (ASP368) [view usage] : c.36.1.6 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |TK-like Pyr module |Transketolase (TK), Pyr module |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1up4a1 : (LYS85) (ALA116) [view usage] : c.2.1.5 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |LDH N-terminal domain-like |6-phospho-beta-glucosidase |Thermotoga maritima [TaxId: 2336]
d1s17a_ : (LEU143) (GLN167) [view usage] : d.167.1.1 |Peptide deformylase |Peptide deformylase |Peptide deformylase |Peptide deformylase |Pseudomonas aeruginosa [TaxId: 287]
d3slca2 : (ALA338) (ALA364) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Salmonella enterica [TaxId: 90371]
d1n5na_ : (LEU143) (GLN167) [view usage] : d.167.1.1 |Peptide deformylase |Peptide deformylase |Peptide deformylase |Peptide deformylase |Pseudomonas aeruginosa [TaxId: 287]
d2i9va_ : (GLU12) (LEU26) [view usage] : d.110.3.1 |Profilin-like |PYP-like sensor domain (PAS domain) |PYP-like |Photoactive yellow protein, PYP |Methylophilus methylotrophus, strain w3a1 [TaxId: 17]
d3qc3a_ : (SER198) (ARG224) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4sbva_ : (THR201) (ILE218) [view usage] : b.121.4.7 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Tombusviridae-like VP |Sobemovirus coat protein |SBMV (Southern bean mosaic virus), cow pea strain [TaxId: 12139]
d1wpwa_ : (GLY43) (ALA65) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |3-isopropylmalate dehydrogenase, IPMDH |Sulfolobus tokodaii [TaxId: 111955]
d1ffuc1 : (GLU241) (CYS286) [view usage] : d.87.2.1 |CO dehydrogenase flavoprotein C-domain-like |CO dehydrogenase flavoprotein C-terminal domain-like |CO dehydrogenase flavoprotein C-terminal domain-like |Carbon monoxide (CO) dehydrogenase flavoprotein, C-terminal domain |Hydrogenophaga pseudoflava [TaxId: 47421]
d2cexd_ : (MET279) (ASN305) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Sialic acid-binding protein SiaP |Haemophilus influenzae [TaxId: 727]
d2i76b1 : (LYS155) (MSE206) [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
d2e5na_ : (GLN77) (LYS98) [view usage] : a.4.5.81 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ELL N2 domain-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1jkua_ : (PRO88) (MET104) [view usage] : a.25.1.3 |Ferritin-like |Ferritin-like |Manganese catalase (T-catalase) |Manganese catalase (T-catalase) |Lactobacillus plantarum [TaxId: 1590]
d1h14a_ : (ASN19) (PHE41) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |Endo-1,4-beta-xylanase |Pseudoalteromonas haloplanktis [TaxId: 228]
d2ynmb_ : (THR82) (MET103) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Prochlorococcus marinus [TaxId: 1219]
d4wuob_ : (PRO110) (ARG124) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Thermus thermophilus [TaxId: 274]
d2a7na_ : (VAL8) (LEU27) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |automated matches |Pseudomonas putida [TaxId: 303]
d1xjta_ : (ILE15) (GLU42) [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Endolysin Lyz |Bacteriophage P1 [TaxId: 10678]
d2dvtb_ : (PRO14) (ILE39) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |Thermophilic reversible gamma-resorcylate decarboxylase |Rhizobium sp. MTP-10005 [TaxId: 267998]
d4jeia_ : (SER90) (ILE140) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Yarrowia lipolytica [TaxId: 4952]
d4gh9a_ : (SER209) (GLY243) [view usage] : d.388.1.1 |Filoviridae VP35-like |Filoviridae VP35-like |Filoviridae VP35 |Filoviridae VP35 |Marburg virus [TaxId: 33727]
d1h65a_ : (TRP11) (ASP36) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Chloroplast protein translocon GTPase Toc34 |Pea (Pisum sativum) [TaxId: 3888]
d1x8za_ : (ASP0) (LYS24) [view usage] : a.29.6.1 |Bromodomain-like |Plant invertase/pectin methylesterase inhibitor |Plant invertase/pectin methylesterase inhibitor |Pectin methylesterase inhibitor 1, PMEI1 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d4fcca1 : (TRP36) (GLU56) [view usage] : c.58.1.0 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |automated matches |automated matches |Escherichia coli [TaxId: 83334]
d1xw2a1 : (ASN19) (PHE41) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |Endo-1,4-beta-xylanase |Pseudoalteromonas haloplanktis [TaxId: 228]
d2b1xa2 : (GLU270) (THR291) [view usage] : d.129.3.3 |TBP-like |Bet v1-like |Ring hydroxylating alpha subunit catalytic domain |Naphthalene 1,2-dioxygenase alpha subunit, C-domain |Rhodococcus sp. ncimb12038 [TaxId: 92694]
d1xngb_ : (THR221) (LEU248) [view usage] : c.26.2.1 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |N-type ATP pyrophosphatases |automated matches |Helicobacter pylori [TaxId: 210]
d3hcgb_ : (SER382) (SER401) [view usage] : b.88.1.3 |Mss4-like |Mss4-like |SelR domain |automated matches |Neisseria meningitidis [TaxId: 65699]
d1fcaa_ : (GLY12) (CYS47) [view usage] : d.58.1.1 |Ferredoxin-like |4Fe-4S ferredoxins |Short-chain ferredoxins |Ferredoxin II |Clostridium acidurici [TaxId: 1556]
d1h65b_ : (TRP11) (ASP36) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Chloroplast protein translocon GTPase Toc34 |Pea (Pisum sativum) [TaxId: 3888]
d1xsla1 : (SER295) (GLY320) [view usage] : a.60.6.1 |SAM domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase beta, N-terminal domain-like |DNA polymerase lambda |Human (Homo sapiens) [TaxId: 9606]
d1x8zb_ : (MET4) (PHE25) [view usage] : a.29.6.1 |Bromodomain-like |Plant invertase/pectin methylesterase inhibitor |Plant invertase/pectin methylesterase inhibitor |Pectin methylesterase inhibitor 1, PMEI1 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2z15c_ : (MET10) (GLU50) [view usage] : d.370.1.1 |BTG domain-like |BTG domain-like |BTG domain-like |TOB1, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.80, e.3, c.1, b.82, c.69, b.81, c.94, a.104, c.2, d.58, i.1, c.108, c.140, c.26, c.56, a.102, d.117, c.77, c.124, a.211,
e.22, d.129, c.72, c.23, f.20, c.37, c.36, c.47, c.55, d.2, c.95, b.18, b.121, d.3, a.123, c.97, d.20, d.110, c.73, d.211,
a.25, d.17, e.13, c.51, d.167, d.87, a.100, a.4, a.39, h.3, a.138, e.26, a.3, c.88, c.58, b.88, a.29, d.26, a.87, a.24,
a.133, a.26, d.4, d.6, b.33, a.60, d.388, c.149, a.69, a.6, g.37, d.189, h.1, d.370, a.214, g.83