Tableau information
Concept source: d4lsoa_ amino acid (a.a.) range (ALA121)(SER145)
nSSEs in this Concept: 2
String of secondary struct.elems. (SSEs) defining this concept: HH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA121) (SER132) H1
(PRO134) (SER145) H2
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 150.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4nz2a_ : (PHE263) (THR299) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Mammalian cytochrome p450 2c9 |Human (Homo sapiens) [TaxId: 9606]
d2reaa_ : (ASP1464) (PRO1483) [view usage] : d.189.1.0 |PX domain |PX domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2no4b_ : (SER21) (HIS56) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Burkholderia cepacia [TaxId: 292]
d3orfa_ : (THR175) (THR191) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
d3pvia_ : (GLU116) (GLU151) [view usage] : c.52.1.6 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease PvuII |Restriction endonuclease PvuII |Proteus vulgaris [TaxId: 585]
d1bxla_ : (ALA0) (VAL30) [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |Apoptosis regulator Bcl-xL |Human (Homo sapiens) [TaxId: 9606]
d3k9fa_ : (ASN182) (PRO209) [view usage] : e.11.1.1 |Type II DNA topoisomerase C-terminal domain-like |Type II DNA topoisomerase C-terminal domain-like |Type II DNA topoisomerase C-terminal domain-like |DNA Gyrase A |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d3k2ha2 : (LEU279) (LYS302) [view usage] : d.117.1.0 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |automated matches |Babesia bovis [TaxId: 484906]
d1g5ca_ : (ILE2) (LYS22) [view usage] : c.53.2.1 |Resolvase-like |beta-carbonic anhydrase, cab |beta-carbonic anhydrase, cab |beta-carbonic anhydrase |Methanobacterium thermoautotrophicum [TaxId: 145262]
d2axpb_ : (VAL64) (ILE92) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Hypothetical protein YorR |Bacillus subtilis [TaxId: 1423]
d3tssa2 : (ILE126) (THR150) [view usage] : d.15.6.1 |beta-Grasp (ubiquitin-like) |Superantigen toxins, C-terminal domain |Superantigen toxins, C-terminal domain |Toxic shock syndrome toxin-1 (TSST-1) |Staphylococcus aureus [TaxId: 1280]
d2g9ea1 : (GLN63) (PHE120) [view usage] : a.241.1.1 |TraM-like |TraM-like |TraM-like |TraM |Escherichia coli [TaxId: 562]
d2ju0a_ : (LEU8) (GLN29) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Frequenin (neuronal calcium sensor 1) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2j6xc_ : (ASN21) (ILE41) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Aerococcus viridans [TaxId: 1377]
d1sqha_ : (PHE34) (LEU64) [view usage] : d.108.1.5 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |Hypothetical protein cg14615-pa |Hypothetical protein cg14615-pa |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d2j2fc_ : (ARG145) (GLY176) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Castor bean (Ricinus communis) [TaxId: 3988]
d1x91a_ : (SER2) (PHE25) [view usage] : a.29.6.1 |Bromodomain-like |Plant invertase/pectin methylesterase inhibitor |Plant invertase/pectin methylesterase inhibitor |Pectin methylesterase inhibitor 1, PMEI1 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1fzie_ : (LEU135) (GLY160) [view usage] : a.23.3.1 |Open three-helical up-and-down bundle |Methane monooxygenase hydrolase, gamma subunit |Methane monooxygenase hydrolase, gamma subunit |Methane monooxygenase hydrolase, gamma subunit |Methylococcus capsulatus [TaxId: 414]
d3kd2a_ : (GLU196) (SER215) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208963]
d2gtga_ : (CYS5) (PHE32) [view usage] : a.64.1.1 |Saposin-like |Saposin |NKL-like |Saposin C |Human (Homo sapiens) [TaxId: 9606]
d3g0ma_ : (LYS7) (LEU34) [view usage] : d.224.1.1 |SufE/NifU |SufE/NifU |SufE-like |automated matches |Salmonella typhimurium [TaxId: 99287]
d3k5la2 : (TYR749) (MET776) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |automated matches |Escherichia coli [TaxId: 562]
d1yhnb1 : (ARG245) (LEU306) [view usage] : h.1.34.1 |Parallel coiled-coil |RILP dimerisation region |RILP dimerisation region |Rab-interacting lysosomal protein RLIP |Human (Homo sapiens) [TaxId: 9606]
d3k92f1 : (ASN16) (MET42) [view usage] : c.58.1.0 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d2a0ma1 : (PHE166) (PHE180) [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |Arginase |Trypanosoma cruzi [TaxId: 5693]
d1up7a1 : (LEU84) (ALA116) [view usage] : c.2.1.5 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |LDH N-terminal domain-like |6-phospho-beta-glucosidase |Thermotoga maritima [TaxId: 2336]
d1ex5a_ : (ARG303) (GLY340) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Fructose-1,6-bisphosphate aldolase |Rabbit (Oryctolagus cuniculus), muscle isozyme [TaxId: 9986]
d1iw1c_ : (GLN741) (GLY759) [view usage] : a.132.1.1 |Heme oxygenase-like |Heme oxygenase-like |Eukaryotic type heme oxygenase |Heme oxygenase HmuO |Corynebacterium diphtheriae [TaxId: 1717]
d1mzgb_ : (LYS7) (ARG33) [view usage] : d.224.1.1 |SufE/NifU |SufE/NifU |SufE-like |SufE (YhnA) |Escherichia coli [TaxId: 562]
d2biya_ : (ASN240) (LYS257) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3k8za1 : (VAL17) (LEU42) [view usage] : c.58.1.0 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d1a76a1 : (ASP282) (THR316) [view usage] : a.60.7.1 |SAM domain-like |5' to 3' exonuclease, C-terminal subdomain |5' to 3' exonuclease, C-terminal subdomain |Flap endonuclease-1 (Fen-1 nuclease) |Methanococcus jannaschii [TaxId: 2190]
d1b3ba2 : (SER4) (ARG32) [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Glutamate dehydrogenase |Thermotoga maritima [TaxId: 2336]
d1qwza_ : (ALA29) (ASN68) [view usage] : b.100.1.1 |Sortase |Sortase |Sortase |Sortase B |Staphylococcus aureus [TaxId: 1280]
d1qx6a_ : (LYS33) (ASN68) [view usage] : b.100.1.1 |Sortase |Sortase |Sortase |Sortase B |Staphylococcus aureus [TaxId: 1280]
d2rhba2 : (SER207) (LYS226) [view usage] : d.294.1.2 |EndoU-like |EndoU-like |Nsp15 C-terminal domain-like |Nsp15, C-terminal domain |SARS coronavirus [TaxId: 227859]
d1mc8a1 : (ASP296) (GLY329) [view usage] : a.60.7.1 |SAM domain-like |5' to 3' exonuclease, C-terminal subdomain |5' to 3' exonuclease, C-terminal subdomain |Flap endonuclease-1 (Fen-1 nuclease) |Pyrococcus horikoshii [TaxId: 53953]
d2icyb2 : (LEU8) (GLY39) [view usage] : c.68.1.5 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |UDP-glucose pyrophosphorylase |UDP-glucose pyrophosphorylase 2 (UDPGP 2) |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1m2vb1 : (ASP647) (ILE690) [view usage] : a.71.2.1 |ERP29 C domain-like |Helical domain of Sec23/24 |Helical domain of Sec23/24 |Sec24 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1s95b_ : (LYS485) (MET499) [view usage] : d.159.1.3 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Protein serine/threonine phosphatase |Serine/threonine protein phosphatase 5, PP5 |Human (Homo sapiens) [TaxId: 9606]
d1toua_ : (PHE16) (ALA36) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Adipocyte lipid-binding protein, ALBP |Human (Homo sapiens) [TaxId: 9606]
d1mk2a_ : (ASN343) (ILE371) [view usage] : b.26.1.1 |SMAD/FHA domain |SMAD/FHA domain |SMAD domain |Smad3 MH2 domain |Human (Homo sapiens) [TaxId: 9606]
d1rc8a2 : (PRO115) (GLY148) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Polynucleotide kinase, kinase domain |Bacteriophage T4 [TaxId: 10665]
d1qs0a_ : (THR132) (SER155) [view usage] : c.36.1.11 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase PP module |2-oxoisovalerate dehydrogenase (E1B), PP module |Pseudomonas putida [TaxId: 303]
d2bmoa2 : (GLU408) (ILE439) [view usage] : d.129.3.3 |TBP-like |Bet v1-like |Ring hydroxylating alpha subunit catalytic domain |Nitrobenzene dioxygenase alpha subunit, NBDO-alpha |Comamonas sp. JS765 [TaxId: 58226]
d2bzbb_ : (GLY4) (ASN47) [view usage] : a.30.7.1 |ROP-like |BAS1536-like |BAS1536-like |automated matches |Bacillus anthracis [TaxId: 198094]
d1jd7a2 : (SER112) (GLN135) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Bacterial alpha-amylase |Pseudoalteromonas haloplanktis [TaxId: 228]
d3hcha_ : (ASP383) (SER401) [view usage] : b.88.1.3 |Mss4-like |Mss4-like |SelR domain |automated matches |Neisseria meningitidis [TaxId: 65699]
d3tsra_ : (SER4) (ASP35) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1u7ha_ : (LEU333) (GLY342) [view usage] : c.2.1.13 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Ornithine cyclodeaminase-like |Ornithine cyclodeaminase |Pseudomonas putida [TaxId: 303]
d4dmhb_ : (GLU196) (SER215) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208963]
d1s2ub_ : (HIS240) (LYS268) [view usage] : c.1.12.7 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |Phosphoenolpyruvate mutase/Isocitrate lyase-like |Phosphoenolpyruvate mutase |Blue mussel (Mytilus edulis) [TaxId: 6550]
d1t93a_ : (GLU122) (GLY162) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |automated matches |Streptomyces coelicolor [TaxId: 100226]
d1y01a_ : (GLU34) (SER91) [view usage] : a.7.11.1 |Spectrin repeat-like |Alpha-hemoglobin stabilizing protein AHSP |Alpha-hemoglobin stabilizing protein AHSP |Alpha-hemoglobin stabilizing protein AHSP |Human (Homo sapiens) [TaxId: 9606]
d3jwqa_ : (HIS617) (SER652) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2yxea_ : (ASP2) (LYS31) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 243232]
d3r42a_ : (GLU11) (ASN41) [view usage] : d.20.1.2 |UBC-like |UBC-like |UEV domain |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3gmjc_ : (ASN375) (CYS400) [view usage] : b.26.1.0 |SMAD/FHA domain |SMAD/FHA domain |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d3b48b_ : (VAL100) (ALA126) [view usage] : c.54.1.2 |PTS system fructose IIA component-like |PTS system fructose IIA component-like |DhaM-like |Uncharacterized protein EF1359 |Enterococcus faecalis [TaxId: 1351]
d1kqwa_ : (PHE16) (LEU36) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Cellular retinol-binding protein II (CRBP) |Zebrafish (Danio rerio) [TaxId: 7955]
d1eida_ : (THR3) (ASN34) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Ribonuclease A (also ribonuclease B, S) |Cow (Bos taurus) [TaxId: 9913]
d1jgna_ : (ILE32) (MET46) [view usage] : a.144.1.1 |PABP domain-like |PABC (PABP) domain |PABC (PABP) domain |poly(A) binding protein |Human (Homo sapiens) [TaxId: 9606]
d1r46a2 : (GLU203) (GLN221) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Melibiase |Human (Homo sapiens) [TaxId: 9606]
d2l67a_ : (ASN14) (GLY32) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Liver fatty acid binding protein |Human (Homo sapiens) [TaxId: 9606]
d2nwia1 : (ASN83) (ASN104) [view usage] : d.190.1.3 |Chorismate lyase-like |Chorismate lyase-like |AF1396-like |Hypothetical protein AF1396 |Archaeoglobus fulgidus [TaxId: 2234]
d3gagb_ : (LEU90) (PRO123) [view usage] : d.90.1.0 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |automated matches |automated matches |Streptococcus mutans [TaxId: 1309]
d4kqxa2 : (PHE194) (GLU241) [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Slackia exigua [TaxId: 649764]
d2nwif_ : (ASN83) (ASN104) [view usage] : d.190.1.3 |Chorismate lyase-like |Chorismate lyase-like |AF1396-like |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d1k8wa5 : (GLU217) (LEU241) [view usage] : d.265.1.2 |Pseudouridine synthase |Pseudouridine synthase |Pseudouridine synthase II TruB |Pseudouridine synthase II TruB |Escherichia coli [TaxId: 562]
d2q0ta1 : (GLU136) (ASP163) [view usage] : a.152.1.1 |AhpD-like |AhpD-like |AhpD |Hypothetical protein Bxeno_B2006 |Burkholderia xenovorans [TaxId: 36873]
d1do5a_ : (TYR134) (GLY145) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |Copper chaperone for superoxide dismutase, C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1bvnp2 : (SER132) (ARG158) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Animal alpha-amylase |Pig (Sus scrofa) [TaxId: 9823]
d3ijrf_ : (PRO229) (PHE243) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
d3ex7e_ : (LEU107) (PHE141) [view usage] : d.232.1.1 |Mago nashi protein |Mago nashi protein |Mago nashi protein |Mago nashi protein |Human (Homo sapiens) [TaxId: 9606]
d3k92b1 : (LEU19) (MET42) [view usage] : c.58.1.0 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d1wytb1 : (LEU5) (GLN61) [view usage] : c.67.1.7 |PLP-dependent transferase-like |PLP-dependent transferases |Glycine dehydrogenase subunits (GDC-P) |Glycine dehydrogenase subunit 2 (P-protein) |Thermus thermophilus [TaxId: 274]
d3zk5a_ : (ASP73) (LEU88) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces venezuelae [TaxId: 54571]
d2lgja_ : (ALA156) (TRP191) [view usage] : c.56.3.0 |Phosphorylase/hydrolase-like |Peptidyl-tRNA hydrolase-like |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d3raea_ : (ASN182) (PRO209) [view usage] : e.11.1.0 |Type II DNA topoisomerase C-terminal domain-like |Type II DNA topoisomerase C-terminal domain-like |automated matches |automated matches |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1ztpc_ : (VAL93) (HIS122) [view usage] : d.86.1.2 |eIF4e-like |eIF4e-like |BLES03-like |Basophilic leukemia expressed protein BLES03 |Human (Homo sapiens) [TaxId: 9606]
d1h7wb5 : (ILE868) (GLU899) [view usage] : d.58.1.5 |Ferredoxin-like |4Fe-4S ferredoxins |Ferredoxin domains from multidomain proteins |Dihydropyrimidine dehydrogenase, C-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
d2gm7a1 : (ARG170) (GLY211) [view usage] : a.132.1.3 |Heme oxygenase-like |Heme oxygenase-like |TENA/THI-4 |TenA homolog PAE0170 |Pyrobaculum aerophilum [TaxId: 13773]
d1s2ua_ : (LEU242) (LYS268) [view usage] : c.1.12.7 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |Phosphoenolpyruvate mutase/Isocitrate lyase-like |Phosphoenolpyruvate mutase |Blue mussel (Mytilus edulis) [TaxId: 6550]
d2g7oa1 : (GLN63) (PHE120) [view usage] : a.241.1.1 |TraM-like |TraM-like |TraM-like |TraM |Escherichia coli [TaxId: 562]
d1e7pa1 : (ASN606) (LEU637) [view usage] : a.7.3.1 |Spectrin repeat-like |Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |Fumarate reductase |Wolinella succinogenes [TaxId: 844]
d1rtwa_ : (SER158) (TYR206) [view usage] : a.132.1.3 |Heme oxygenase-like |Heme oxygenase-like |TENA/THI-4 |Putative transcriptional activator PF1337 |Pyrococcus furiosus [TaxId: 2261]
d3i3of_ : (PRO229) (PHE243) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
d2i9ta2 : (LEU126) (GLY150) [view usage] : b.2.5.3 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |Rel/Dorsal transcription factors, DNA-binding domain |p65 subunit of NF-kappa B (NFKB), N-terminal domain |Mouse (Mus musculus) [TaxId: 10090]
d1ek4a1 : (SER109) (GLY130) [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Beta-ketoacyl-ACP synthase I |Escherichia coli [TaxId: 562]
d2nyge_ : (PRO78) (TRP91) [view usage] : c.140.1.2 |TTHA0583/YokD-like |TTHA0583/YokD-like |Aminoglycoside 3-N-acetyltransferase-like |Uncharacterized protein YokD |Bacillus subtilis [TaxId: 1423]
d1ojhd_ : (SER8) (LYS53) [view usage] : a.214.1.1 |NblA-like |NblA-like |NblA-like |Phycobilisome degradation protein NblA |Nostoc sp. PCC 7120 [TaxId: 103690]
d2no4a_ : (SER21) (HIS56) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Burkholderia cepacia [TaxId: 292]
d2qi9a_ : (THR3) (LEU80) [view usage] : f.22.1.1 |ABC transporter involved in vitamin B12 uptake, BtuC |ABC transporter involved in vitamin B12 uptake, BtuC |ABC transporter involved in vitamin B12 uptake, BtuC |ABC transporter involved in vitamin B12 uptake, BtuC |Escherichia coli [TaxId: 562]
d2f6md_ : (ALA99) (ARG117) [view usage] : a.2.17.2 |Long alpha-hairpin |Endosomal sorting complex assembly domain |VPS28 N-terminal domain |Vacuolar protein sorting-associated protein 28, VPS28 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1e1ea_ : (PRO299) (LYS320) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Plant beta-glucosidase (myrosinase) |Maize (Zea mays), zmglu1 [TaxId: 4577]
d1f2ga_ : (GLU12) (CYS50) [view usage] : d.58.1.4 |Ferredoxin-like |4Fe-4S ferredoxins |Single 4Fe-4S cluster ferredoxin |Ferredoxin I |Desulfovibrio gigas [TaxId: 879]
d2oc6a1 : (SER5) (PRO32) [view usage] : d.198.4.1 |Secretion chaperone-like |YdhG-like |YdhG-like |Uncharacterized protein YdhG |Bacillus subtilis [TaxId: 1423]
d3s4te_ : (GLU14) (ILE39) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |automated matches |Polaromonas sp. [TaxId: 296591]
d4eria_ : (GLY183) (ILE210) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD |Pseudomonas fluorescens [TaxId: 294]
d1b8pa1 : (THR138) (THR156) [view usage] : c.2.1.5 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |LDH N-terminal domain-like |Malate dehydrogenase |Aquaspirillum arcticum [TaxId: 87645]
d2tmga2 : (SER4) (ARG31) [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Glutamate dehydrogenase |Thermotoga maritima [TaxId: 2336]
d4eeja_ : (ASN15) (LEU36) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1snza_ : (THR220) (HIS238) [view usage] : b.30.5.4 |Supersandwich |Galactose mutarotase-like |Aldose 1-epimerase (mutarotase) |Galactose mutarotase |Human (Homo sapiens) [TaxId: 9606]
d4a19o_ : (VAL87) (LYS133) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, cytoplasmic (60S subunit) |Tetrahymena thermophila [TaxId: 5911]
d3c9ub1 : (PHE9) (ASP26) [view usage] : d.79.4.1 |Bacillus chorismate mutase-like |PurM N-terminal domain-like |PurM N-terminal domain-like |Thiamine monophosphate kinase (ThiL) N-terminal domain |Aquifex aeolicus [TaxId: 63363]
d2cx7a_ : (LEU80) (ARG99) [view usage] : d.106.1.1 |SCP-like |SCP-like |Sterol carrier protein, SCP |automated matches |Thermus thermophilus [TaxId: 274]
d2uw1b_ : (ARG140) (GLY171) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Hedera helix [TaxId: 4052]
d3cr6a_ : (ASN14) (SER37) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Cellular retinoic-acid-binding protein (CRABP) |Human (Homo sapiens), CRABP-II [TaxId: 9606]
d2cd8a_ : (ASP73) (LEU88) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces venezuelae [TaxId: 54571]
d3rema_ : (ALA11) (ALA50) [view usage] : a.130.1.1 |Chorismate mutase II |Chorismate mutase II |Dimeric chorismate mutase |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d3i3oe_ : (PRO229) (PHE243) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
d4it1a1 : (LEU73) (LEU126) [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 205922]
d1d2na_ : (GLY714) (GLU744) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein |Chinese hamster (Cricetulus griseus) [TaxId: 10029]
d1gtma2 : (ASP4) (LYS31) [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Glutamate dehydrogenase |Pyrococcus furiosus [TaxId: 2261]
d2ij0a2 : (ALA125) (THR150) [view usage] : d.15.6.1 |beta-Grasp (ubiquitin-like) |Superantigen toxins, C-terminal domain |Superantigen toxins, C-terminal domain |Toxic shock syndrome toxin-1 (TSST-1) |Staphylococcus aureus [TaxId: 1280]
d4nd8a_ : (SER5) (LEU32) [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |automated matches |Azotobacter vinelandii [TaxId: 354]
d4kqwb2 : (PHE194) (GLU241) [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Slackia exigua [TaxId: 649764]
d1b43a1 : (ASP295) (LEU333) [view usage] : a.60.7.1 |SAM domain-like |5' to 3' exonuclease, C-terminal subdomain |5' to 3' exonuclease, C-terminal subdomain |Flap endonuclease-1 (Fen-1 nuclease) |Pyrococcus furiosus [TaxId: 2261]
d1jd9a2 : (SER112) (GLN135) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Bacterial alpha-amylase |Pseudoalteromonas haloplanktis [TaxId: 228]
d1nqta2 : (ASN8) (LYS53) [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Glutamate dehydrogenase |Cow (Bos taurus) [TaxId: 9913]
d2y5ic_ : (ASP61) (LYS99) [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
d1x0ph_ : (ASP7102) (MET7139) [view usage] : d.58.10.2 |Ferredoxin-like |Acylphosphatase/BLUF domain-like |BLUF domain |Hypothetical protein Tll0078 |Thermosynechococcus elongatus [TaxId: 146786]
d4r7ta_ : (ASP240) (GLU259) [view usage] : c.124.1.1 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |NagB-like |automated matches |Vibrio cholerae [TaxId: 243277]
d4ahia_ : (ARG5) (GLY34) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |Angiogenin |Human (Homo sapiens) [TaxId: 9606]
d1ojha_ : (SER8) (GLN55) [view usage] : a.214.1.1 |NblA-like |NblA-like |NblA-like |Phycobilisome degradation protein NblA |Nostoc sp. PCC 7120 [TaxId: 103690]
d3gmwb_ : (LEU82) (ALA99) [view usage] : d.98.1.0 |BLIP-like |beta-lactamase-inhibitor protein, BLIP |automated matches |automated matches |Streptomyces exfoliatus [TaxId: 1905]
d1b26a2 : (SER4) (ARG32) [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Glutamate dehydrogenase |Thermotoga maritima [TaxId: 2336]
d2gm8a_ : (SER166) (GLU210) [view usage] : a.132.1.0 |Heme oxygenase-like |Heme oxygenase-like |automated matches |automated matches |Pyrobaculum aerophilum [TaxId: 178306]
d2bp7a_ : (THR132) (SER155) [view usage] : c.36.1.11 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase PP module |automated matches |Pseudomonas putida [TaxId: 303]
d2pwqa_ : (LEU88) (ASP114) [view usage] : d.20.1.0 |UBC-like |UBC-like |automated matches |automated matches |Plasmodium yoelii [TaxId: 5861]
d3lqvb_ : (ASN93) (GLY118) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ooea_ : (THR180) (THR196) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Dihydropteridin reductase (pteridine reductase) |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d2bzba1 : (GLY4) (PHE45) [view usage] : a.30.7.1 |ROP-like |BAS1536-like |BAS1536-like |Hypothetical protein BAS1536 |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d1rtwc_ : (SER158) (TYR206) [view usage] : a.132.1.3 |Heme oxygenase-like |Heme oxygenase-like |TENA/THI-4 |Putative transcriptional activator PF1337 |Pyrococcus furiosus [TaxId: 2261]
d2uw1a_ : (ARG140) (GLY171) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Hedera helix [TaxId: 4052]
d4wa8a2 : (GLU303) (GLY339) [view usage] : a.60.7.0 |SAM domain-like |5' to 3' exonuclease, C-terminal subdomain |automated matches |automated matches |Methanopyrus kandleri [TaxId: 190192]
d2bs3a1 : (PRO607) (LEU637) [view usage] : a.7.3.1 |Spectrin repeat-like |Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |Fumarate reductase |Wolinella succinogenes [TaxId: 844]
d3rzna_ : (VAL126) (LEU152) [view usage] : a.224.1.1 |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Human (Homo sapiens) [TaxId: 9606]
d4ghlb_ : (SER209) (GLY243) [view usage] : d.388.1.1 |Filoviridae VP35-like |Filoviridae VP35-like |Filoviridae VP35 |Filoviridae VP35 |Lake Victoria marburgvirus [TaxId: 33728]
d4mqbb_ : (ILE94) (ALA119) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Staphylococcus aureus [TaxId: 158878]
d1csei_ : (PHE10) (TYR24) [view usage] : d.40.1.1 |CI-2 family of serine protease inhibitors |CI-2 family of serine protease inhibitors |CI-2 family of serine protease inhibitors |Eglin C |Medicinal leech (Hirudo medicinalis) [TaxId: 6421]
d1wpba_ : (TRP140) (ALA170) [view usage] : a.233.1.1 |YfbU-like |YfbU-like |YfbU-like |Hypothetical protein YfbU |Escherichia coli [TaxId: 562]
d4it1d1 : (LEU73) (ASN127) [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 205922]
d3orya2 : (PRO305) (GLU336) [view usage] : a.60.7.0 |SAM domain-like |5' to 3' exonuclease, C-terminal subdomain |automated matches |automated matches |Desulfurococcus amylolyticus [TaxId: 94694]
d2pkna_ : (TYR300) (LEU323) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d3reta_ : (LEU10) (ALA50) [view usage] : a.130.1.1 |Chorismate mutase II |Chorismate mutase II |Dimeric chorismate mutase |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d2daya1 : (SER87) (LEU122) [view usage] : d.20.1.3 |UBC-like |UBC-like |RWD domain |E3 ubiquitin-protein ligase RNF25 |Human (Homo sapiens) [TaxId: 9606]
d2xzmi_ : (GLY75) (TYR114) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Tetrahymena thermophila [TaxId: 5911]
d1sibi_ : (PHE10) (TYR29) [view usage] : d.40.1.1 |CI-2 family of serine protease inhibitors |CI-2 family of serine protease inhibitors |CI-2 family of serine protease inhibitors |Eglin C |Medicinal leech (Hirudo medicinalis) [TaxId: 6421]
d1pdoa_ : (ILE95) (VAL126) [view usage] : c.54.1.1 |PTS system fructose IIA component-like |PTS system fructose IIA component-like |EIIA-man component-like |IIA domain of mannose transporter, IIA-Man |Escherichia coli [TaxId: 562]
d3ui4a_ : (LYS47) (GLN70) [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2gnpa1 : (SER214) (LYS237) [view usage] : c.124.1.8 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |SorC sugar-binding domain-like |Transcriptional regulator SP0247 |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d3k92e1 : (LYS12) (MET42) [view usage] : c.58.1.0 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d1ojhg_ : (SER8) (GLN55) [view usage] : a.214.1.1 |NblA-like |NblA-like |NblA-like |Phycobilisome degradation protein NblA |Nostoc sp. PCC 7120 [TaxId: 103690]
d3lqva_ : (ASN93) (GLY118) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3m3fa_ : (ASN22) (GLU33) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1jswa_ : (SER437) (ASP455) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |L-aspartate ammonia lyase |Escherichia coli [TaxId: 562]
d3ifzb_ : (ASN193) (VAL223) [view usage] : e.11.1.0 |Type II DNA topoisomerase C-terminal domain-like |Type II DNA topoisomerase C-terminal domain-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d1g20a_ : (GLU7) (LEU32) [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |Nitrogenase iron-molybdenum protein, alpha chain |Azotobacter vinelandii [TaxId: 354]
d1kr5a_ : (SER8) (THR34) [view usage] : c.66.1.7 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Protein-L-isoaspartyl O-methyltransferase |Protein-L-isoaspartyl O-methyltransferase |Human (Homo sapiens) [TaxId: 9606]
d2j2fa_ : (ARG145) (GLY176) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Castor bean (Ricinus communis) [TaxId: 3988]
d3ijza_ : (PHE54) (ARG78) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Lactobacillus casei [TaxId: 1582]
d1q3xa1 : (HIS595) (THR613) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d2j3wb1 : (SER27) (ASN75) [view usage] : d.278.1.2 |Ligand-binding domain in the NO signalling and Golgi transport |Ligand-binding domain in the NO signalling and Golgi transport |TRAPP components |TRAPPC5, similar to trafficking protein particle complex 5 |Zebrafish (Danio rerio) [TaxId: 7955]
d2y8ua_ : (LYS164) (ASN176) [view usage] : c.6.2.0 |7-stranded beta/alpha barrel |Glycoside hydrolase/deacetylase |automated matches |automated matches |Emericella nidulans [TaxId: 162425]
d3dafa2 : (CYS253) (GLY301) [view usage] : a.100.1.11 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |HMD dimerization domain-like |5,10-methenyltetrahydromethanopterin hydrogenase, HMD |Methanocaldococcus jannaschii [TaxId: 2190]
d2x7va_ : (LEU157) (ALA174) [view usage] : c.1.15.0 |TIM beta/alpha-barrel |Xylose isomerase-like |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d3erda_ : (ARG412) (ASN439) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Estrogen receptor alpha |Human (Homo sapiens) [TaxId: 9606]
d2xv6a_ : (PHE161) (GLU187) [view usage] : a.28.3.1 |Acyl carrier protein-like |Retrovirus capsid dimerization domain-like |Retrovirus capsid protein C-terminal domain |automated matches |Human immunodeficiency virus 1 [TaxId: 11676]
d4gkca_ : (ASN15) (LEU36) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1mzga_ : (ASP6) (ARG33) [view usage] : d.224.1.1 |SufE/NifU |SufE/NifU |SufE-like |SufE (YhnA) |Escherichia coli [TaxId: 562]
d2gm7d_ : (PRO167) (GLY211) [view usage] : a.132.1.0 |Heme oxygenase-like |Heme oxygenase-like |automated matches |automated matches |Pyrobaculum aerophilum [TaxId: 178306]
d2yjab_ : (ARG412) (ASN439) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Estrogen receptor alpha |Human (Homo sapiens) [TaxId: 9606]
d1fdna_ : (GLY12) (CYS47) [view usage] : d.58.1.1 |Ferredoxin-like |4Fe-4S ferredoxins |Short-chain ferredoxins |Ferredoxin II |Clostridium acidurici [TaxId: 1556]
d2ccga_ : (ILE94) (ILE120) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
d1c20a_ : (GLU7) (GLN37) [view usage] : a.4.3.1 |DNA/RNA-binding 3-helical bundle |ARID-like |ARID domain |DNA-binding domain from the dead ringer protein |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d2d26a1 : (THR150) (LYS174) [view usage] : e.1.1.1 |Serpins |Serpins |Serpins |Antitrypsin, alpha-1 |Human (Homo sapiens) [TaxId: 9606]
d2fzpa1 : (ALA223) (ALA250) [view usage] : d.345.1.1 |NRDP1 C-terminal domain-like |NRDP1 C-terminal domain-like |USP8 interacting domain |E3 ubiquitin-protein ligase NRDP1 |Human (Homo sapiens) [TaxId: 9606]
d2e21b2 : (ASN218) (LYS262) [view usage] : d.229.1.1 |MesJ substrate recognition domain-like |MesJ substrate recognition domain-like |MesJ substrate recognition domain-like |TilS-like protein Aq_1887 |Aquifex aeolicus [TaxId: 63363]
d1hbmb2 : (ASN49) (ALA82) [view usage] : d.58.31.2 |Ferredoxin-like |Methyl-coenzyme M reductase subunits |Methyl-coenzyme M reductase alpha and beta chain N-terminal domain |Beta chain |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1euza2 : (PRO6) (LYS33) [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Glutamate dehydrogenase |Thermococcus profundus [TaxId: 49899]
d1s4bp_ : (ASN283) (GLY325) [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |Neurolysin (endopeptidase 24.16, thimet oligopeptidase) |Human (Homo sapiens) [TaxId: 9606]
d1bifa1 : (SER175) (TYR201) [view usage] : c.37.1.7 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain |6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1ul1z1 : (ASN302) (GLN333) [view usage] : a.60.7.1 |SAM domain-like |5' to 3' exonuclease, C-terminal subdomain |5' to 3' exonuclease, C-terminal subdomain |Flap endonuclease-1 (Fen-1 nuclease) |Human (Homo sapiens) [TaxId: 9606]
d1gmgb_ : (LYS3) (PHE56) [view usage] : a.30.1.1 |ROP-like |ROP protein |ROP protein |ROP protein |Escherichia coli [TaxId: 562]
d2o2db_ : (SER328) (ALA363) [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Trypanosoma brucei [TaxId: 5702]
d2ogba_ : (ASP222) (ALA250) [view usage] : d.345.1.1 |NRDP1 C-terminal domain-like |NRDP1 C-terminal domain-like |USP8 interacting domain |E3 ubiquitin-protein ligase NRDP1 |Human (Homo sapiens) [TaxId: 9606]
d1ecma_ : (ASN5) (LEU55) [view usage] : a.130.1.1 |Chorismate mutase II |Chorismate mutase II |Dimeric chorismate mutase |Chorismate mutase domain of P-protein |Escherichia coli [TaxId: 562]
d4bp0c_ : (ASP144) (SER163) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d4lr3a_ : (MET139) (ALA170) [view usage] : a.233.1.1 |YfbU-like |YfbU-like |YfbU-like |automated matches |Escherichia coli [TaxId: 562]
d2axpa1 : (VAL64) (ILE92) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Hypothetical protein YorR |Bacillus subtilis [TaxId: 1423]
d1rtwb_ : (SER158) (TYR206) [view usage] : a.132.1.3 |Heme oxygenase-like |Heme oxygenase-like |TENA/THI-4 |Putative transcriptional activator PF1337 |Pyrococcus furiosus [TaxId: 2261]
d4trib_ : (ASP314) (GLY337) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d1bhsa_ : (LEU260) (VAL283) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Human estrogenic 17beta-hydroxysteroid dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
d2qyka_ : (SER374) (ILE411) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2hc5a1 : (LEU9) (GLU52) [view usage] : d.352.1.1 |FlaG-like |FlaG-like |FlaG-like |Hypothetical protein YvyC |Bacillus subtilis [TaxId: 1423]
d2rqgb_ : (ALA547) (ALA572) [view usage] : a.144.1.1 |PABP domain-like |PABC (PABP) domain |PABC (PABP) domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ojhb_ : (LEU9) (HIS54) [view usage] : a.214.1.1 |NblA-like |NblA-like |NblA-like |Phycobilisome degradation protein NblA |Nostoc sp. PCC 7120 [TaxId: 103690]
d3lx9a1 : (SER203) (TYR222) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Melibiase |Human (Homo sapiens) [TaxId: 9606]
d3faka_ : (ASP182) (TYR206) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Uncultured bacterium [TaxId: 77133]
d4edha_ : (THR98) (VAL123) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d1tj7a_ : (ILE84) (HIS104) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Escherichia coli [TaxId: 562]
d1abva_ : (PHE3) (ASN40) [view usage] : a.70.1.1 |ATPD N-terminal domain-like |N-terminal domain of the delta subunit of the F1F0-ATP synthase |N-terminal domain of the delta subunit of the F1F0-ATP synthase |N-terminal domain of the delta subunit of the F1F0-ATP synthase |Escherichia coli [TaxId: 562]
d2y8ub_ : (LYS164) (ASN176) [view usage] : c.6.2.0 |7-stranded beta/alpha barrel |Glycoside hydrolase/deacetylase |automated matches |automated matches |Emericella nidulans [TaxId: 162425]
d1oipa2 : (PHE203) (ILE222) [view usage] : c.13.1.1 |SpoIIaa-like |CRAL/TRIO domain |CRAL/TRIO domain |Alpha-tocopherol transfer protein |Human (Homo sapiens) [TaxId: 9606]
d3ikha_ : (ASP250) (THR285) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 272620]
d1ojhj_ : (SER8) (LYS53) [view usage] : a.214.1.1 |NblA-like |NblA-like |NblA-like |Phycobilisome degradation protein NblA |Nostoc sp. PCC 7120 [TaxId: 103690]
d1qxaa_ : (GLU31) (ASN68) [view usage] : b.100.1.1 |Sortase |Sortase |Sortase |Sortase B |Staphylococcus aureus [TaxId: 1280]
d3n34a_ : (GLY265) (ASN279) [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Plasmodium falciparum [TaxId: 36329]
d1e6yb2 : (ASN2046) (ALA2079) [view usage] : d.58.31.2 |Ferredoxin-like |Methyl-coenzyme M reductase subunits |Methyl-coenzyme M reductase alpha and beta chain N-terminal domain |Beta chain |Methanosarcina barkeri [TaxId: 2208]
d3a2fa2 : (THR630) (TYR654) [view usage] : e.8.1.0 |DNA/RNA polymerases |DNA/RNA polymerases |automated matches |automated matches |Pyrococcus furiosus [TaxId: 2261]
d2jzna_ : (ILE95) (VAL126) [view usage] : c.54.1.1 |PTS system fructose IIA component-like |PTS system fructose IIA component-like |EIIA-man component-like |IIA domain of mannose transporter, IIA-Man |Escherichia coli [TaxId: 562]
d3d8aa_ : (GLN63) (PHE120) [view usage] : a.241.1.1 |TraM-like |TraM-like |TraM-like |TraM |Escherichia coli K-12 [TaxId: 83333]
d3thab_ : (GLY224) (PHE247) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d1rxva1 : (PHE297) (LYS321) [view usage] : a.60.7.1 |SAM domain-like |5' to 3' exonuclease, C-terminal subdomain |5' to 3' exonuclease, C-terminal subdomain |Flap endonuclease-1 (Fen-1 nuclease) |Archaeoglobus fulgidus [TaxId: 2234]
d1sxda_ : (MET167) (PHE205) [view usage] : a.60.1.1 |SAM domain-like |SAM/Pointed domain |Pointed domain |GABP-alpha subunit |Mouse (Mus musculus) [TaxId: 10090]
d1n1ea1 : (ASP199) (GLY249) [view usage] : a.100.1.6 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |Glycerol-3-phosphate dehydrogenase |Glycerol-3-phosphate dehydrogenase |Trypanosome (Leishmania mexicana) [TaxId: 5665]
d1cp2a_ : (SER55) (LEU73) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Nitrogenase iron protein |Clostridium pasteurianum [TaxId: 1501]
d2fjka_ : (ASP253) (GLY300) [view usage] : c.1.10.2 |TIM beta/alpha-barrel |Aldolase |Class II FBP aldolase |automated matches |Thermus caldophilus [TaxId: 272]
d2xh8a_ : (GLY263) (LEU288) [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Salmonella enterica [TaxId: 90371]
d1u8ua_ : (MET141) (VAL178) [view usage] : c.23.10.5 |Flavodoxin-like |SGNH hydrolase |TAP-like |Thioesterase I, TAP |Escherichia coli [TaxId: 562]
d3ks4b_ : (SER209) (ASN242) [view usage] : d.388.1.1 |Filoviridae VP35-like |Filoviridae VP35-like |Filoviridae VP35 |Filoviridae VP35 |Reston ebolavirus [TaxId: 129003]
d2evsa_ : (ILE124) (TYR153) [view usage] : a.224.1.1 |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Human (Homo sapiens) [TaxId: 9606]
d1n0ua1 : (SER344) (ASP363) [view usage] : b.43.3.1 |Reductase/isomerase/elongation factor common domain |Translation proteins |Elongation factors |Elongation factor 2 (eEF-2), domain II |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2gaxa1 : (GLU87) (PHE105) [view usage] : c.131.1.1 |Peptidyl-tRNA hydrolase II |Peptidyl-tRNA hydrolase II |Peptidyl-tRNA hydrolase II |Hypothetical protein Atu0240 |Agrobacterium tumefaciens [TaxId: 358]
d1kx9a_ : (ILE78) (ALA104) [view usage] : a.118.21.1 |alpha-alpha superhelix |Chemosensory protein Csp2 |Chemosensory protein Csp2 |Chemosensory protein Csp2 |Cabbage moth (Mamestra brassicae) [TaxId: 55057]
d1tqha_ : (SER123) (GLN158) [view usage] : c.69.1.29 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase/lipase |Carboxylesterase Est |Bacillus stearothermophilus [TaxId: 1422]
d1qlba1 : (ASN606) (LEU637) [view usage] : a.7.3.1 |Spectrin repeat-like |Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |Fumarate reductase |Wolinella succinogenes [TaxId: 844]
d1gjia2 : (LEU114) (ASN138) [view usage] : b.2.5.3 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |Rel/Dorsal transcription factors, DNA-binding domain |p65 subunit of NF-kappa B (NFKB), N-terminal domain |Chicken (Gallus gallus), C-rel [TaxId: 9031]
d3cqla_ : (SER7) (THR30) [view usage] : d.2.1.1 |Lysozyme-like |Lysozyme-like |Family 19 glycosidase |automated matches |Papaya (Carica papaya) [TaxId: 3649]
d1m1na_ : (SER5) (LEU32) [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |Nitrogenase iron-molybdenum protein, alpha chain |Azotobacter vinelandii [TaxId: 354]
d3aevb1 : (ALA89) (ASN114) [view usage] : d.51.1.0 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 53953]
d2xt1a_ : (PHE161) (THR188) [view usage] : a.28.3.1 |Acyl carrier protein-like |Retrovirus capsid dimerization domain-like |Retrovirus capsid protein C-terminal domain |automated matches |Human immunodeficiency virus 1 [TaxId: 11676]
d1ng5a_ : (GLN5) (ASN39) [view usage] : b.100.1.1 |Sortase |Sortase |Sortase |Sortase B |Staphylococcus aureus [TaxId: 1280]
d4lata_ : (PHE88) (VAL101) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 170187]
d1repc2 : (LEU151) (GLN171) [view usage] : a.4.5.10 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Replication initiation protein |RepE54 |Escherichia coli, mini-F plasmid [TaxId: 562]
d3lbfa_ : (SER3) (VAL30) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1a0da_ : (GLY186) (GLU219) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Bacillus stearothermophilus [TaxId: 1422]
d2joka_ : (ASP80) (ASP133) [view usage] : a.168.1.1 |SopE-like GEF domain |SopE-like GEF domain |SopE-like GEF domain |Effector protein BopE |Burkholderia pseudomallei [TaxId: 28450]
d4k2ha_ : (VAL156) (TYR182) [view usage] : c.23.16.0 |Flavodoxin-like |Class I glutamine amidotransferase-like |automated matches |automated matches |Salmonella enterica [TaxId: 99287]
d2op2a_ : (THR3) (ASN34) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |automated matches |Cow (Bos taurus) [TaxId: 9913]
d3gmja_ : (ASN374) (CYS400) [view usage] : b.26.1.0 |SMAD/FHA domain |SMAD/FHA domain |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d3brjb_ : (ILE5) (PHE43) [view usage] : a.285.1.1 |MtlR-like |MtlR-like |MtlR-like |Mannitol operon repressor MtlR |Vibrio parahaemolyticus [TaxId: 670]
d2f9da1 : (ASN93) (GLY118) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Pre-mRNA branch site protein p14 |Human (Homo sapiens) [TaxId: 9606]
d1foka4 : (SER388) (ASN417) [view usage] : c.52.1.12 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease FokI, C-terminal (catalytic) domain |Restriction endonuclease FokI, C-terminal (catalytic) domain |Flavobacterium okeanokoites [TaxId: 244]
d3gmxa_ : (ARG78) (ALA96) [view usage] : d.98.1.0 |BLIP-like |beta-lactamase-inhibitor protein, BLIP |automated matches |automated matches |Streptomyces clavuligerus [TaxId: 1901]
d1wpbm_ : (TRP140) (ALA170) [view usage] : a.233.1.1 |YfbU-like |YfbU-like |YfbU-like |Hypothetical protein YfbU |Escherichia coli [TaxId: 562]
d1t77a1 : (ASN2454) (SER2473) [view usage] : a.169.1.1 |BEACH domain |BEACH domain |BEACH domain |Lipopolysaccharide-responsive and beige-like anchor protein LRBA |Human (Homo sapiens) [TaxId: 9606]
d3hg3a1 : (GLU203) (TYR222) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Melibiase |Human (Homo sapiens) [TaxId: 9606]
d1ej8a_ : (LYS136) (GLY147) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |Copper chaperone for superoxide dismutase, C-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1grnb_ : (PRO384) (LEU424) [view usage] : a.116.1.1 |GTPase activation domain, GAP |GTPase activation domain, GAP |BCR-homology GTPase activation domain (BH-domain) |Cdc42GAP |Human (Homo sapiens) [TaxId: 9606]
d1dhra_ : (THR183) (THR199) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Dihydropteridin reductase (pteridine reductase) |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1ul1x1 : (GLU303) (ARG332) [view usage] : a.60.7.1 |SAM domain-like |5' to 3' exonuclease, C-terminal subdomain |5' to 3' exonuclease, C-terminal subdomain |Flap endonuclease-1 (Fen-1 nuclease) |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.1, c.67, c.69, c.94, a.104, c.2, d.159, c.6, d.58, i.1, a.118, c.68, c.108, c.140, b.30, b.47, c.56, c.92, d.157,
d.117, c.66, c.80, d.92, c.124, c.42, a.127, a.211, d.129, c.72, c.23, d.144, c.37, c.36, d.2, c.95, b.60, b.2, c.13, b.1,
e.11, a.132, a.123, d.108, d.20, c.53, a.25, d.278, d.17, d.98, d.106, d.79, c.52, b.26, e.1, a.152, a.100, a.4, d.90, d.5,
a.39, d.232, c.54, d.15, c.58, b.43, b.88, a.224, a.29, f.1, a.23, d.54, d.26, a.116, d.86, d.224, a.60, a.28, d.388, d.51,
d.198, d.265, a.71, a.7, a.130, f.22, a.64, a.2, a.144, b.100, c.131, d.189, a.70, h.1, a.30, d.294, d.229, a.169, a.168, a.233,
a.285, d.190, d.345, d.40, d.352, a.214, a.241