Tableau information
Concept source: d2ofia_ amino acid (a.a.) range (ARG53)(MSE71)
nSSEs in this Concept: 2
String of secondary struct.elems. (SSEs) defining this concept: HH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG53) (CYS59) H1
(PRO65) (MSE71) H2
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 73.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1zj8a2 : (ASN24) (GLU43) [view usage] : d.58.36.1 |Ferredoxin-like |Nitrite/Sulfite reductase N-terminal domain-like |Duplicated SiR/NiR-like domains 1 and 3 |Sulfite reductase NirA |Mycobacterium tuberculosis [TaxId: 1773]
d1occi_ : (GLY11) (GLY67) [view usage] : f.23.3.1 |Single transmembrane helix |Mitochondrial cytochrome c oxidase subunit VIc |Mitochondrial cytochrome c oxidase subunit VIc |Mitochondrial cytochrome c oxidase subunit VIc |Cow (Bos taurus) [TaxId: 9913]
d3lasa_ : (CYS94) (ARG110) [view usage] : c.53.2.0 |Resolvase-like |beta-carbonic anhydrase, cab |automated matches |automated matches |Streptococcus mutans [TaxId: 1309]
d1ei5a3 : (ASP83) (ASN105) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |D-aminopeptidase, N-terminal domain |Ochrobactrum anthropi [TaxId: 529]
d1ydua1 : (GLU56) (ASN74) [view usage] : b.162.1.1 |At5g01610-like |At5g01610-like |At5g01610-like |Hypothetical protein At5g01610 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2b0of1 : (ASN499) (HIS538) [view usage] : g.45.1.0 |ArfGap/RecO-like zinc finger |ArfGap/RecO-like zinc finger |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2fsna1 : (LYS306) (SER325) [view usage] : c.55.1.12 |Ribonuclease H-like motif |Actin-like ATPase domain |Ta0583-like |Hypothetical protein Ta0583 |Thermoplasma acidophilum [TaxId: 2303]
d1ep3a_ : (ALA23) (TYR37) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Dihydroorotate dehydrogenase |Lactococcus lactis, isozyme B [TaxId: 1358]
d3s97a_ : (SER39) (PRO54) [view usage] : b.74.1.0 |Carbonic anhydrase |Carbonic anhydrase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1j49a1 : (PRO104) (HIS132) [view usage] : c.2.1.4 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Formate/glycerate dehydrogenases, NAD-domain |D-lactate dehydrogenase |Lactobacillus helveticus [TaxId: 1587]
d4r6ka_ : (GLU135) (GLY167) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Bacillus subtilis [TaxId: 224308]
d1gxpe_ : (SER175) (GLU207) [view usage] : a.4.6.1 |DNA/RNA-binding 3-helical bundle |C-terminal effector domain of the bipartite response regulators |PhoB-like |PhoB |Escherichia coli [TaxId: 562]
d1orpa_ : (ASP139) (ILE168) [view usage] : a.96.1.1 |DNA-glycosylase |DNA-glycosylase |Endonuclease III |Endonuclease III |Escherichia coli [TaxId: 562]
d2jbwd_ : (THR252) (GLU280) [view usage] : c.69.1.41 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |2,6-dihydropseudooxynicotine hydrolase-like |2,6-dihydropseudooxynicotine hydrolase |Arthrobacter nicotinovorans [TaxId: 29320]
d1twci2 : (GLY53) (SER64) [view usage] : g.41.3.1 |Rubredoxin-like |Zinc beta-ribbon |Transcriptional factor domain |RBP9 subunit of RNA polymerase II |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4av7a1 : (ALA188) (ALA199) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas sp. [TaxId: 1007495]
d4a17v_ : (ALA217) (MET238) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, cytoplasmic (60S subunit) |Tetrahymena thermophila [TaxId: 5911]
d2pnkc_ : (GLU177) (ARG214) [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
d1mofa_ : (ARG48) (LYS90) [view usage] : h.3.2.1 |Stalk segment of viral fusion proteins |Virus ectodomain |Virus ectodomain |MoMLV p15 core fragment |Moloney murine leukemia virus, MoMLV [TaxId: 11801]
d2zxxd_ : (TYR95) (LEU155) [view usage] : h.1.28.1 |Parallel coiled-coil |Geminin coiled-coil domain |Geminin coiled-coil domain |Geminin coiled-coil domain |Mouse (Mus musculus) [TaxId: 10090]
d3fa4l_ : (PRO272) (GLY292) [view usage] : c.1.12.0 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |automated matches |automated matches |Aspergillus niger [TaxId: 5061]
d1xs5a_ : (ASN177) (GLY190) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Putative lipoprotein (NlpA family) |Treponema pallidum [TaxId: 160]
d1ep1a_ : (ALA23) (TYR37) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Dihydroorotate dehydrogenase |Lactococcus lactis, isozyme B [TaxId: 1358]
d1tdfa2 : (LEU121) (VAL132) [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |Thioredoxin reductase |Escherichia coli [TaxId: 562]
d1hx1a1 : (ASN174) (LYS188) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Heat shock protein 70kDa, ATPase fragment |Cow (Bos taurus) [TaxId: 9913]
d1c0mb2 : (GLN185) (HIS212) [view usage] : c.55.3.2 |Ribonuclease H-like motif |Ribonuclease H-like |Retroviral integrase, catalytic domain |Retroviral integrase, catalytic domain |Rous sarcoma virus RSV [TaxId: 11886]
d3vehb_ : (MET350) (ASP378) [view usage] : d.161.1.1 |ADC synthase |ADC synthase |ADC synthase |Salicylate synthase MbtI |Mycobacterium tuberculosis [TaxId: 1773]
d1t2ra_ : (PRO6) (SER29) [view usage] : b.34.14.1 |SH3-like barrel |PAZ domain |PAZ domain |Argonaute 2 |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d2avna1 : (TRP6) (GLU21) [view usage] : c.66.1.41 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |UbiE/COQ5-like |Hypothetical methyltransferase TM1389 |Thermotoga maritima [TaxId: 2336]
d2q62g_ : (SER192) (ASP220) [view usage] : c.23.5.4 |Flavodoxin-like |Flavoproteins |NADPH-dependent FMN reductase |automated matches |Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]
d2q01b_ : (SER208) (GLY244) [view usage] : c.1.9.0 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |automated matches |automated matches |Caulobacter vibrioides [TaxId: 190650]
d1opjb_ : (THR514) (LYS531) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Abelsone tyrosine kinase (abl) |Mouse (Mus musculus) [TaxId: 10090]
d1niki_ : (GLY53) (SER64) [view usage] : i.8.1.1 |RNA polymerase |RNA polymerase |RNA polymerase |Complete 12-subunit RNA polymerase II complex |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1mnga2 : (GLY100) (ARG127) [view usage] : d.44.1.1 |Fe,Mn superoxide dismutase (SOD), C-terminal domain |Fe,Mn superoxide dismutase (SOD), C-terminal domain |Fe,Mn superoxide dismutase (SOD), C-terminal domain |Mn superoxide dismutase (MnSOD) |Thermus thermophilus [TaxId: 274]
d4cfee2 : (SER261) (PHE273) [view usage] : d.37.1.1 |CBS-domain pair |CBS-domain pair |CBS-domain pair |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1fb1a_ : (LYS107) (LEU117) [view usage] : d.96.1.1 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |GTP cyclohydrolase I |GTP cyclohydrolase I |Human (Homo sapiens) [TaxId: 9606]
d1daxa_ : (GLU15) (SER43) [view usage] : d.58.1.4 |Ferredoxin-like |4Fe-4S ferredoxins |Single 4Fe-4S cluster ferredoxin |Ferredoxin I |Desulfovibrio africanus [TaxId: 873]
d1qgoa_ : (SER44) (GLY73) [view usage] : c.92.1.2 |Chelatase-like |Chelatase |Cobalt chelatase CbiK |Cobalt chelatase CbiK |Salmonella typhimurium [TaxId: 90371]
d3dlsa_ : (GLU986) (LYS998) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ap0a_ : (CYS60) (ASP78) [view usage] : b.34.13.2 |SH3-like barrel |Chromo domain-like |Chromo domain |Heterochromatin protein 1, HP1 |Mouse (Mus musculus), HP1 beta (MOD1, M31) [TaxId: 10090]
d3s90a1 : (THR6) (LYS35) [view usage] : a.24.9.1 |Four-helical up-and-down bundle |alpha-catenin/vinculin-like |alpha-catenin/vinculin |Vinculin |Human (Homo sapiens) [TaxId: 9606]
d2wbib2 : (GLY347) (GLY378) [view usage] : a.29.3.0 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2k7ha_ : (ASN128) (ASN157) [view usage] : d.129.3.1 |TBP-like |Bet v1-like |Pathogenesis-related protein 10 (PR10)-like |automated matches |Soybean (Glycine max) [TaxId: 3847]
d1yk3d_ : (ASP135) (LEU147) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Hypothetical protein Rv1347c/MT1389 |Mycobacterium tuberculosis [TaxId: 1773]
d2pnkh_ : (GLU177) (ARG214) [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
d2azxa1 : (PHE260) (ALA286) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Tryptophanyl-tRNA synthetase (TrpRS) |Human (Homo sapiens) [TaxId: 9606]
d1bwoa_ : (CYS3) (GLY19) [view usage] : a.52.1.1 |Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |Plant lipid-transfer and hydrophobic proteins |Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) |Wheat (Triticum aestivum), L. seeds [TaxId: 4565]
d1y8ca_ : (CYS3) (ASN36) [view usage] : c.66.1.43 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |CAC2371-like |Putative methyltransferase CAC2371 |Clostridium acetobutylicum [TaxId: 1488]
d1ui7a1 : (PHE297) (ALA308) [view usage] : b.30.2.1 |Supersandwich |Amine oxidase catalytic domain |Amine oxidase catalytic domain |Copper amine oxidase, domain 3 |Arthrobacter globiformis [TaxId: 1665]
d4ogqa_ : (VAL4) (SER23) [view usage] : f.21.1.2 |Heme-binding four-helical bundle |Transmembrane di-heme cytochromes |Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |automated matches |Nostoc sp. [TaxId: 103690]
d2nnya_ : (VAL415) (LEU433) [view usage] : a.4.5.21 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ets domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2o3ea_ : (ASP353) (GLY379) [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1m1qa_ : (LYS4) (GLY40) [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain |Shewanella oneidensis [TaxId: 70863]
d1s6ra_ : (ALA151) (LYS183) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]
d2ccaa1 : (ALA65) (THR85) [view usage] : a.93.1.0 |Heme-dependent peroxidases |Heme-dependent peroxidases |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d2yivx_ : (SER408) (GLY435) [view usage] : e.26.1.2 |Prismane protein-like |Prismane protein-like |Carbon monoxide dehydrogenase |Ni-containing carbon monoxide dehydrogenase |Carboxydothermus hydrogenoformans [TaxId: 129958]
d1s2ub_ : (LYS273) (LYS290) [view usage] : c.1.12.7 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |Phosphoenolpyruvate mutase/Isocitrate lyase-like |Phosphoenolpyruvate mutase |Blue mussel (Mytilus edulis) [TaxId: 6550]
d1g6oa_ : (LEU6) (LEU35) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Hexameric traffic ATPase, HP0525 |Helicobacter pylori [TaxId: 210]
d1yk3f_ : (LEU136) (LEU147) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Hypothetical protein Rv1347c/MT1389 |Mycobacterium tuberculosis [TaxId: 1773]
d1yqfc_ : (ASP147) (SER195) [view usage] : d.25.1.1 |Mitochondrial glycoprotein MAM33-like |Mitochondrial glycoprotein MAM33-like |Mitochondrial glycoprotein MAM33-like |Hypothetical protein Lmaj011689 |Leishmania major [TaxId: 5664]
d1aiha_ : (ALA258) (VAL281) [view usage] : d.163.1.1 |DNA breaking-rejoining enzymes |DNA breaking-rejoining enzymes |Lambda integrase-like, catalytic core |Integrase |Bacteriophage HP1 [TaxId: 10690]
d2wgqa4 : (LEU382) (THR393) [view usage] : b.30.2.1 |Supersandwich |Amine oxidase catalytic domain |Amine oxidase catalytic domain |Copper amine oxidase, domain 3 |Escherichia coli [TaxId: 562]
d1eh3a_ : (PRO167) (PHE190) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
d4m7xa_ : (VAL251) (HIS268) [view usage] : c.55.1.14 |Ribonuclease H-like motif |Actin-like ATPase domain |Fumble-like |automated matches |Staphylococcus aureus [TaxId: 196620]
d3o5ca1 : (PRO139) (VAL171) [view usage] : a.3.1.0 |Cytochrome c |Cytochrome c |automated matches |automated matches |Shewanella oneidensis [TaxId: 70863]
d3k9eb_ : (GLY293) (HIS311) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Escherichia coli [TaxId: 217992]
d1vbma_ : (ASN134) (LYS154) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |automated matches |Escherichia coli [TaxId: 562]
d3qyia_ : (SER206) (LEU242) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |MAP kinase Erk2 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1gvnd_ : (THR217) (LEU230) [view usage] : c.37.1.21 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Plasmid maintenance system epsilon/zeta, toxin zeta subunit |Plasmid maintenance system epsilon/zeta, toxin zeta subunit |Streptococcus pyogenes [TaxId: 1314]
d1v1ba_ : (SER193) (ALA210) [view usage] : c.72.1.1 |Ribokinase-like |Ribokinase-like |Ribokinase-like |2-keto-3-deoxygluconate kinase |Thermus thermophilus [TaxId: 274]
d2kqya_ : (ILE2) (SER13) [view usage] : a.39.1.4 |EF Hand-like |EF-hand |Parvalbumin |Parvalbumin |Chicken (Gallus gallus) [TaxId: 9031]
d2owsa_ : (SER263) (SER291) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Bordetella pertussis [TaxId: 257313]
d3lyna_ : (ASN12) (LEU42) [view usage] : a.19.1.1 |Fertilization protein |Fertilization protein |Fertilization protein |Lysin |Green abalone (Haliotis fulgens) [TaxId: 6456]
d2fsja1 : (LYS306) (SER325) [view usage] : c.55.1.12 |Ribonuclease H-like motif |Actin-like ATPase domain |Ta0583-like |Hypothetical protein Ta0583 |Thermoplasma acidophilum [TaxId: 2303]
d4jghb_ : (THR56) (ARG68) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4nhzb1 : (LEU-9) (ARG12) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Bradyrhizobium sp. [TaxId: 288000]
d1gvja_ : (ASP417) (LEU433) [view usage] : a.4.5.21 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ets domain |ETS-1 transcription factor, residues 331-440 |Human (Homo sapiens) [TaxId: 9606]
d1m1pa_ : (CYS75) (LEU89) [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain |Shewanella oneidensis [TaxId: 70863]
d3cw2c1 : (PRO42) (LYS59) [view usage] : b.40.4.5 |OB-fold |Nucleic acid-binding proteins |Cold shock DNA-binding domain-like |Eukaryotic initiation factor 2alpha, eIF2alpha, N-terminal domain |Sulfolobus solfataricus [TaxId: 2287]
d1yq9b_ : (THR27) (ILE36) [view usage] : e.19.1.1 |HydA/Nqo6-like |HydA/Nqo6-like |Nickel-iron hydrogenase, small subunit |automated matches |Desulfovibrio gigas [TaxId: 879]
d4h24d_ : (ALA78) (SER108) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
d1r9la_ : (HIS69) (PHE82) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glycine betaine-binding periplasmic protein ProX |Escherichia coli [TaxId: 562]
d1f9nb1 : (ASP67) (ARG78) [view usage] : a.4.5.3 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Arginine repressor (ArgR), N-terminal DNA-binding domain |Arginine repressor (ArgR), N-terminal DNA-binding domain |Bacillus subtilis [TaxId: 1423]
d1t6t2_ : (ASN96) (ASN113) [view usage] : c.136.1.1 |Toprim domain |Toprim domain |Toprim domain |Hypothetical protein aq_2086 |Aquifex aeolicus [TaxId: 63363]
d1md0a_ : (ASP417) (ASP434) [view usage] : a.4.5.21 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ets domain |ETS-1 transcription factor, residues 331-440 |Mouse (Mus musculus) [TaxId: 10090]
d1ylka_ : (CYS91) (GLY110) [view usage] : c.53.2.0 |Resolvase-like |beta-carbonic anhydrase, cab |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d1z4na_ : (ASP203) (LYS219) [view usage] : c.108.1.6 |HAD-like |HAD-like |beta-Phosphoglucomutase-like |beta-Phosphoglucomutase |Lactococcus lactis [TaxId: 1358]
d2j6lb_ : (PRO79) (GLY110) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1avka1 : (PHE297) (ALA308) [view usage] : b.30.2.1 |Supersandwich |Amine oxidase catalytic domain |Amine oxidase catalytic domain |Copper amine oxidase, domain 3 |Arthrobacter globiformis [TaxId: 1665]
d1d0na6 : (SER739) (ALA755) [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Gelsolin |Horse (Equus caballus) [TaxId: 9796]
d1nlma_ : (ARG164) (ALA178) [view usage] : c.87.1.2 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Peptidoglycan biosynthesis glycosyltransferase MurG |Peptidoglycan biosynthesis glycosyltransferase MurG |Escherichia coli [TaxId: 562]
d1ybaa1 : (ASN108) (GLY137) [view usage] : c.2.1.4 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Formate/glycerate dehydrogenases, NAD-domain |Phosphoglycerate dehydrogenase |Escherichia coli [TaxId: 562]
d4nhzh1 : (LEU-9) (ARG12) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Bradyrhizobium sp. [TaxId: 288000]
d1e1ea_ : (ALA42) (TYR80) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Plant beta-glucosidase (myrosinase) |Maize (Zea mays), zmglu1 [TaxId: 4577]
d1wyea_ : (GLY291) (LYS310) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
d4b15a_ : (ASP257) (ILE270) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Tamarindus indica [TaxId: 58860]
d4io8a1 : (ASN174) (THR188) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3j6vr_ : (LEU135) (SER155) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, mitochondrial (28S subunit) |Cow (Bos taurus) [TaxId: 9913]
d1gxpb_ : (SER175) (GLU207) [view usage] : a.4.6.1 |DNA/RNA-binding 3-helical bundle |C-terminal effector domain of the bipartite response regulators |PhoB-like |PhoB |Escherichia coli [TaxId: 562]
d1isfa_ : (VAL234) (HIS245) [view usage] : c.23.14.3 |Flavodoxin-like |N-(deoxy)ribosyltransferase-like |ADP ribosyl cyclase-like |Bone marror stromal cell antigen 1, BST-1/CD157 (ADP ribosyl cyclase-2) |Human (Homo sapiens) [TaxId: 9606]
d1r6za2 : (PRO153) (ASN184) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d2wmyc_ : (LEU107) (LEU146) [view usage] : c.44.1.0 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1wixa_ : (LEU8) (THR34) [view usage] : a.40.3.1 |CH domain-like |Hook domain |Hook domain |Hook homolog 1, Hook1 |Mouse (Mus musculus) [TaxId: 10090]
d1i6hi2 : (GLY53) (SER64) [view usage] : g.41.3.1 |Rubredoxin-like |Zinc beta-ribbon |Transcriptional factor domain |RBP9 subunit of RNA polymerase II |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1ewqa1 : (LEU478) (GLY541) [view usage] : a.113.1.1 |DNA repair protein MutS, domain III |DNA repair protein MutS, domain III |DNA repair protein MutS, domain III |DNA repair protein MutS, domain III |Thermus aquaticus [TaxId: 271]
d1mhsa_ : (GLY883) (GLN920) [view usage] : i.18.1.1 |Membrane ion ATPase |Membrane ion ATPase |Membrane ion ATPase |Proton ATPase |Fungus (Neurospora crassa) [TaxId: 5141]
d1nyec_ : (PHE456) (GLY492) [view usage] : d.227.1.1 |OsmC-like |OsmC-like |Ohr/OsmC resistance proteins |Osmotically inducible protein OsmC |Escherichia coli [TaxId: 562]
d1j36a_ : (PHE213) (SER275) [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |Angiotensin converting enzyme, ACE |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d3qimb_ : (ASN220) (ASN235) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Nickel-binding periplasmic protein NikA |Escherichia coli [TaxId: 562]
d1psda1 : (ARG110) (GLY137) [view usage] : c.2.1.4 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Formate/glycerate dehydrogenases, NAD-domain |Phosphoglycerate dehydrogenase |Escherichia coli [TaxId: 562]
d2pnkf_ : (GLU177) (ARG214) [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
d2q88a_ : (SER240) (ALA254) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]
d3ewma_ : (ASN138) (LEU156) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 53953]
d2wmyd_ : (LEU107) (LEU146) [view usage] : c.44.1.0 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1oyra1 : (SER84) (GLY108) [view usage] : d.14.1.4 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |Ribonuclease PH domain 1-like |Ribonuclease PH, domain 1 |Bacillus subtilis [TaxId: 1423]
d1djga1 : (GLU200) (ALA222) [view usage] : a.39.1.7 |EF Hand-like |EF-hand |EF-hand modules in multidomain proteins |Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1r6zz2 : (PRO153) (ASN184) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d3fe1c1 : (ASN176) (ARG190) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3dysa_ : (PHE254) (PHE277) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |High-affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, PDE9A |Human (Homo sapiens) [TaxId: 9606]
d3snpa2 : (THR867) (LYS889) [view usage] : c.8.2.0 |The "swivelling" beta/beta/alpha domain |LeuD/IlvD-like |automated matches |automated matches |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1xrea2 : (VAL102) (ARG127) [view usage] : d.44.1.0 |Fe,Mn superoxide dismutase (SOD), C-terminal domain |Fe,Mn superoxide dismutase (SOD), C-terminal domain |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d4r5lc2 : (GLU509) (ALA553) [view usage] : a.8.4.1 |immunoglobulin/albumin-binding domain-like |Heat shock protein 70kD (HSP70), C-terminal subdomain |Heat shock protein 70kD (HSP70), C-terminal subdomain |automated matches |Escherichia coli [TaxId: 83333]
d1u2wb_ : (ASP13) (ASP41) [view usage] : a.4.5.5 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ArsR-like transcriptional regulators |Cadmium efflux system accessory protein CadC |Staphylococcus aureus [TaxId: 1280]
d2i7na2 : (LEU576) (GLU590) [view usage] : c.55.1.14 |Ribonuclease H-like motif |Actin-like ATPase domain |Fumble-like |Pantothenate kinase 1, PANK1 |Human (Homo sapiens) [TaxId: 9606]
d3dj3b_ : (ASP40) (ILE55) [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1xaca_ : (PRO75) (ASP98) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |3-isopropylmalate dehydrogenase, IPMDH |Chimera (Thermus thermophilus) and (Bacillus subtilis) [TaxId: 274]
d2zxxa_ : (TYR95) (ASN157) [view usage] : h.1.28.1 |Parallel coiled-coil |Geminin coiled-coil domain |Geminin coiled-coil domain |Geminin coiled-coil domain |Mouse (Mus musculus) [TaxId: 10090]
d1irfa_ : (ASP51) (SER87) [view usage] : a.4.5.23 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Interferon regulatory factor |Interferon regulatory factor-2, IRF-2 |Mouse (Mus musculus) [TaxId: 10090]
d1al02_ : (GLU6) (ALA25) [view usage] : a.84.1.1 |Scaffolding protein gpD of bacteriophage procapsid |Scaffolding protein gpD of bacteriophage procapsid |Scaffolding protein gpD of bacteriophage procapsid |Scaffolding protein gpD of bacteriophage procapsid |Bacteriophage phi-X174 [TaxId: 10847]
d1u0bb2 : (ASP149) (ALA167) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Cysteinyl-tRNA synthetase (CysRS) |Escherichia coli [TaxId: 562]
d1y4ma1 : (MET50) (ASP90) [view usage] : h.3.2.1 |Stalk segment of viral fusion proteins |Virus ectodomain |Virus ectodomain |HERV-FRD_6p24.1 provirus ancestral Env polyprotein |Human (Homo sapiens) [TaxId: 9606]
d1xg7b_ : (GLU3) (VAL23) [view usage] : a.96.1.6 |DNA-glycosylase |DNA-glycosylase |AgoG-like |Hypothetical protein PF0904 |Pyrococcus furiosus [TaxId: 2261]
d2j0ge_ : (ASN71) (GLY87) [view usage] : d.171.1.0 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1v4aa1 : (GLU399) (LEU435) [view usage] : a.24.16.4 |Four-helical up-and-down bundle |Nucleotidyltransferase substrate binding subunit/domain |Glutamine synthase adenylyltransferase GlnE, domain 2 |Glutamine synthase adenylyltransferase GlnE, domain 2 |Escherichia coli [TaxId: 562]
d2q01a_ : (SER208) (GLY244) [view usage] : c.1.9.0 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |automated matches |automated matches |Caulobacter vibrioides [TaxId: 190650]
d4hbia_ : (SER2) (LYS23) [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin I |Ark clam (Scapharca inaequivalvis) [TaxId: 6561]
d1su6a_ : (SER408) (GLY435) [view usage] : e.26.1.2 |Prismane protein-like |Prismane protein-like |Carbon monoxide dehydrogenase |Ni-containing carbon monoxide dehydrogenase |Carboxydothermus hydrogenoformans [TaxId: 129958]
d1bcpc1 : (GLY140) (SER159) [view usage] : b.40.2.1 |OB-fold |Bacterial enterotoxins |Bacterial AB5 toxins, B-subunits |Pertussis toxin S2/S3 subunits, C-terminal domain |Bordetella pertussis [TaxId: 520]
d1p9ag_ : (ASN242) (TYR259) [view usage] : c.10.2.7 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Ngr ectodomain-like |von Willebrand factor binding domain of glycoprotein Ib alpha |Human (Homo sapiens) [TaxId: 9606]
d3ldla1 : (ASN200) (ARG214) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4lllo_ : (SER6) (TYR41) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
d1thma_ : (TYR13) (TRP24) [view usage] : c.41.1.1 |Subtilisin-like |Subtilisin-like |Subtilases |Thermitase |Thermoactinomyces vulgaris [TaxId: 2026]
d1sj2a1 : (TYR64) (THR85) [view usage] : a.93.1.3 |Heme-dependent peroxidases |Heme-dependent peroxidases |Catalase-peroxidase KatG |Catalase-peroxidase KatG |Mycobacterium tuberculosis [TaxId: 1773]
d1djna1 : (ARG322) (GLY337) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Trimethylamine dehydrogenase, N-terminal domain |Methylophilus methylotrophus, w3a1 [TaxId: 17]
d1cd32_ : (GLU6) (SER24) [view usage] : a.84.1.1 |Scaffolding protein gpD of bacteriophage procapsid |Scaffolding protein gpD of bacteriophage procapsid |Scaffolding protein gpD of bacteriophage procapsid |Scaffolding protein gpD of bacteriophage procapsid |Bacteriophage phi-X174 [TaxId: 10847]
d3a5zb2 : (ASP96) (TRP106) [view usage] : b.40.4.0 |OB-fold |Nucleic acid-binding proteins |automated matches |automated matches |Escherichia coli [TaxId: 562]
d2jv9a_ : (GLY4) (PRO47) [view usage] : a.40.1.0 |CH domain-like |Calponin-homology domain, CH-domain |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1czja_ : (ALA37) (HIS60) [view usage] : a.138.1.1 |Multiheme cytochromes |Multiheme cytochromes |Cytochrome c3-like |Cytochrome c3 |Desulfomicrobium norvegicum [TaxId: 52561]
d3bkka_ : (ALA216) (LEU240) [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |Angiotensin converting enzyme, ACE |Human (Homo sapiens) [TaxId: 9606]
d1egya_ : (PRO96) (GLY133) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450-ERYF |Saccharopolyspora erythraea [TaxId: 1836]
d2noxd_ : (SER184) (ASN229) [view usage] : a.266.1.0 |Indolic compounds 2,3-dioxygenase-like |Indolic compounds 2,3-dioxygenase-like |automated matches |automated matches |Cupriavidus metallidurans [TaxId: 119219]
d4iuaa2 : (MET156) (ARG169) [view usage] : g.14.1.1 |Kringle-like |Kringle-like |Kringle modules |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1q3ta_ : (ILE99) (ALA117) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |CMP kinase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1m39a_ : (PHE86) (ASP114) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Caltractin (centrin 2) |Human (Homo sapiens) [TaxId: 9606]
d2qeee_ : (GLU177) (ARG214) [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
d3edda2 : (ASP465) (ALA478) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Flavobacterium sp. [TaxId: 197856]
d1b97a_ : (ASN116) (ILE129) [view usage] : c.52.1.2 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease EcoRV |Restriction endonuclease EcoRV |Escherichia coli [TaxId: 562]
d1gdha1 : (VAL103) (ARG130) [view usage] : c.2.1.4 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Formate/glycerate dehydrogenases, NAD-domain |D-glycerate dehydrogenase |Hyphomicrobium methylovorum [TaxId: 84]
d3logd_ : (ARG349) (ASP378) [view usage] : d.161.1.1 |ADC synthase |ADC synthase |ADC synthase |Salicylate synthase MbtI |Mycobacterium tuberculosis [TaxId: 1773]
d2dcna1 : (GLY291) (GLU308) [view usage] : c.72.1.1 |Ribokinase-like |Ribokinase-like |Ribokinase-like |Hypothetical fructokinase ST2478 |Sulfolobus tokodaii [TaxId: 111955]
d1e3ma1 : (PRO504) (THR564) [view usage] : a.113.1.1 |DNA repair protein MutS, domain III |DNA repair protein MutS, domain III |DNA repair protein MutS, domain III |DNA repair protein MutS, domain III |Escherichia coli [TaxId: 562]
d3in1a_ : (GLY295) (GLU311) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1poy1_ : (ASN139) (THR149) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Spermidine/putrescine-binding protein PotD |Escherichia coli [TaxId: 562]
d1jwna_ : (VAL3) (LYS23) [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin I |Ark clam (Scapharca inaequivalvis) [TaxId: 6561]
d3szya_ : (ASN168) (LYS195) [view usage] : c.76.1.0 |Alkaline phosphatase-like |Alkaline phosphatase-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d4htla2 : (THR176) (HIS207) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Listeria monocytogenes [TaxId: 169963]
d1o6ua1 : (GLN50) (TRP74) [view usage] : a.5.3.1 |RuvA C-terminal domain-like |CRAL/TRIO N-terminal domain |CRAL/TRIO N-terminal domain |Supernatant protein factor (SPF), N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1bcpb1 : (GLY140) (GLY160) [view usage] : b.40.2.1 |OB-fold |Bacterial enterotoxins |Bacterial AB5 toxins, B-subunits |Pertussis toxin S2/S3 subunits, C-terminal domain |Bordetella pertussis [TaxId: 520]
d3ag7a_ : (SER550) (ILE571) [view usage] : a.2.3.0 |Long alpha-hairpin |Chaperone J-domain |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1wkpb_ : (ASP7) (LEU19) [view usage] : b.17.1.0 |PEBP-like |PEBP-like |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1d0qa_ : (GLU7) (GLY24) [view usage] : g.41.3.2 |Rubredoxin-like |Zinc beta-ribbon |DNA primase zinc finger |Zinc-binding domain of DNA primase |Bacillus stearothermophilus [TaxId: 1422]
d2m0ta_ : (ASP92) (ALA113) [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1wkpa_ : (PRO8) (LEU19) [view usage] : b.17.1.0 |PEBP-like |PEBP-like |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1xwob_ : (ASP18) (GLY53) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |automated matches |Anser anser [TaxId: 8844]
d2ez6a1 : (ALA84) (ILE93) [view usage] : a.149.1.1 |RNase III domain-like |RNase III domain-like |RNase III catalytic domain-like |RNase III endonuclease catalytic domain |Aquifex aeolicus [TaxId: 63363]
d4l35a_ : (VAL221) (THR240) [view usage] : f.13.1.0 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |automated matches |automated matches |Haloarcula vallismortis [TaxId: 28442]
d1ybja_ : (GLY152) (VAL174) [view usage] : d.35.1.1 |Heme-binding protein A (HasA) |Heme-binding protein A (HasA) |Heme-binding protein A (HasA) |Heme-binding protein A (HasA) |Serratia marcescens [TaxId: 615]
d1lfia1 : (PRO167) (PHE190) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
d1v7va2 : (GLN212) (GLY232) [view usage] : b.30.5.3 |Supersandwich |Galactose mutarotase-like |Glycosyltransferase family 36 N-terminal domain |Chitobiose phosphorylase ChbP |Vibrio proteolyticus [TaxId: 671]
d3h49a_ : (GLY295) (GLN308) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2okgb_ : (ALA88) (LEU105) [view usage] : c.124.1.8 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |SorC sugar-binding domain-like |Central glycolytic gene regulator CggR |Bacillus subtilis [TaxId: 1423]
d4qtbb_ : (LYS357) (GLY374) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2yhsa1 : (THR191) (LEU210) [view usage] : a.24.13.0 |Four-helical up-and-down bundle |Domain of the SRP/SRP receptor G-proteins |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d4iwna_ : (THR19) (SER35) [view usage] : c.66.1.14 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Hypothetical protein HI0319 (YecO) |automated matches |Escherichia coli [TaxId: 562]
d1d9ua_ : (ASN6) (VAL35) [view usage] : d.2.1.4 |Lysozyme-like |Lysozyme-like |Lambda lysozyme |Lambda lysozyme |Bacteriophage lambda [TaxId: 10710]
d1jr9a2 : (GLU100) (GLY125) [view usage] : d.44.1.1 |Fe,Mn superoxide dismutase (SOD), C-terminal domain |Fe,Mn superoxide dismutase (SOD), C-terminal domain |Fe,Mn superoxide dismutase (SOD), C-terminal domain |Mn superoxide dismutase (MnSOD) |Bacillus halodenitrificans [TaxId: 1482]
d3l6qa1 : (ASN190) (LYS204) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Cryptosporidium parvum [TaxId: 353152]
d1nyed_ : (PHE656) (GLY692) [view usage] : d.227.1.1 |OsmC-like |OsmC-like |Ohr/OsmC resistance proteins |Osmotically inducible protein OsmC |Escherichia coli [TaxId: 562]
d1xg7a_ : (SER1) (VAL23) [view usage] : a.96.1.6 |DNA-glycosylase |DNA-glycosylase |AgoG-like |Hypothetical protein PF0904 |Pyrococcus furiosus [TaxId: 2261]
d1f0ka_ : (ARG164) (ALA178) [view usage] : c.87.1.2 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Peptidoglycan biosynthesis glycosyltransferase MurG |Peptidoglycan biosynthesis glycosyltransferase MurG |Escherichia coli [TaxId: 562]
d1v7lb_ : (GLU138) (GLY158) [view usage] : c.8.2.1 |The "swivelling" beta/beta/alpha domain |LeuD/IlvD-like |LeuD-like |Isopropylmalate isomerase LeuD |Pyrococcus horikoshii [TaxId: 53953]
d1nyea_ : (PHE56) (GLY92) [view usage] : d.227.1.1 |OsmC-like |OsmC-like |Ohr/OsmC resistance proteins |Osmotically inducible protein OsmC |Escherichia coli [TaxId: 562]
d2hq8b_ : (GLU6) (LYS48) [view usage] : a.39.1.0 |EF Hand-like |EF-hand |automated matches |automated matches |Renilla muelleri [TaxId: 37510]
d2pnke_ : (GLU177) (ARG214) [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
d1prcl_ : (TRP259) (SER273) [view usage] : f.26.1.1 |Bacterial photosystem II reaction centre, L and M subunits |Bacterial photosystem II reaction centre, L and M subunits |Bacterial photosystem II reaction centre, L and M subunits |L (light) subunit |Rhodopseudomonas viridis [TaxId: 1079]
d3chqa1 : (SER495) (PRO513) [view usage] : a.118.1.7 |alpha-alpha superhelix |ARM repeat |Leukotriene A4 hydrolase C-terminal domain |Leukotriene A4 hydrolase C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1u2wc_ : (VAL17) (ALA40) [view usage] : a.4.5.5 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ArsR-like transcriptional regulators |Cadmium efflux system accessory protein CadC |Staphylococcus aureus [TaxId: 1280]
d1yk3h_ : (ASP135) (LEU147) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Hypothetical protein Rv1347c/MT1389 |Mycobacterium tuberculosis [TaxId: 1773]
d1u25c_ : (SER30) (GLU41) [view usage] : c.45.1.4 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Myo-inositol hexaphosphate phosphohydrolase (phytase) PhyA |Myo-inositol hexaphosphate phosphohydrolase (phytase) PhyA |Selenomonas ruminantium [TaxId: 971]
d1q23a_ : (HIS192) (GLU214) [view usage] : c.43.1.1 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |CAT-like |Chloramphenicol acetyltransferase, CAT |Escherichia coli [TaxId: 562]
d1b94a_ : (ASN116) (ILE129) [view usage] : c.52.1.2 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease EcoRV |Restriction endonuclease EcoRV |Escherichia coli [TaxId: 562]
d3ttka_ : (ASN141) (VAL161) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d1t92a_ : (GLY26) (VAL68) [view usage] : d.24.1.3 |Pili subunits |Pili subunits |Pseudopilin |Pullulanase secretion protein PulG |Klebsiella pneumoniae [TaxId: 573]
d4fbza_ : (VAL217) (ARG232) [view usage] : f.13.1.0 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |automated matches |automated matches |Haloterrigena thermotolerans [TaxId: 121872]
d1bw6a_ : (ASN48) (GLU56) [view usage] : a.4.1.7 |DNA/RNA-binding 3-helical bundle |Homeodomain-like |Centromere-binding |DNA-binding domain of centromere binding protein B (CENP-B) |Human (Homo sapiens) [TaxId: 9606]
d2irfg_ : (PRO53) (LEU88) [view usage] : a.4.5.23 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Interferon regulatory factor |Interferon regulatory factor-2, IRF-2 |Mouse (Mus musculus) [TaxId: 10090]
d4gvqa_ : (SER3) (ARG23) [view usage] : d.147.1.0 |Methenyltetrahydromethanopterin cyclohydrolase |Methenyltetrahydromethanopterin cyclohydrolase |automated matches |automated matches |Archaeoglobus fulgidus [TaxId: 224325]
d3fa3a_ : (THR271) (GLY292) [view usage] : c.1.12.0 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |automated matches |automated matches |Aspergillus niger [TaxId: 5061]
d2fxga1 : (ALA69) (MET88) [view usage] : a.93.1.3 |Heme-dependent peroxidases |Heme-dependent peroxidases |Catalase-peroxidase KatG |Catalase-peroxidase KatG |Burkholderia pseudomallei [TaxId: 28450]
d1g1ua_ : (LEU436) (LEU455) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Retinoid-X receptor alpha (RXR-alpha) |Human (Homo sapiens) [TaxId: 9606]
d2z36a_ : (ALA101) (THR140) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Nonomuraea recticatena [TaxId: 46178]
d1m1ra_ : (LYS4) (GLY40) [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain |Shewanella oneidensis [TaxId: 70863]
d3zp2e_ : (TRP126) (SER136) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza A virus [TaxId: 11320]
d1i4ga2 : (GLN153) (ASN171) [view usage] : d.15.6.1 |beta-Grasp (ubiquitin-like) |Superantigen toxins, C-terminal domain |Superantigen toxins, C-terminal domain |Staphylococcal enterotoxin A, SEA |Staphylococcus aureus [TaxId: 1280]
d3ttma_ : (PRO142) (VAL161) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d4m7ya_ : (VAL251) (GLU266) [view usage] : c.55.1.14 |Ribonuclease H-like motif |Actin-like ATPase domain |Fumble-like |automated matches |Staphylococcus aureus [TaxId: 196620]
d2zt9a_ : (ASN3) (SER23) [view usage] : f.21.1.2 |Heme-binding four-helical bundle |Transmembrane di-heme cytochromes |Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |automated matches |Nostoc sp. [TaxId: 103690]
d1qn0a_ : (LYS33) (ALA47) [view usage] : a.138.1.1 |Multiheme cytochromes |Multiheme cytochromes |Cytochrome c3-like |Cytochrome c3 |Desulfovibrio gigas [TaxId: 879]
d3q7va_ : (SER234) (ASN253) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Staphylococcus aureus [TaxId: 1280]
d4fw1b1 : (GLN185) (HIS212) [view usage] : c.55.3.2 |Ribonuclease H-like motif |Ribonuclease H-like |Retroviral integrase, catalytic domain |automated matches |Rous sarcoma virus [TaxId: 11888]
d1kdxa_ : (TRP591) (ILE611) [view usage] : a.12.1.1 |Kix domain of CBP (creb binding protein) |Kix domain of CBP (creb binding protein) |Kix domain of CBP (creb binding protein) |Kix domain of CBP (creb binding protein) |Mouse (Mus musculus) [TaxId: 10090]
d1e8cb1 : (ASN4) (PRO14) [view usage] : c.98.1.1 |MurF and HprK N-domain-like |MurE/MurF N-terminal domain |MurE/MurF N-terminal domain |UDP-N-acetylmuramyl tripeptide synthetase MurE |Escherichia coli [TaxId: 562]
d2czra1 : (GLY124) (TYR141) [view usage] : c.52.4.1 |Restriction endonuclease-like |TBP-interacting protein-like |TBP-interacting protein-like |TBP-interacting protein |Thermococcus kodakaraensis [TaxId: 311400]
d1dcqa2 : (ALA323) (ARG361) [view usage] : g.45.1.1 |ArfGap/RecO-like zinc finger |ArfGap/RecO-like zinc finger |Pyk2-associated protein beta ARF-GAP domain |Pyk2-associated protein beta ARF-GAP domain |Mouse (Mus musculus) [TaxId: 10090]
d1wkoa_ : (GLU10) (LEU22) [view usage] : b.17.1.1 |PEBP-like |PEBP-like |Phosphatidylethanolamine binding protein |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1nlze_ : (LEU25) (MSE42) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Hexameric traffic ATPase, HP0525 |Helicobacter pylori [TaxId: 210]
d2wbia2 : (GLY347) (GLY378) [view usage] : a.29.3.0 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.3, c.1, c.10, b.19, c.69, c.94, a.104, c.2, c.76, d.58, i.1, a.118, c.108, c.82, c.26, b.74, b.30, c.92, d.157, c.66,
d.92, c.77, c.124, c.45, a.93, a.127, a.211, d.129, c.72, c.23, d.144, b.40, c.37, c.47, c.55, d.2, d.171, d.14, c.87, f.26,
a.96, d.96, a.123, d.108, c.53, c.43, a.266, c.8, c.41, d.37, f.21, c.52, a.1, b.34, a.4, f.13, a.39, c.3, h.3, d.109,
a.138, e.26, d.44, a.3, d.15, a.29, e.19, i.8, d.227, a.40, a.24, c.136, c.98, b.17, c.44, b.36, d.24, a.149, d.25, g.41,
a.8, a.52, a.113, f.23, a.2, a.19, a.84, d.161, i.18, g.14, d.35, a.5, a.12, h.1, d.163, g.45, d.147, b.162