Tableau information
Concept source: d2o68a_ amino acid (a.a.) range (THR126)(VAL136)
nSSEs in this Concept: 2
String of secondary struct.elems. (SSEs) defining this concept: HE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR126) (LYS130) H1
(LYS132) (VAL136) E2
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -101.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.3° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3r34b_ : (THR29) (ASP39) [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |automated matches |Arthrobacter sp. [TaxId: 1667]
d2ejaa_ : (ASP5) (ARG25) [view usage] : c.1.22.0 |TIM beta/alpha-barrel |UROD/MetE-like |automated matches |automated matches |Aquifex aeolicus [TaxId: 63363]
d1oyya1 : (ARG499) (ALA511) [view usage] : a.4.5.43 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |RecQ helicase DNA-binding domain-like |DNA helicase RecQ DNA-binding domain |Escherichia coli [TaxId: 562]
d3qfcb1 : (GLN153) (GLY168) [view usage] : c.23.5.0 |Flavodoxin-like |Flavoproteins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2h0ha1 : (ASN62) (GLY93) [view usage] : c.47.1.9 |Thioredoxin fold |Thioredoxin-like |DsbC/DsbG C-terminal domain-like |Thiol:disulfide interchange protein DsbG, C-terminal domain |Escherichia coli [TaxId: 562]
d1ttna1 : (GLU81) (ILE93) [view usage] : d.15.1.1 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |Ubiquitin-related |Dendritic cell-derived ubiquitin-like protein |Human (Homo sapiens) [TaxId: 9606]
d1e1cb2 : (GLU495) (CYS517) [view usage] : c.23.6.1 |Flavodoxin-like |Cobalamin (vitamin B12)-binding domain |Cobalamin (vitamin B12)-binding domain |Methylmalonyl-CoA mutase beta subunit, C-terminal domain |Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
d3kk1a1 : (ARG78) (GLN91) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
d1zjda1 : (ASN73) (HIS91) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Coagulation factor XI |Human (Homo sapiens) [TaxId: 9606]
d1k4kd_ : (GLN143) (LEU171) [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |Nicotinamide mononucleotide (NMN) adenylyltransferase |Escherichia coli [TaxId: 562]
d1hxva_ : (VAL95) (LYS113) [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |Trigger factor PPIase domain |Mycoplasma genitalium [TaxId: 2097]
d3eaka_ : (SER111) (GLN120) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Camel (Camelus dromedarius) [TaxId: 9838]
d1e7kb_ : (ASP15) (GLY38) [view usage] : d.79.3.1 |Bacillus chorismate mutase-like |L30e-like |L30e/L7ae ribosomal proteins |Spliceosomal 15.5kd protein |Human (Homo sapiens) [TaxId: 9606]
d1pbua_ : (SER406) (LYS437) [view usage] : d.58.46.1 |Ferredoxin-like |eEF1-gamma domain |eEF1-gamma domain |Elongation factor 1-gamma C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d3ph5b_ : (ILE28) (SER43) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |beta-Lactoglobulin |Cow (Bos taurus) [TaxId: 9913]
d1m2ga_ : (GLU3) (THR19) [view usage] : c.31.1.5 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Sir2 family of transcriptional regulators |AF1676, Sir2 homolog (Sir2-AF1?) |Archaeoglobus fulgidus [TaxId: 2234]
d3o1aa_ : (PRO16) (THR45) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Actinoplanes teichomyceticus [TaxId: 1867]
d1gq6b_ : (GLY73) (GLY84) [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |Proclavaminate amidino hydrolase |Streptomyces clavuligerus [TaxId: 1901]
d1pp8m_ : (ASN48) (SER61) [view usage] : a.4.5.44 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |39 kda initiator binding protein, IBP39, N-terminal domain |39 kda initiator binding protein, IBP39, N-terminal domain |Trichomonas vaginalis [TaxId: 5722]
d4i26c_ : (GLU379) (GLN387) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
d1n73c1 : (ASP207) (GLY229) [view usage] : d.171.1.1 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domains |Sea lamprey (Petromyzon marinus), gamma [TaxId: 7757]
d3bwha_ : (ASN229) (ASN240) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |automated matches |Cushaw squash (Cucurbita moschata) [TaxId: 3662]
d2ewoh_ : (THR349) (PRO367) [view usage] : d.126.1.0 |Pentein, beta/alpha-propeller |Pentein |automated matches |automated matches |Streptococcus mutans [TaxId: 1309]
d1yhia_ : (SER2) (ASN23) [view usage] : d.22.1.1 |GFP-like |GFP-like |Fluorescent proteins |automated matches |Jellyfish (Aequorea victoria) [TaxId: 6100]
d3cqzk_ : (ASP5) (GLY15) [view usage] : d.74.3.2 |DCoH-like |RBP11-like subunits of RNA polymerase |RBP11/RpoL |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1i3qk_ : (ASP5) (GLU14) [view usage] : d.74.3.2 |DCoH-like |RBP11-like subunits of RNA polymerase |RBP11/RpoL |RPB11 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1xkna_ : (SER328) (PRO345) [view usage] : d.126.1.6 |Pentein, beta/alpha-propeller |Pentein |Porphyromonas-type peptidylarginine deiminase |Putative peptidyl-arginine deiminase |Chlorobium tepidum [TaxId: 1097]
d4utua_ : (HIS0) (GLN14) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Clostridium perfringens [TaxId: 195102]
d3bu7b_ : (PHE349) (ALA362) [view usage] : b.82.1.23 |Double-stranded beta-helix |RmlC-like cupins |Gentisate 1,2-dioxygenase-like |Gentisate 1,2-dioxygenase |Silicibacter pomeroyi [TaxId: 89184]
d1vbga2 : (ASN386) (LEU399) [view usage] : c.8.1.1 |The "swivelling" beta/beta/alpha domain |Phosphohistidine domain |Pyruvate phosphate dikinase, central domain |Pyruvate phosphate dikinase, central domain |Maize (Zea mays) [TaxId: 4577]
d2rhba2 : (PHE232) (GLY247) [view usage] : d.294.1.2 |EndoU-like |EndoU-like |Nsp15 C-terminal domain-like |Nsp15, C-terminal domain |SARS coronavirus [TaxId: 227859]
d1gisa_ : (GLY232) (ASN243) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |alpha-Trichosanthin |Mongolian snake gourd (Trichosanthes kirilowii Maxim.) [TaxId: 3677]
d1dt1a_ : (GLY41) (GLN57) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Cytochrome c552 |Thermus thermophilus [TaxId: 274]
d1amoa2 : (GLN150) (GLY165) [view usage] : c.23.5.2 |Flavodoxin-like |Flavoproteins |Cytochrome p450 reductase N-terminal domain-like |NADPH-cytochrome p450 reductase, N-terminal domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1a5ca_ : (PRO14) (ALA38) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Fructose-1,6-bisphosphate aldolase |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d1toua_ : (CYS1) (ASN15) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Adipocyte lipid-binding protein, ALBP |Human (Homo sapiens) [TaxId: 9606]
d4akpa3 : (ASP437) (ALA471) [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d3o82b_ : (SER352) (ILE364) [view usage] : e.23.1.0 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |automated matches |automated matches |Acinetobacter baumannii [TaxId: 557601]
d1jhda1 : (PRO18) (SER37) [view usage] : b.122.1.3 |PUA domain-like |PUA domain-like |ATP sulfurylase N-terminal domain |ATP sulfurylase N-terminal domain |Sulfur-oxidizing endosymbiont of Riftia pachyptila [TaxId: 35843]
d4i3xc_ : (ALA304) (THR332) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d2jmua1 : (VAL106) (ALA119) [view usage] : d.63.1.2 |CYTH-like phosphatases |CYTH-like phosphatases |CYTH domain |Thiamine-triphosphatase (ThTPase) |Mouse (Mus musculus) [TaxId: 10090]
d2d62a1 : (PRO80) (VAL89) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |automated matches |Pyrococcus horikoshii [TaxId: 53953]
d4wsha_ : (ARG8) (ARG27) [view usage] : c.1.22.1 |TIM beta/alpha-barrel |UROD/MetE-like |Uroporphyrinogen decarboxylase, UROD |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d3gvkb1 : (ASP254) (THR281) [view usage] : b.68.1.2 |6-bladed beta-propeller |Sialidases |Endo-alpha-sialidase |automated matches |Enterobacteria phage [TaxId: 344021]
d3gvva_ : (ASP17) (CYS35) [view usage] : c.1.22.1 |TIM beta/alpha-barrel |UROD/MetE-like |Uroporphyrinogen decarboxylase, UROD |Uroporphyrinogen decarboxylase, UROD |Human (Homo sapiens) [TaxId: 9606]
d3nfwa_ : (ASP93) (ASP104) [view usage] : b.45.1.0 |Split barrel-like |FMN-binding split barrel |automated matches |automated matches |Mycobacterium thermoresistibile [TaxId: 1078020]
d1uh2a3 : (PRO127) (PHE139) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Maltogenic amylase, central domain |Thermoactinomyces vulgaris, TVAI [TaxId: 2026]
d4g8zx_ : (PRO66) (ARG82) [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |automated matches |Pneumocystis jirovecii [TaxId: 42068]
d1yfja1 : (ASN236) (ASN259) [view usage] : c.66.1.28 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |N6 adenine-specific DNA methylase, DAM |DNA methylase T4DAM |Bacteriophage T4 [TaxId: 10665]
d3jz4a_ : (ALA379) (GLY388) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1no3a2 : (ASN151) (ALA163) [view usage] : b.12.1.1 |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Lipoxigenase N-terminal domain |Plant lipoxigenase |Soybean (Glycine max), isozyme L3 [TaxId: 3847]
d1pp7u_ : (PRO49) (SER61) [view usage] : a.4.5.44 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |39 kda initiator binding protein, IBP39, N-terminal domain |39 kda initiator binding protein, IBP39, N-terminal domain |Trichomonas vaginalis [TaxId: 5722]
d2dsof_ : (SER14) (PRO36) [view usage] : b.68.6.1 |6-bladed beta-propeller |Calcium-dependent phosphotriesterase |SGL-like |automated matches |Staphylococcus aureus [TaxId: 1280]
d2p4nb1 : (GLY81) (SER97) [view usage] : i.10.1.1 |Microtubule complexes |Microtubule complexes |Microtubule complexes |Tubulin:stathmin-like domain complex |Cow (Bos taurus) [TaxId: 9913]
d1o5la1 : (ASP2) (ARG16) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |CRP-like transcriptional regulator TM1171, N-terminal domain |Thermotoga maritima [TaxId: 2336]
d2bdua1 : (MSE13) (LYS24) [view usage] : c.108.1.21 |HAD-like |HAD-like |Pyrimidine 5'-nucleotidase (UMPH-1) |Cytosolic 5'-nucleotidase III |Mouse (Mus musculus) [TaxId: 10090]
d1jfra_ : (GLU238) (GLY256) [view usage] : c.69.1.16 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Lipase |Lipase |Streptomyces exfoliatus [TaxId: 1905]
d1vqwa2 : (GLY186) (SER201) [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |Flavin-dependent monoxygenase SPBP16F5.08c |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d3j6vp_ : (ASN69) (LYS85) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, mitochondrial (28S subunit) |Cow (Bos taurus) [TaxId: 9913]
d3w01a_ : (GLY-3) (ASP14) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |PcrB protein homolog YerE |Staphylococcus aureus [TaxId: 418127]
d4kttc2 : (PRO232) (GLN245) [view usage] : d.130.1.1 |S-adenosylmethionine synthetase |S-adenosylmethionine synthetase |S-adenosylmethionine synthetase |S-adenosylmethionine synthetase |Human (Homo sapiens), isoform type-2 [TaxId: 9606]
d1k8ga2 : (SER207) (ALA228) [view usage] : b.40.4.3 |OB-fold |Nucleic acid-binding proteins |Single strand DNA-binding domain, SSB |Telomere end binding protein alpha subunit |Oxytricha nova [TaxId: 200597]
d2j5ik_ : (ILE85) (ASN114) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
d3fz6e_ : (GLY247) (SER273) [view usage] : c.67.1.6 |PLP-dependent transferase-like |PLP-dependent transferases |Pyridoxal-dependent decarboxylase |Glutamate decarboxylase beta, GadB |Escherichia coli K-12 [TaxId: 83333]
d3fz6e_ : (GLY413) (ARG426) [view usage] : c.67.1.6 |PLP-dependent transferase-like |PLP-dependent transferases |Pyridoxal-dependent decarboxylase |Glutamate decarboxylase beta, GadB |Escherichia coli K-12 [TaxId: 83333]
d4i0cd_ : (MET109) (GLN118) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Camel (Camelus dromedarius) [TaxId: 9838]
d4utta_ : (MET1) (GLN14) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Clostridium perfringens [TaxId: 195102]
d1qhoa4 : (SER1) (ILE15) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Cyclodextrin glycosyltransferase |Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]
d2ejab_ : (ASP5) (ARG25) [view usage] : c.1.22.0 |TIM beta/alpha-barrel |UROD/MetE-like |automated matches |automated matches |Aquifex aeolicus [TaxId: 63363]
d4mfba1 : (GLU29) (GLY51) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
d1j42a_ : (SER57) (VAL69) [view usage] : c.23.16.2 |Flavodoxin-like |Class I glutamine amidotransferase-like |DJ-1/PfpI |DJ-1 |Human (Homo sapiens) [TaxId: 9606]
d3zfeb_ : (PRO147) (HIS162) [view usage] : b.121.4.0 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |automated matches |automated matches |Human enterovirus 71 [TaxId: 39054]
d1o9la1 : (THR163) (GLU191) [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Succinate:CoA transferase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
d2ew0a1 : (ASN133) (ASP148) [view usage] : d.310.1.1 |VC0467-like |VC0467-like |VC0467-like |Hypothetical protein ACIAD0353 |Acinetobacter sp. ADP1 [TaxId: 62977]
d3bu7a1 : (PHE349) (ALA362) [view usage] : b.82.1.23 |Double-stranded beta-helix |RmlC-like cupins |Gentisate 1,2-dioxygenase-like |Gentisate 1,2-dioxygenase |Silicibacter pomeroyi [TaxId: 89184]
d3qimb_ : (ILE454) (SER476) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Nickel-binding periplasmic protein NikA |Escherichia coli [TaxId: 562]
d1wica_ : (ALA112) (SER138) [view usage] : b.1.11.2 |Immunoglobulin-like beta-sandwich |PapD-like |MSP-like |MSP domain containing protein 2, Mospd2 |Mouse (Mus musculus) [TaxId: 10090]
d2wefa_ : (PRO101) (ASP117) [view usage] : e.7.1.1 |Carbohydrate phosphatase |Carbohydrate phosphatase |Inositol monophosphatase/fructose-1,6-bisphosphatase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2cnaa_ : (SER134) (GLY144) [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Concanavalin A |Jack bean (Canavalia ensiformis) [TaxId: 3823]
d1z45a1 : (GLN675) (SER699) [view usage] : b.30.5.4 |Supersandwich |Galactose mutarotase-like |Aldose 1-epimerase (mutarotase) |Galactose mutarotase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4i3xb_ : (ALA304) (THR332) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d1q23j_ : (LYS19) (VAL37) [view usage] : c.43.1.1 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |CAT-like |Chloramphenicol acetyltransferase, CAT |Escherichia coli [TaxId: 562]
d1izka3 : (SER338) (ASP351) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Maltogenic amylase, central domain |Thermoactinomyces vulgaris, TVAI [TaxId: 2026]
d2fxta1 : (PRO249) (GLU267) [view usage] : d.17.4.13 |Cystatin-like |NTF2-like |TIM44-like |Translocase of inner mitochondrial membrane TIMM44 (TIM44), C-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1ggga_ : (THR167) (GLY177) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamine-binding protein |Escherichia coli [TaxId: 562]
d3pfka_ : (TYR41) (GLU53) [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |ATP-dependent phosphofructokinase |Bacillus stearothermophilus [TaxId: 1422]
d1j9za2 : (GLN150) (GLY165) [view usage] : c.23.5.2 |Flavodoxin-like |Flavoproteins |Cytochrome p450 reductase N-terminal domain-like |NADPH-cytochrome p450 reductase, N-terminal domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4l4pa_ : (TYR17) (ALA25) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Caldicellulosiruptor bescii [TaxId: 521460]
d1psea_ : (SER15) (SER26) [view usage] : b.34.4.2 |SH3-like barrel |Electron transport accessory proteins |Photosystem I accessory protein E (PsaE) |Photosystem I accessory protein E (PsaE) |Synechococcus sp., pcc 7002 [TaxId: 1131]
d1ewya1 : (THR1) (LYS24) [view usage] : b.43.4.2 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |Ferredoxin reductase FAD-binding domain-like |Ferredoxin reductase (flavodoxin reductase) N-terminal domain |Anabaena sp., pcc 7119 [TaxId: 1167]
d1k4ka_ : (GLN143) (LEU171) [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |Nicotinamide mononucleotide (NMN) adenylyltransferase |Escherichia coli [TaxId: 562]
d2d0fa3 : (PRO127) (PHE139) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Thermoactinomyces vulgaris [TaxId: 2026]
d2q6za_ : (ASP17) (CYS35) [view usage] : c.1.22.1 |TIM beta/alpha-barrel |UROD/MetE-like |Uroporphyrinogen decarboxylase, UROD |Uroporphyrinogen decarboxylase, UROD |Human (Homo sapiens) [TaxId: 9606]
d2vx7a_ : (THR395) (GLU411) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]
d2f90a_ : (GLU109) (PRO124) [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1m2ja_ : (ASP2) (THR19) [view usage] : c.31.1.5 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Sir2 family of transcriptional regulators |AF1676, Sir2 homolog (Sir2-AF1?) |Archaeoglobus fulgidus [TaxId: 2234]
d1i2ka_ : (HIS112) (LEU125) [view usage] : e.17.1.1 |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |Aminodeoxychorismate lyase |Escherichia coli [TaxId: 562]
d2r49a_ : (GLN43) (LYS64) [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |Bacillus 1-3,1-4-beta-glucanase |Fibrobacter succinogenes [TaxId: 833]
d1f0xa2 : (PHE251) (GLU271) [view usage] : d.145.1.1 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |FAD-linked oxidases, N-terminal domain |D-lactate dehydrogenase |Escherichia coli [TaxId: 562]
d1ag4a_ : (VAL41) (PRO55) [view usage] : b.11.1.1 |gamma-Crystallin-like |gamma-Crystallin-like |Crystallins/Ca-binding development proteins |Spherulin 3a (S3a) |Slime mold (Physarum polycephalum) [TaxId: 5791]
d3cyva_ : (TYR9) (MET25) [view usage] : c.1.22.1 |TIM beta/alpha-barrel |UROD/MetE-like |Uroporphyrinogen decarboxylase, UROD |Uroporphyrinogen decarboxylase, UROD |Shigella flexneri [TaxId: 623]
d4i0cc_ : (MET109) (GLN118) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Camel (Camelus dromedarius) [TaxId: 9838]
d2ftxb1 : (ASN156) (ASP173) [view usage] : d.300.1.2 |Kinetochore globular domain-like |Kinetochore globular domain |Spc24-like |Kinetochore protein Spc24 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4xiaa_ : (LEU264) (PRO288) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Arthrobacter, strain b3728 [TaxId: 1663]
d4uttc_ : (MET1) (GLN14) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Clostridium perfringens [TaxId: 195102]
d1tbda_ : (LYS100) (GLU117) [view usage] : d.89.1.1 |Origin of replication-binding domain, RBD-like |Origin of replication-binding domain, RBD-like |The origin DNA-binding domain of SV40 T-antigen |The origin DNA-binding domain of SV40 T-antigen |Simian virus 40, Sv40 [TaxId: 10633]
d1b93c_ : (SER129) (LEU139) [view usage] : c.24.1.2 |Methylglyoxal synthase-like |Methylglyoxal synthase-like |Methylglyoxal synthase, MgsA |Methylglyoxal synthase, MgsA |Escherichia coli [TaxId: 562]
d1epwa3 : (LYS54) (ASN66) [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |Botulinum neurotoxin |Clostridium botulinum, serotype B [TaxId: 1491]
d2hxfb1 : (GLY81) (SER97) [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |Tubulin beta-subunit |Pig (Sus scrofa) [TaxId: 9823]
d1vyja2 : (THR185) (ASN200) [view usage] : d.131.1.2 |DNA clamp |DNA clamp |DNA polymerase processivity factor |Proliferating cell nuclear antigen (PCNA) |Human (Homo sapiens) [TaxId: 9606]
d3av8a_ : (ASP66) (CYS78) [view usage] : d.15.4.1 |beta-Grasp (ubiquitin-like) |2Fe-2S ferredoxin-like |2Fe-2S ferredoxin-related |automated matches |Aphanothece sacrum [TaxId: 1122]
d1wkma2 : (GLU246) (VAL267) [view usage] : a.4.5.25 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Methionine aminopeptidase, insert domain |Methionine aminopeptidase, insert domain |Pyrococcus furiosus [TaxId: 2261]
d1jffb1 : (GLY81) (SER97) [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |Tubulin beta-subunit |Cow (Bos taurus) [TaxId: 9913]
d4lrua_ : (PRO153) (PHE163) [view usage] : c.23.16.2 |Flavodoxin-like |Class I glutamine amidotransferase-like |DJ-1/PfpI |automated matches |Candida albicans [TaxId: 237561]
d1xrba2 : (PRO212) (ASN225) [view usage] : d.130.1.1 |S-adenosylmethionine synthetase |S-adenosylmethionine synthetase |S-adenosylmethionine synthetase |S-adenosylmethionine synthetase |Escherichia coli [TaxId: 562]
d2vqua5 : (GLU502) (HIS511) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Five-domain beta-mannosidase, domain 3 |Bacteroides thetaiotaomicron [TaxId: 818]
d2a5za1 : (SER30) (PHE55) [view usage] : b.29.1.24 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |SO2946-like |Hypothetical protein SO2946 |Shewanella oneidensis [TaxId: 70863]
d1w7ja1 : (ALA3) (ASP17) [view usage] : b.34.3.1 |SH3-like barrel |Myosin S1 fragment, N-terminal domain |Myosin S1 fragment, N-terminal domain |Myosin S1 fragment, N-terminal domain |Chicken (Gallus gallus), Va isoform [TaxId: 9031]
d1k8gb2 : (SER207) (ALA228) [view usage] : b.40.4.3 |OB-fold |Nucleic acid-binding proteins |Single strand DNA-binding domain, SSB |Telomere end binding protein alpha subunit |Oxytricha nova [TaxId: 200597]
d1oaod_ : (SER532) (PRO552) [view usage] : e.26.1.3 |Prismane protein-like |Prismane protein-like |Acetyl-CoA synthase |Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) alpha (ACS) subunit |Moorella thermoacetica [TaxId: 1525]
d4glqa_ : (TRP499) (THR512) [view usage] : d.110.2.0 |Profilin-like |GAF domain-like |automated matches |automated matches |Thermosynechococcus elongatus [TaxId: 197221]
d3r34a_ : (THR29) (ASP39) [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |automated matches |Arthrobacter sp. [TaxId: 1667]
d1r57a_ : (GLU85) (LEU95) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Hypothetical protein SA2309 |Staphylococcus aureus [TaxId: 1280]
d1czva_ : (GLY10) (SER20) [view usage] : b.18.1.2 |Galactose-binding domain-like |Galactose-binding domain-like |Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) |C2 domain of factor V |Human (Homo sapiens) [TaxId: 9606]
d1k3eb_ : (THR105) (GLU143) [view usage] : d.198.1.1 |Secretion chaperone-like |Type III secretory system chaperone-like |Type III secretory system chaperone |Secretion chaperone CesT |Escherichia coli [TaxId: 562]
d1qy3a_ : (PRO75) (LYS101) [view usage] : d.22.1.1 |GFP-like |GFP-like |Fluorescent proteins |Green fluorescent protein, GFP |Jellyfish (Aequorea victoria) [TaxId: 6100]
d1ilfa_ : (SER82) (PRO100) [view usage] : b.54.1.1 |Core binding factor beta, CBF |Core binding factor beta, CBF |Core binding factor beta, CBF |Core binding factor beta, CBF |Mouse (Mus musculus) [TaxId: 10090]
d4i3ta_ : (ALA304) (THR332) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d2a5zc_ : (PRO31) (PHE55) [view usage] : b.29.1.24 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |SO2946-like |Hypothetical protein SO2946 |Shewanella oneidensis [TaxId: 70863]
d1e7ka_ : (ASP15) (GLY38) [view usage] : d.79.3.1 |Bacillus chorismate mutase-like |L30e-like |L30e/L7ae ribosomal proteins |Spliceosomal 15.5kd protein |Human (Homo sapiens) [TaxId: 9606]
d1ibqa_ : (PRO46) (PRO58) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Acid protease |Fungus (Aspergillus phoenicis), aspergillopepsin [TaxId: 5063]
d1ogca_ : (ASN86) (SER97) [view usage] : c.133.1.1 |RbsD-like |RbsD-like |RbsD-like |Ribose transport protein RbsD |Bacillus subtilis [TaxId: 1423]
d1tisa_ : (GLN3) (ILE27) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Bacteriophage T4 [TaxId: 10665]
d3eq5a_ : (MET136) (VAL148) [view usage] : a.6.1.4 |Putative DNA-binding domain |Putative DNA-binding domain |Dachshund-homology domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3hyla3 : (PRO605) (GLU615) [view usage] : c.48.1.0 |TK C-terminal domain-like |TK C-terminal domain-like |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
d1q23a_ : (LYS19) (VAL37) [view usage] : c.43.1.1 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |CAT-like |Chloramphenicol acetyltransferase, CAT |Escherichia coli [TaxId: 562]
d1g0va_ : (SER61) (TYR75) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Acid protease |Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]
d2b3xa2 : (TRP66) (LYS79) [view usage] : c.83.1.1 |Aconitase iron-sulfur domain |Aconitase iron-sulfur domain |Aconitase iron-sulfur domain |Iron-responsive element binding protein 1, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d3rrla_ : (THR125) (GLU135) [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Helicobacter pylori [TaxId: 210]
d1vp4a_ : (LEU25) (PHE36) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Putative aminotransferase TM1131 |Thermotoga maritima [TaxId: 2336]
d3dmba_ : (LYS5) (LEU25) [view usage] : b.45.1.0 |Split barrel-like |FMN-binding split barrel |automated matches |automated matches |Xanthomonas campestris [TaxId: 340]
d2j5ih_ : (ILE85) (ASN114) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
d2g19a_ : (ASP335) (PRO347) [view usage] : b.82.2.15 |Double-stranded beta-helix |Clavaminate synthase-like |proly-4-hydroxylase (P4H, PHD) like |HIF-P4H2, PHD2 |Human (Homo sapiens) [TaxId: 9606]
d1zvya1 : (ASP110) (GLN119) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Camelid IG heavy chain variable domain, VHh |Camel (Camelus dromedarius) [TaxId: 9838]
d1mq8b_ : (ASP249) (GLY260) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |Integrin CD11a/CD18 (Leukocyte function associated antigen-1, LFA-1) |Human (Homo sapiens) [TaxId: 9606]
d4imha_ : (GLN221) (ASP238) [view usage] : e.62.1.0 |Heme iron utilization protein-like |Heme iron utilization protein-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d1ix5a_ : (HIS136) (GLU151) [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |Archaeal FKBP |Methanococcus thermolithotrophicus [TaxId: 2186]
d3w02b_ : (ALA0) (ASP14) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |PcrB protein homolog YerE |Staphylococcus aureus [TaxId: 418127]
d1k6db_ : (THR125) (ASP137) [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Acetate:CoA transferase alpha |Escherichia coli [TaxId: 562]
d2r6ga2 : (PRO71) (VAL80) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Maltose transport protein MalK, N-terminal domain |Escherichia coli [TaxId: 562]
d4om7a_ : (PHE718) (LEU735) [view usage] : c.23.2.1 |Flavodoxin-like |Toll/Interleukin receptor TIR domain |Toll/Interleukin receptor TIR domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2nl8a_ : (GLU229) (GLU245) [view usage] : d.89.1.1 |Origin of replication-binding domain, RBD-like |Origin of replication-binding domain, RBD-like |The origin DNA-binding domain of SV40 T-antigen |The origin DNA-binding domain of SV40 T-antigen |Simian virus 40, Sv40 [TaxId: 10633]
d4a3sa_ : (TYR41) (LEU54) [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |automated matches |Bacillus subtilis [TaxId: 1423]
d3zgoc_ : (ASP294) (ASP310) [view usage] : c.31.1.5 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Sir2 family of transcriptional regulators |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3r36b_ : (THR29) (ASP39) [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |automated matches |Arthrobacter sp. [TaxId: 1667]
d2h0ia1 : (ASN62) (GLY93) [view usage] : c.47.1.9 |Thioredoxin fold |Thioredoxin-like |DsbC/DsbG C-terminal domain-like |Thiol:disulfide interchange protein DsbG, C-terminal domain |Escherichia coli [TaxId: 562]
d1m2ka_ : (GLU3) (THR19) [view usage] : c.31.1.5 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Sir2 family of transcriptional regulators |AF1676, Sir2 homolog (Sir2-AF1?) |Archaeoglobus fulgidus [TaxId: 2234]
d1qyza_ : (GLY41) (GLN57) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Cytochrome c552 |Thermus thermophilus [TaxId: 274]
d1prtb2 : (GLY77) (MET89) [view usage] : d.169.1.2 |C-type lectin-like |C-type lectin-like |Aerolysin/Pertussis toxin (APT) domain |Pertussis toxin, S2/S3 subunits, N-terminal domain |Bordetella pertussis [TaxId: 520]
d4rnsa_ : (PHE255) (PRO265) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Sphingobium chlorophenolicum [TaxId: 46429]
d1v0ea1 : (ALA256) (THR281) [view usage] : b.68.1.2 |6-bladed beta-propeller |Sialidases |Endo-alpha-sialidase |Endo-alpha-sialidase |Bacteriophage K1F [TaxId: 344021]
d1ji1a3 : (PRO127) (PHE139) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Maltogenic amylase, central domain |Thermoactinomyces vulgaris, TVAI [TaxId: 2026]
d4tu1a_ : (SER24) (ALA48) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Toxoplasma gondii [TaxId: 5811]
d2pmpa_ : (ASP141) (LYS159) [view usage] : d.79.5.1 |Bacillus chorismate mutase-like |IpsF-like |IpsF-like |2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1axja_ : (THR5) (THR20) [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |FMN-binding protein |Desulfovibrio vulgaris, strain Miyazaki F [TaxId: 881]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, e.8, c.1, b.82, c.67, c.69, c.94, a.104, d.58, i.1, c.108, b.29, c.82, c.26, b.30, b.47, d.117, c.66, d.92, c.124,
c.14, c.42, d.165, b.50, c.23, b.40, c.37, c.47, c.89, d.171, b.60, b.18, d.169, b.121, c.60, c.32, c.31, e.62, e.17, c.62,
b.6, c.71, b.122, e.7, b.1, e.23, d.126, b.45, d.108, d.110, c.43, c.8, d.17, d.38, c.133, d.79, c.24, d.131, b.34, a.4,
d.145, c.3, c.48, e.26, b.11, i.10, a.3, d.15, d.63, b.43, d.74, d.89, d.26, d.130, c.83, d.198, b.12, a.6, d.310, d.22,
d.294, b.54, d.300