Tableau information
Concept source: d4ahja_ amino acid (a.a.) range (LYS50)(SER74)
nSSEs in this Concept: 2
String of secondary struct.elems. (SSEs) defining this concept: HE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS50) (ASN59) H1
(ASN68) (SER74) E2
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 123.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1p6ta1 : (GLY56) (VAL72) [view usage] : d.58.17.1 |Ferredoxin-like |HMA, heavy metal-associated domain |HMA, heavy metal-associated domain |Potential copper-translocating P-type ATPase CopA (YvgX) |Bacillus subtilis [TaxId: 1423]
d2q9pa_ : (ASP109) (TRP119) [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |Diphosphoinositol polyphosphate phosphohydrolase |Human (Homo sapiens) [TaxId: 9606]
d4k4ua_ : (ASP213) (ASP233) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Human poliovirus 1 [TaxId: 12081]
d3fhua_ : (ALA156) (ASN180) [view usage] : d.24.1.1 |Pili subunits |Pili subunits |Pilin |automated matches |Salmonella typhi [TaxId: 601]
d2dyja1 : (GLU66) (PRO89) [view usage] : d.52.7.1 |Alpha-lytic protease prodomain-like |Ribosome-binding factor A, RbfA |Ribosome-binding factor A, RbfA |Ribosome-binding factor A, RbfA |Thermus thermophilus [TaxId: 274]
d2xhva_ : (SER196) (ARG222) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Hepatitis C virus [TaxId: 11103]
d1gbja_ : (LEU231) (GLY245) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |alpha-Lytic protease |Lysobacter enzymogenes, 495 [TaxId: 69]
d1gxqa_ : (GLY210) (SER226) [view usage] : a.4.6.1 |DNA/RNA-binding 3-helical bundle |C-terminal effector domain of the bipartite response regulators |PhoB-like |PhoB |Escherichia coli [TaxId: 562]
d2r5nb3 : (THR529) (ALA547) [view usage] : c.48.1.1 |TK C-terminal domain-like |TK C-terminal domain-like |Transketolase C-terminal domain-like |Transketolase (TK), C-domain |Escherichia coli [TaxId: 562]
d2trcp_ : (ALA177) (GLY194) [view usage] : c.47.1.6 |Thioredoxin fold |Thioredoxin-like |Phosducin |Phosducin |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1iq4a_ : (ASN2) (ASP42) [view usage] : d.77.1.1 |RL5-like |RL5-like |Ribosomal protein L5 |Ribosomal protein L5 |Bacillus stearothermophilus [TaxId: 1422]
d3b8hb_ : (VAL419) (THR442) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Exotoxin A, C-terminal domain |Pseudomonas aeruginosa [TaxId: 287]
d1gxpe_ : (GLY210) (SER226) [view usage] : a.4.6.1 |DNA/RNA-binding 3-helical bundle |C-terminal effector domain of the bipartite response regulators |PhoB-like |PhoB |Escherichia coli [TaxId: 562]
d1ce2a1 : (GLN146) (PRO159) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Domestic water buffalo (Bubalus arnee bubalis) [TaxId: 89462]
d2vd7a_ : (THR155) (GLU169) [view usage] : b.82.2.14 |Double-stranded beta-helix |Clavaminate synthase-like |Histone demethylase core |JMJD2A core |Human (Homo sapiens) [TaxId: 9606]
d4e6pa_ : (SER237) (ASP251) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d1sgca_ : (VAL231) (LEU242) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Protease A |Streptomyces griseus, strain k1 [TaxId: 1911]
d1jxaa2 : (LEU196) (GLU208) [view usage] : d.153.1.1 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Class II glutamine amidotransferases |Glucosamine 6-phosphate synthase, N-terminal domain |Escherichia coli [TaxId: 562]
d1cvwh_ : (ILE235) (PRO255) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Coagulation factor VIIa |Human (Homo sapiens) [TaxId: 9606]
d3fe2a_ : (GLU72) (GLY86) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4iqqa_ : (GLN29) (GLY61) [view usage] : d.117.1.0 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |automated matches |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d1yf5l2 : (ILE44) (ALA58) [view usage] : c.55.1.11 |Ribonuclease H-like motif |Actin-like ATPase domain |Cyto-EpsL domain |Cytoplasmic domain of general secretion pathway protein L, EpsL |Vibrio cholerae [TaxId: 666]
d2zitb_ : (VAL419) (THR442) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Exotoxin A, C-terminal domain |Pseudomonas aeruginosa [TaxId: 287]
d3pu5a_ : (LYS123) (ARG145) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Bordetella parapertussis [TaxId: 519]
d1cpma_ : (ARG191) (LEU207) [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |Bacillus 1-3,1-4-beta-glucanase |Bacillus macerans [TaxId: 44252]
d3gz4b_ : (GLY227) (GLN241) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Escherichia coli [TaxId: 217992]
d3om5a_ : (ILE76) (ASP95) [view usage] : b.67.2.2 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |Levansucrase |Levansucrase |Bacillus megaterium [TaxId: 1404]
d1zagc2 : (ASP62) (PHE101) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Zinc-alpha-2-glycoprotein, ZAG |Human (Homo sapiens) [TaxId: 9606]
d4dc9d_ : (GLU86) (GLY105) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |DNA repair protein Rad51, catalytic domain |Methanococcus voltae [TaxId: 2188]
d1z5fa_ : (LEU40) (SER59) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |automated matches |Bullfrog (Rana catesbeiana) [TaxId: 8400]
d2ajta1 : (ASP434) (ALA456) [view usage] : b.43.2.2 |Reductase/isomerase/elongation factor common domain |FucI/AraA C-terminal domain-like |AraA C-terminal domain-like |L-arabinose isomerase AraA |Escherichia coli [TaxId: 562]
d1ynya2 : (ASN296) (CYS317) [view usage] : c.1.9.6 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Hydantoinase (dihydropyrimidinase), catalytic domain |D-hydantoinase |Bacillus sp. AR9 [TaxId: 301298]
d2c8fe_ : (VAL180) (ALA195) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |automated matches |Clostridium botulinum [TaxId: 1491]
d1exzc_ : (VAL412) (LYS431) [view usage] : a.26.1.2 |4-helical cytokines |4-helical cytokines |Short-chain cytokines |Stem cell factor, SCF |Human (Homo sapiens) [TaxId: 9606]
d3zzfb_ : (ASP204) (ILE214) [view usage] : c.73.1.0 |Carbamate kinase-like |Carbamate kinase-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3fz2c_ : (PRO96) (ALA107) [view usage] : d.323.1.1 |Phage tail protein-like |Phage tail protein-like |Lambda phage gpU-like |automated matches |Enterobacteria phage [TaxId: 10710]
d2ijd12 : (ASP396) (ASP416) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Poliovirus type 1, strain Mahoney [TaxId: 12080]
d1ltle_ : (PRO61) (GLY90) [view usage] : b.40.4.11 |OB-fold |Nucleic acid-binding proteins |DNA replication initiator (cdc21/cdc54) N-terminal domain |DNA replication initiator (cdc21/cdc54) N-terminal domain |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1kohb_ : (LYS205) (GLY231) [view usage] : c.10.2.3 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |mRNA export factor tap |mRNA export factor tap |Human (Homo sapiens) [TaxId: 9606]
d3k6ua_ : (MET107) (THR128) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Methanosarcina acetivorans [TaxId: 2214]
d1xoca1 : (ARG463) (PRO496) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Oligo-peptide binding protein (OPPA) |Bacillus subtilis [TaxId: 1423]
d4mmpa_ : (LYS198) (LEU208) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Pasteurella multocida [TaxId: 1169409]
d1qhma_ : (ALA1508) (GLY1528) [view usage] : c.7.1.1 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |PFL-like |Pyruvate formate-lyase, PFL |Escherichia coli [TaxId: 562]
d1uyqa1 : (TYR432) (ARG448) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Beta-glucosidase A |Bacillus polymyxa [TaxId: 1406]
d2ykma1 : (GLN394) (ASN418) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |automated matches |Human immunodeficiency virus type 1 bh10 [TaxId: 11678]
d3meda1 : (GLN394) (ASN418) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |automated matches |Hiv-1 m:b_hxb2r [TaxId: 11706]
d2bh1a2 : (ILE44) (ALA58) [view usage] : c.55.1.11 |Ribonuclease H-like motif |Actin-like ATPase domain |Cyto-EpsL domain |automated matches |Vibrio cholerae [TaxId: 666]
d1nnsa_ : (ASP138) (ASN151) [view usage] : c.88.1.1 |Glutaminase/Asparaginase |Glutaminase/Asparaginase |Glutaminase/Asparaginase |Asparaginase type II |Escherichia coli [TaxId: 562]
d2p0wa_ : (GLY61) (GLY68) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Histone acetyltransferase HAT1 |Human (Homo sapiens) [TaxId: 9606]
d3tpfa2 : (ASP244) (CYS260) [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d3mvga_ : (ASP234) (ARG251) [view usage] : d.165.1.0 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |automated matches |automated matches |Iris hollandica [TaxId: 35876]
d1gx5a_ : (SER196) (ARG222) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Hepatitis C virus [TaxId: 11103]
d1jiha2 : (PHE34) (GLN55) [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |DNA polymerase eta |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1cpna_ : (ARG189) (LEU205) [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |Bacillus 1-3,1-4-beta-glucanase |Bacillus macerans [TaxId: 44252]
d3eyza2 : (LEU630) (TYR654) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |DNA polymerase I (Klenow fragment) |Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId: 1422]
d2hfqa1 : (ASP65) (LYS80) [view usage] : d.375.1.1 |NE1680-like |NE1680-like |NE1680-like |Hypothetical protein NE1680 |Nitrosomonas europaea [TaxId: 915]
d2x8rb_ : (THR147) (TYR172) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Aspergillus fumigatus [TaxId: 330879]
d2zkib_ : (ASP66) (PRO79) [view usage] : c.23.5.0 |Flavodoxin-like |Flavoproteins |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 111955]
d1zaga2 : (ASP62) (ARG100) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Zinc-alpha-2-glycoprotein, ZAG |Human (Homo sapiens) [TaxId: 9606]
d1s28a_ : (GLY1) (GLU25) [view usage] : d.198.1.1 |Secretion chaperone-like |Type III secretory system chaperone-like |Type III secretory system chaperone |AvrPphF ORF1, chaperone of AvrPphF ORF2 |Pseudomonas syringae pv. phaseolicola [TaxId: 319]
d1xx3a_ : (PRO164) (VAL176) [view usage] : d.212.1.2 |TolA/TonB C-terminal domain |TolA/TonB C-terminal domain |TonB |TonB |Escherichia coli [TaxId: 562]
d4jula_ : (GLU131) (ASN150) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
d4esob_ : (THR195) (ALA218) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d3c2wa1 : (PRO196) (ASP213) [view usage] : d.110.2.1 |Profilin-like |GAF domain-like |GAF domain |Bacteriophytochrome BphP |Pseudomonas aeruginosa [TaxId: 287]
d1kfva2 : (LEU3) (THR28) [view usage] : b.113.1.1 |N-terminal domain of MutM-like DNA repair proteins |N-terminal domain of MutM-like DNA repair proteins |N-terminal domain of MutM-like DNA repair proteins |DNA repair protein MutM (Fpg) |Lactococcus lactis [TaxId: 1358]
d3awda_ : (SER237) (ASP251) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Gluconobacter oxydans [TaxId: 442]
d2y0aa_ : (TYR128) (ASP139) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2quoa_ : (LEU211) (SER228) [view usage] : b.18.1.37 |Galactose-binding domain-like |Galactose-binding domain-like |Clostridium perfringens enterotoxin (CPE), C-terminal domain |Clostridium perfringens enterotoxin (CPE), C-terminal domain |Clostridium perfringens [TaxId: 1502]
d2chda_ : (SER490) (ASN503) [view usage] : b.7.1.0 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1gbaa_ : (LEU231) (GLY245) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |alpha-Lytic protease |Lysobacter enzymogenes, 495 [TaxId: 69]
d2wo3a_ : (ASP107) (GLU128) [view usage] : b.18.1.4 |Galactose-binding domain-like |Galactose-binding domain-like |Ephrin receptor ligand binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3mvgb_ : (ASP234) (ARG249) [view usage] : d.165.1.0 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |automated matches |automated matches |Iris hollandica [TaxId: 35876]
d1t7va2 : (ASP62) (ARG100) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Zinc-alpha-2-glycoprotein, ZAG |Human (Homo sapiens) [TaxId: 9606]
d2i4qa_ : (SER64) (SER79) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Chymosin (synonym: renin) |Human (Homo sapiens) [TaxId: 9606]
d3tsca_ : (SER253) (ASP267) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Mycobacterium avium [TaxId: 1770]
d3pboa1 : (GLY177) (LEU221) [view usage] : d.175.1.0 |Penicillin binding protein dimerisation domain |Penicillin binding protein dimerisation domain |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d2pntb_ : (HIS168) (GLU185) [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1twye_ : (GLY129) (ARG149) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |ABC transporter, periplasmic substrate-binding protein VCA0807 |Vibrio cholerae [TaxId: 666]
d4dmma_ : (ASP229) (ASP243) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Synechococcus elongatus [TaxId: 1140]
d1k2wa_ : (THR236) (ASP250) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Sorbitol dehydrogenase |Rhodobacter sphaeroides [TaxId: 1063]
d4pqwa_ : (THR71) (LEU89) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1tuba2 : (SER287) (ALA314) [view usage] : d.79.2.1 |Bacillus chorismate mutase-like |Tubulin C-terminal domain-like |Tubulin, C-terminal domain |Tubulin alpha-subunit |Pig (Sus scrofa) [TaxId: 9823]
d2dt8a_ : (ALA262) (SER279) [view usage] : c.119.1.0 |DAK1/DegV-like |DAK1/DegV-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d2r96a_ : (PRO62) (THR75) [view usage] : c.23.5.8 |Flavodoxin-like |Flavoproteins |WrbA-like |Trp repressor binding protein WrbA |Escherichia coli [TaxId: 562]
d1fgua2 : (ILE405) (SER426) [view usage] : b.40.4.3 |OB-fold |Nucleic acid-binding proteins |Single strand DNA-binding domain, SSB |Replication protein A 70 KDa subunit (RPA70) |Human (Homo sapiens) [TaxId: 9606]
d3rglb_ : (THR2) (MSE27) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |automated matches |Campylobacter jejuni [TaxId: 197]
d4ffva1 : (ASN90) (SER106) [view usage] : b.70.3.1 |8-bladed beta-propeller |DPP6 N-terminal domain-like |DPP6 N-terminal domain-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1s16a1 : (THR1278) (GLN1325) [view usage] : d.14.1.3 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |DNA gyrase/MutL, second domain |Topoisomerase IV subunit B |Escherichia coli [TaxId: 562]
d2c5wb1 : (ASP273) (ASN301) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |Penicillin-binding protein 1a, transpeptidase domain |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1wu7b2 : (PRO17) (PRO45) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |Histidyl-tRNA synthetase (HisRS) |Thermoplasma acidophilum [TaxId: 2303]
d1hwoa_ : (ASN232) (PHE247) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Ebulin A-chain |Sambucus ebulus [TaxId: 28503]
d4df3a_ : (LEU217) (VAL230) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Aeropyrum pernix [TaxId: 56636]
d3bs8a_ : (CYS252) (LYS268) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |automated matches |Bacillus subtilis [TaxId: 1423]
d1h19a3 : (THR237) (PRO262) [view usage] : d.92.1.13 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Zn aminopeptidase catalytic domain |Leukotriene A4 hydrolase catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d1zjya1 : (SER231) (ASP245) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |R-specific alcohol dehydrogenase |Lactobacillus brevis [TaxId: 1580]
d2k2na1 : (GLU89) (ASP105) [view usage] : d.110.2.1 |Profilin-like |GAF domain-like |GAF domain |Sensor protein CYB2465 |Synechococcus sp. [TaxId: 1131]
d3so4a2 : (SER201) (ASN232) [view usage] : d.130.1.0 |S-adenosylmethionine synthetase |S-adenosylmethionine synthetase |automated matches |automated matches |Entamoeba (Entamoeba histolytica) [TaxId: 5759]
d4i5ea_ : (SER229) (ASP243) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Ralstonia sp. [TaxId: 517192]
d1vl8b_ : (SER235) (ASP249) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Gluconate 5-dehydrogenase |Thermotoga maritima [TaxId: 2336]
d4iawc_ : (ASN96) (VAL110) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Neutrophil gelatinase-associated lipocalin (NGAL) |Human (Homo sapiens) [TaxId: 9606]
d3lupa_ : (GLY263) (PRO280) [view usage] : c.119.1.0 |DAK1/DegV-like |DAK1/DegV-like |automated matches |automated matches |Streptococcus agalactiae [TaxId: 208435]
d1uu2a_ : (TYR14) (ALA25) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Histidinol-phosphate aminotransferase HisC |Thermotoga maritima [TaxId: 2336]
d2dlsa_ : (HIS66) (THR82) [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1e7pb2 : (LEU80) (PRO93) [view usage] : d.15.4.2 |beta-Grasp (ubiquitin-like) |2Fe-2S ferredoxin-like |2Fe-2S ferredoxin domains from multidomain proteins |Fumarate reductase iron-sulfur protein, N-terminal domain |Wolinella succinogenes [TaxId: 844]
d2cfoa1 : (THR129) (ILE145) [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Synechococcus elongatus [TaxId: 32046]
d3b78b_ : (THR418) (THR442) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Exotoxin A, C-terminal domain |Pseudomonas aeruginosa [TaxId: 287]
d2op5a1 : (ILE88) (ARG105) [view usage] : d.58.4.22 |Ferredoxin-like |Dimeric alpha+beta barrel |Marine metagenome family DABB1 |Hypothetical protein GOS_7213774 |Environmental samples
d1kohd_ : (LYS205) (GLY231) [view usage] : c.10.2.3 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |mRNA export factor tap |mRNA export factor tap |Human (Homo sapiens) [TaxId: 9606]
d1gzfc_ : (SER207) (PRO218) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Exoenzyme c3 |Clostridium botulinum [TaxId: 1491]
d4n5ma_ : (SER226) (ASN240) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Ralstonia eutropha [TaxId: 381666]
d3i41a_ : (GLU203) (GLY220) [view usage] : d.151.1.0 |DNase I-like |DNase I-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 561307]
d2yzma1 : (GLU47) (GLU60) [view usage] : c.30.1.0 |PreATP-grasp domain |PreATP-grasp domain |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d2bgca2 : (ALA5) (HIS23) [view usage] : b.82.3.3 |Double-stranded beta-helix |cAMP-binding domain-like |Listeriolysin regulatory protein PrfA, N-terminal domain |automated matches |Listeria monocytogenes [TaxId: 169963]
d4fs3a_ : (SER235) (ASP249) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Staphylococcus aureus [TaxId: 282458]
d1me6a_ : (SER63) (VAL78) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Plasmepsin (a hemoglobin-degrading enzyme) |Plasmodium falciparum, plasmepsin II [TaxId: 5833]
d1gxpb_ : (GLY210) (SER226) [view usage] : a.4.6.1 |DNA/RNA-binding 3-helical bundle |C-terminal effector domain of the bipartite response regulators |PhoB-like |PhoB |Escherichia coli [TaxId: 562]
d3d32a_ : (PHE13) (LYS37) [view usage] : d.15.1.3 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |GABARAP-like |GABA(A) receptor associated protein GABARAP |Human (Homo sapiens) [TaxId: 9606]
d1h16a_ : (ALA508) (GLY528) [view usage] : c.7.1.1 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |PFL-like |Pyruvate formate-lyase, PFL |Escherichia coli [TaxId: 562]
d1k82a2 : (GLU2) (ASN29) [view usage] : b.113.1.1 |N-terminal domain of MutM-like DNA repair proteins |N-terminal domain of MutM-like DNA repair proteins |N-terminal domain of MutM-like DNA repair proteins |DNA repair protein MutM (Fpg) |Escherichia coli [TaxId: 562]
d2wfca_ : (LEU141) (TYR153) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Arenicola marina [TaxId: 6344]
d3cgwa_ : (SER174) (GLY190) [view usage] : c.143.1.1 |CofD-like |CofD-like |CofD-like |LPPG:FO 2-phospho-L-lactate transferase CofD |Methanosarcina mazei [TaxId: 2209]
d4f7wd_ : (PHE1218) (ASP1230) [view usage] : c.37.1.6 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Phosphoribulokinase/pantothenate kinase |automated matches |Klebsiella pneumoniae [TaxId: 507522]
d1nekb2 : (PRO78) (ARG92) [view usage] : d.15.4.2 |beta-Grasp (ubiquitin-like) |2Fe-2S ferredoxin-like |2Fe-2S ferredoxin domains from multidomain proteins |Succinate dehydogenase iron-sulfur protein, N-terminal domain |Escherichia coli [TaxId: 562]
d1f4ba_ : (LYS2) (GLY31) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Escherichia coli [TaxId: 562]
d3ivva_ : (ARG138) (GLN165) [view usage] : b.8.1.1 |TRAF domain-like |TRAF domain-like |MATH domain |Speckle-type poz protein SPOP |Human (Homo sapiens) [TaxId: 9606]
d1fgub2 : (PRO406) (SER426) [view usage] : b.40.4.3 |OB-fold |Nucleic acid-binding proteins |Single strand DNA-binding domain, SSB |Replication protein A 70 KDa subunit (RPA70) |Human (Homo sapiens) [TaxId: 9606]
d4obca_ : (SER196) (ARG222) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Hepatitis c virus jfh-1 [TaxId: 356411]
d2x8ra_ : (THR147) (TYR172) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Aspergillus fumigatus [TaxId: 330879]
d1lp8a_ : (GLN238) (GLY251) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Dianthin 30 |Clove pink (Dianthus caryophyllus) [TaxId: 3570]
d2zc5b_ : (ASP273) (ASN301) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1fvaa_ : (THR102) (PHE121) [view usage] : d.58.28.1 |Ferredoxin-like |Peptide methionine sulfoxide reductase |Peptide methionine sulfoxide reductase |Peptide methionine sulfoxide reductase |Cow (Bos taurus) [TaxId: 9913]
d1g8sa_ : (ILE213) (GLY225) [view usage] : c.66.1.3 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Fibrillarin homologue |Fibrillarin homologue |Methanococcus jannaschii [TaxId: 2190]
d3f3hb_ : (ASP3) (PHE19) [view usage] : b.1.21.1 |Immunoglobulin-like beta-sandwich |Fungal immunomodulatory protein, FIP |Fungal immunomodulatory protein, FIP |automated matches |Ganoderma lucidum [TaxId: 5315]
d3wmxa_ : (ASP57) (LEU76) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Ralstonia eutropha [TaxId: 381666]
d4k8ba_ : (LEU13) (ASN27) [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |Hepatitis C virus [TaxId: 11103]
d4k8ub_ : (ARG296) (SER316) [view usage] : b.8.1.0 |TRAF domain-like |TRAF domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2r8ob3 : (THR529) (ALA547) [view usage] : c.48.1.1 |TK C-terminal domain-like |TK C-terminal domain-like |Transketolase C-terminal domain-like |Transketolase (TK), C-domain |Escherichia coli [TaxId: 562]
d2ftna_ : (LYS2) (GLY31) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Escherichia coli [TaxId: 562]
d1oaoc_ : (PRO139) (GLY161) [view usage] : e.26.1.3 |Prismane protein-like |Prismane protein-like |Acetyl-CoA synthase |Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) alpha (ACS) subunit |Moorella thermoacetica [TaxId: 1525]
d4bkma_ : (ALA64) (SER88) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2wqta_ : (LEU205) (GLY231) [view usage] : d.177.1.1 |FAH |FAH |FAH |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1oeya_ : (MSE410) (TRP425) [view usage] : d.15.2.2 |beta-Grasp (ubiquitin-like) |CAD & PB1 domains |PB1 domain |Neutrophil cytosol factor 2 (p67phox component of NADPH oxidase) |Human (Homo sapiens) [TaxId: 9606]
d1v57a2 : (PRO4) (LYS19) [view usage] : d.17.3.1 |Cystatin-like |DsbC/DsbG N-terminal domain-like |DsbC/DsbG N-terminal domain-like |Thiol:disulfide interchange protein DsbG, N-terminal domain |Escherichia coli [TaxId: 562]
d1dqna_ : (PRO9) (ALA36) [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Guanine PRTase |Giardia intestinalis [TaxId: 5741]
d11asa_ : (ALA4) (GLN33) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |Asparagine synthetase |Escherichia coli [TaxId: 562]
d4adba_ : (GLU81) (ASN103) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Escherichia coli [TaxId: 511693]
d2beoa2 : (ASN2) (LYS24) [view usage] : b.82.3.3 |Double-stranded beta-helix |cAMP-binding domain-like |Listeriolysin regulatory protein PrfA, N-terminal domain |automated matches |Listeria monocytogenes [TaxId: 169963]
d1qmgd2 : (GLY265) (ILE273) [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Class II ketol-acid reductoisomerase (KARI) |Spinach (Spinacia oleracea) [TaxId: 3562]
d1tuee_ : (GLU175) (GLY194) [view usage] : b.91.1.1 |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |Human papillomavirus type 18 [TaxId: 333761]
d2rfta_ : (GLN106) (LEU119) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza b virus (strain b/hong kong/8/73) [TaxId: 11531]
d2ktbb_ : (SER178) (SER213) [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1s2nb_ : (ASP161) (SER181) [view usage] : c.41.1.0 |Subtilisin-like |Subtilisin-like |automated matches |automated matches |Vibrio sp. [TaxId: 210249]
d1u5tc2 : (SER127) (THR150) [view usage] : a.4.5.54 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Vacuolar sorting protein domain |Vacuolar protein sorting-associated protein VPS25 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4bofc_ : (LEU319) (ARG336) [view usage] : d.126.1.0 |Pentein, beta/alpha-propeller |Pentein |automated matches |automated matches |Streptococcus pyogenes [TaxId: 1314]
d4is3a_ : (SER230) (ASP244) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Clostridium scindens [TaxId: 29347]
d1exzb_ : (VAL212) (LYS231) [view usage] : a.26.1.2 |4-helical cytokines |4-helical cytokines |Short-chain cytokines |Stem cell factor, SCF |Human (Homo sapiens) [TaxId: 9606]
d3cxma_ : (CYS346) (ASN369) [view usage] : c.18.1.0 |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase-like |automated matches |automated matches |Leishmania naiffi [TaxId: 5678]
d3dj3a_ : (THR89) (LEU108) [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3nyib_ : (ILE271) (ARG288) [view usage] : c.119.1.0 |DAK1/DegV-like |DAK1/DegV-like |automated matches |automated matches |Eubacterium ventriosum [TaxId: 411463]
d4f2da2 : (ASP434) (ALA456) [view usage] : b.43.2.0 |Reductase/isomerase/elongation factor common domain |FucI/AraA C-terminal domain-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1ddlc_ : (THR61) (LEU71) [view usage] : b.121.4.6 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Tymoviridae-like VP |Tymovirus coat protein |DYMV (Desmodium yellow mottle tymovirus) [TaxId: 70821]
d3sfub_ : (ASP357) (GLN386) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Murine norovirus 1 [TaxId: 223997]
d3so4d2 : (SER201) (ASN232) [view usage] : d.130.1.0 |S-adenosylmethionine synthetase |S-adenosylmethionine synthetase |automated matches |automated matches |Entamoeba (Entamoeba histolytica) [TaxId: 5759]
d3tpfb2 : (ASP244) (CYS260) [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d4bcua_ : (ASN46) (VAL68) [view usage] : b.121.7.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Satellite viruses |Satellite viruses |STNV coat protein |Satellite tobacco necrosis virus [TaxId: 12881]
d1tzoa2 : (ILE207) (SER221) [view usage] : b.179.1.1 |Anthrax protective antigen N-terminal-like |PA14-like |PA14 |PA14 |Bacillus anthracis
d2od4a1 : (ILE75) (LYS94) [view usage] : d.58.4.20 |Ferredoxin-like |Dimeric alpha+beta barrel |Marine metagenome family DABB2 |Hypothetical protein GOS_3280838 |Environmental samples
d1dmle1 : (GLU82) (GLY93) [view usage] : d.131.1.2 |DNA clamp |DNA clamp |DNA polymerase processivity factor |UL42 |Human herpesvirus type 1 [TaxId: 10298]
d2r5na3 : (THR529) (ALA547) [view usage] : c.48.1.1 |TK C-terminal domain-like |TK C-terminal domain-like |Transketolase C-terminal domain-like |Transketolase (TK), C-domain |Escherichia coli [TaxId: 562]
d1qi7a_ : (GLN237) (GLY250) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Saporin So6 |Common soapwort (Saponaria officinalis) [TaxId: 3572]
d1qgda3 : (THR529) (ALA547) [view usage] : c.48.1.1 |TK C-terminal domain-like |TK C-terminal domain-like |Transketolase C-terminal domain-like |Transketolase (TK), C-domain |Escherichia coli [TaxId: 562]
d3l3ma2 : (GLU183) (SER203) [view usage] : d.166.1.2 |ADP-ribosylation |ADP-ribosylation |Poly(ADP-ribose) polymerase, C-terminal domain |Poly(ADP-ribose) polymerase, C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d3s4tb_ : (TRP148) (PRO165) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |automated matches |Polaromonas sp. [TaxId: 296591]
d3pdqb_ : (THR155) (GLU169) [view usage] : b.82.2.14 |Double-stranded beta-helix |Clavaminate synthase-like |Histone demethylase core |JMJD2A core |Human (Homo sapiens) [TaxId: 9606]
d2xuma_ : (ASN166) (GLY190) [view usage] : b.82.2.6 |Double-stranded beta-helix |Clavaminate synthase-like |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Human (Homo sapiens) [TaxId: 9606]
d1k7ya3 : (CYS1042) (GLY1065) [view usage] : d.173.1.1 |Methionine synthase activation domain-like |Methionine synthase activation domain-like |Methionine synthase SAM-binding domain |Methionine synthase SAM-binding domain |Escherichia coli [TaxId: 562]
d1z4ra1 : (PRO634) (LEU655) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Catalytic domain of GCN5 histone acetyltransferase |Human (Homo sapiens) [TaxId: 9606]
d3b82b_ : (VAL419) (THR442) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Exotoxin A, C-terminal domain |Pseudomonas aeruginosa [TaxId: 287]
d1s2na_ : (ASP161) (SER181) [view usage] : c.41.1.0 |Subtilisin-like |Subtilisin-like |automated matches |automated matches |Vibrio sp. [TaxId: 210249]
d1cm0a_ : (PRO629) (LEU650) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Histone acetyltransferase domain of P300/CBP associating factor, PCAF |Human (Homo sapiens) [TaxId: 9606]
d3bfia_ : (LYS2) (GLY31) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Escherichia coli [TaxId: 562]
d3eo8a_ : (THR93) (LYS108) [view usage] : d.90.1.0 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d4lt7a_ : (SER490) (ASN503) [view usage] : b.7.1.0 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3ps4d_ : (HIS1033) (THR1050) [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2biba2 : (THR148) (ASN165) [view usage] : d.157.1.8 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Pce catalytic domain-like |Teichoic acid phosphorylcholine esterase Pce (LytD), N-terminal domain |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1fuga1 : (ILE64) (SER99) [view usage] : d.130.1.1 |S-adenosylmethionine synthetase |S-adenosylmethionine synthetase |S-adenosylmethionine synthetase |S-adenosylmethionine synthetase |Escherichia coli [TaxId: 562]
d2zkub_ : (SER196) (ARG222) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Hepatitis C virus [TaxId: 11103]
d3ruib_ : (LYS13) (LYS35) [view usage] : d.15.1.3 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |GABARAP-like |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d2qmmb_ : (ASP171) (HIS195) [view usage] : c.116.1.7 |alpha/beta knot |alpha/beta knot |AF1056-like |Uncharacterized protein AF1056 |Archaeoglobus fulgidus [TaxId: 2234]
d1ss6a_ : (ALA52) (ASP69) [view usage] : d.245.1.1 |NSFL1 (p97 ATPase) cofactor p47, SEP domain |NSFL1 (p97 ATPase) cofactor p47, SEP domain |NSFL1 (p97 ATPase) cofactor p47, SEP domain |NSFL1 (p97 ATPase) cofactor p47, SEP domain |Human (Homo sapiens) [TaxId: 9606]
d1fvga_ : (THR102) (PHE121) [view usage] : d.58.28.1 |Ferredoxin-like |Peptide methionine sulfoxide reductase |Peptide methionine sulfoxide reductase |Peptide methionine sulfoxide reductase |Cow (Bos taurus) [TaxId: 9913]
d1tueg_ : (GLU175) (GLY194) [view usage] : b.91.1.1 |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |Human papillomavirus type 18 [TaxId: 333761]
d2z17a_ : (THR84) (GLU102) [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3nela2 : (PRO131) (ILE164) [view usage] : d.104.1.0 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |automated matches |automated matches |Thermococcus kodakarensis [TaxId: 311400]
d1mjib_ : (ALA6) (GLY42) [view usage] : d.77.1.1 |RL5-like |RL5-like |Ribosomal protein L5 |Ribosomal protein L5 |Thermus thermophilus [TaxId: 274]
d1nt2a_ : (LEU195) (PHE210) [view usage] : c.66.1.3 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Fibrillarin homologue |Fibrillarin homologue |Archaeoglobus fulgidus [TaxId: 2234]
d1vtz0_ : (ASN46) (VAL68) [view usage] : b.121.7.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Satellite viruses |Satellite viruses |STNV coat protein |Satellite tobacco necrosis virus [TaxId: 12881]
d2h0hb2 : (PRO4) (LYS19) [view usage] : d.17.3.1 |Cystatin-like |DsbC/DsbG N-terminal domain-like |DsbC/DsbG N-terminal domain-like |Thiol:disulfide interchange protein DsbG, N-terminal domain |Escherichia coli [TaxId: 562]
d4wfxa_ : (ASP213) (TYR234) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Coxsackievirus b3 [TaxId: 103903]
d3s8rb_ : (ARG674) (PRO691) [view usage] : d.153.1.2 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Penicillin acylase, catalytic domain |Cephalosporin acylase |Pseudomonas sp., glutarylamidase [TaxId: 306]
d1ygea2 : (LEU71) (GLU86) [view usage] : b.12.1.1 |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Lipoxigenase N-terminal domain |Plant lipoxigenase |Soybean (Glycine max), isozyme L1 [TaxId: 3847]
d2ohdb_ : (VAL119) (ARG139) [view usage] : d.58.21.0 |Ferredoxin-like |Molybdenum cofactor biosynthesis protein C, MoaC |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
d3b7sa3 : (THR237) (PRO262) [view usage] : d.92.1.13 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Zn aminopeptidase catalytic domain |Leukotriene A4 hydrolase catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d1cu1a1 : (LEU13) (ASN27) [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |NS3 protease |Human hepatitis C virus (HCV), different isolates [TaxId: 11103]
d2ikua_ : (SER64) (SER79) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Chymosin (synonym: renin) |Human (Homo sapiens) [TaxId: 9606]
d2z8yo_ : (PRO139) (GLY161) [view usage] : e.26.1.3 |Prismane protein-like |Prismane protein-like |Acetyl-CoA synthase |automated matches |Moorella thermoacetica [TaxId: 1525]
d3fz2e_ : (PRO96) (ALA107) [view usage] : d.323.1.1 |Phage tail protein-like |Phage tail protein-like |Lambda phage gpU-like |automated matches |Enterobacteria phage [TaxId: 10710]
d1qqia_ : (GLY85) (THR102) [view usage] : a.4.6.1 |DNA/RNA-binding 3-helical bundle |C-terminal effector domain of the bipartite response regulators |PhoB-like |PhoB |Escherichia coli [TaxId: 562]
d4e3qb_ : (TRP269) (ASP279) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Vibrio fluvialis [TaxId: 676]
d1ihjb_ : (THR83) (GLU101) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Inad |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d2bspa_ : (PRO207) (HIS222) [view usage] : b.80.1.1 |Single-stranded right-handed beta-helix |Pectin lyase-like |Pectate lyase-like |Pectate lyase |Bacillus subtilis [TaxId: 1423]
d1s9ha_ : (GLY339) (VAL357) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |Rep 40 protein helicase domain |Adeno-associated virus 2, AAV2 [TaxId: 10804]
d1gbea_ : (LEU231) (GLY245) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |alpha-Lytic protease |Lysobacter enzymogenes, 495 [TaxId: 69]
d2ynga1 : (GLN394) (ASN418) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |automated matches |Hiv-1 m:b_hxb2r [TaxId: 11706]
d3ps4b_ : (HIS1033) (THR1050) [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3nyia_ : (ILE271) (ARG288) [view usage] : c.119.1.0 |DAK1/DegV-like |DAK1/DegV-like |automated matches |automated matches |Eubacterium ventriosum [TaxId: 411463]
d1zm2b_ : (VAL419) (THR442) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Exotoxin A, C-terminal domain |Pseudomonas aeruginosa [TaxId: 287]
d3ak4a_ : (SER240) (THR254) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 358]
d2bgcb2 : (ALA3) (HIS23) [view usage] : b.82.3.3 |Double-stranded beta-helix |cAMP-binding domain-like |Listeriolysin regulatory protein PrfA, N-terminal domain |automated matches |Listeria monocytogenes [TaxId: 169963]
d2og1a_ : (GLY87) (HIS107) [view usage] : c.69.1.10 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carbon-carbon bond hydrolase |2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) |Burkholderia xenovorans [TaxId: 36873]
d2iqqa1 : (ILE82) (LEU96) [view usage] : d.81.2.1 |FwdE/GAPDH domain-like |Serine metabolism enzymes domain |Serine dehydratase beta chain-like |L-serine dehydratase SdhL, N-terminal domain |Legionella pneumophila [TaxId: 446]
d3gg5d_ : (HIS28) (GLY60) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3oojd1 : (LEU197) (GLU207) [view usage] : d.153.1.0 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1ii2a1 : (THR393) (GLY416) [view usage] : c.91.1.1 |PEP carboxykinase-like |PEP carboxykinase-like |PEP carboxykinase C-terminal domain |Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) |Trypanosoma cruzi [TaxId: 5693]
d1g24a_ : (SER207) (PRO218) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Exoenzyme c3 |Clostridium botulinum [TaxId: 1491]
d2yzga1 : (GLU47) (GLU60) [view usage] : c.30.1.0 |PreATP-grasp domain |PreATP-grasp domain |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d1o22a_ : (ASN124) (GLU153) [view usage] : d.238.1.1 |Hypothetical protein TM0875 |Hypothetical protein TM0875 |Hypothetical protein TM0875 |Hypothetical protein TM0875 |Thermotoga maritima [TaxId: 2336]
d2o5ub_ : (LEU8) (TRP22) [view usage] : d.38.1.1 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |4HBT-like |Hypothetical thioesterase PA5185 |Pseudomonas aeruginosa [TaxId: 287]
d2cc0a1 : (ILE165) (GLY180) [view usage] : c.6.2.3 |7-stranded beta/alpha barrel |Glycoside hydrolase/deacetylase |NodB-like polysaccharide deacetylase |Acetyl-xylan esterase |Streptomyces lividans [TaxId: 1916]
d1q2da_ : (GLN182) (HIS203) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Catalytic domain of GCN5 histone acetyltransferase |Tetrahymena thermophila [TaxId: 5911]
d2ohdc_ : (VAL119) (ARG139) [view usage] : d.58.21.0 |Ferredoxin-like |Molybdenum cofactor biosynthesis protein C, MoaC |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
d1edoa_ : (SER241) (ASP255) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |beta-keto acyl carrier protein reductase |Oil seed rape (Brassica napus) [TaxId: 3708]
d1f4da_ : (LYS2) (GLY31) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Escherichia coli [TaxId: 562]
d1mzoa_ : (ALA508) (GLY528) [view usage] : c.7.1.1 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |PFL-like |Pyruvate formate-lyase, PFL |Escherichia coli [TaxId: 562]
d2fwra2 : (ARG152) (SER165) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |DNA repair protein RAD25 |Archaeoglobus fulgidus [TaxId: 2234]
d3ipza_ : (THR68) (MET88) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1cm5a_ : (ALA508) (GLY528) [view usage] : c.7.1.1 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |PFL-like |Pyruvate formate-lyase, PFL |Escherichia coli [TaxId: 562]
d1wu7a2 : (TYR16) (PRO45) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |Histidyl-tRNA synthetase (HisRS) |Thermoplasma acidophilum [TaxId: 2303]
d4pv4a1 : (GLN4) (PHE26) [view usage] : c.55.2.0 |Ribonuclease H-like motif |Creatinase/prolidase N-terminal domain |automated matches |automated matches |Yersinia pestis [TaxId: 632]
d4afna_ : (SER227) (ASN241) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d1r17b2 : (ASN514) (PHE530) [view usage] : b.2.3.4 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |Fibrinogen-binding domain |Fibrinogen-binding adhesin SdrG |Staphylococcus epidermidis [TaxId: 1282]
d1sv6a_ : (LEU205) (GLY231) [view usage] : d.177.1.1 |FAH |FAH |FAH |2-keto-4-pentenoate hydratase MhpD |Escherichia coli [TaxId: 562]
d1ujua_ : (THR81) (LEU99) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Scribble (KIAA0147) |Human (Homo sapiens) [TaxId: 9606]
d1b7go2 : (HIS193) (PRO214) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |Sulfolobus solfataricus [TaxId: 2287]
d1p4la2 : (GLU58) (ILE98) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class I MHC, alpha-1 and alpha-2 domains |Mouse (Mus musculus), H-2KB [TaxId: 10090]
d3i48a_ : (GLU203) (GLY220) [view usage] : d.151.1.0 |DNase I-like |DNase I-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 561307]
d1boqa_ : (LEU184) (GLY198) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |alpha-Lytic protease |Lysobacter enzymogenes, 495 [TaxId: 69]
d2nqub2 : (THR158) (ILE175) [view usage] : b.103.1.1 |MoeA N-terminal region -like |MoeA N-terminal region -like |MoeA N-terminal region -like |Molybdenum cofactor biosynthesis protein MoeA, N-terminal and linker domains |Escherichia coli [TaxId: 562]
d1yqga2 : (SER92) (MSE110) [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Pyrroline-5-carboxylate reductase ProC |Neisseria meningitidis, serogroup B [TaxId: 487]
d1bxra6 : (GLN739) (HIS754) [view usage] : d.142.1.2 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |BC ATP-binding domain-like |Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains |Escherichia coli [TaxId: 562]
d4nbzd_ : (ASP107) (VAL122) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Llama (Lama glama) [TaxId: 9844]
d3p3na_ : (ASN166) (GLY190) [view usage] : b.82.2.6 |Double-stranded beta-helix |Clavaminate synthase-like |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Human (Homo sapiens) [TaxId: 9606]
d1josa_ : (SER75) (TYR98) [view usage] : d.52.7.1 |Alpha-lytic protease prodomain-like |Ribosome-binding factor A, RbfA |Ribosome-binding factor A, RbfA |Ribosome-binding factor A, RbfA |Haemophilus influenzae [TaxId: 727]
d3i46a_ : (GLU203) (GLY220) [view usage] : d.151.1.0 |DNase I-like |DNase I-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 561307]
d3zqda2 : (HIS146) (ARG167) [view usage] : b.160.1.1 |L,D-transpeptidase catalytic domain-like |L,D-transpeptidase catalytic domain-like |L,D-transpeptidase catalytic domain-like |automated matches |Bacillus subtilis [TaxId: 224308]
d1usya_ : (PHE6) (PRO27) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |ATP phosphoribosyltransferase regulatory subunit HisZ |Thermotoga maritima [TaxId: 2336]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.80, b.70, e.8, e.3, c.1, c.10, b.82, c.67, b.19, c.69, c.94, c.2, c.6, d.58, c.108, b.29, c.26, b.67, b.47, d.157,
d.117, c.66, d.92, d.165, b.50, c.23, d.144, b.40, c.37, c.7, d.104, c.18, c.47, c.55, d.166, d.153, d.151, b.60, b.18, d.14,
b.121, d.81, b.2, b.1, d.126, c.78, d.108, d.110, c.73, d.17, c.41, d.38, b.179, c.116, d.19, d.177, c.61, d.79, d.142, d.131,
b.91, a.4, d.90, d.5, c.48, e.26, c.91, b.113, c.88, c.30, d.15, b.7, b.43, a.29, d.175, d.113, a.26, d.130, c.119, b.36,
d.24, d.52, d.198, b.12, c.143, d.77, d.323, b.8, d.173, d.212, b.103, b.160, d.375, d.245, d.238