Tableau information
Concept source: d2w88a_ amino acid (a.a.) range (LYS53)(GLN63)
nSSEs in this Concept: 2
String of secondary struct.elems. (SSEs) defining this concept: HE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS53) (LEU59) H1
(LEU59) (GLN63) E2
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -47.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1qm9a2 : (LEU183) (THR197) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Polypyrimidine tract-binding protein |Human (Homo sapiens) [TaxId: 9606]
d4liha_ : (THR5) (ARG21) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d1g0ca_ : (HIS360) (ALA371) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Alkaline cellulase K catalytic domain |Bacillus sp. [TaxId: 1409]
d2bwla_ : (ARG5) (LYS17) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1jv4a_ : (GLU33) (GLU43) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Major urinary protein/alpha-2u-globulin |Mouse (Mus musculus) [TaxId: 10090]
d2aejb2 : (TYR247) (ILE269) [view usage] : d.286.1.1 |TrkA C-terminal domain-like |TrkA C-terminal domain-like |TrkA C-terminal domain-like |Potassium channel-related protein MthK, C-terminal domain |Methanothermobacter thermautotrophicus [TaxId: 145262]
d1k62b_ : (ASN322) (GLU358) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Human (Homo sapiens) [TaxId: 9606]
d3suna2 : (ASN775) (SER784) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
d1fx7b3 : (PRO218) (GLU228) [view usage] : b.34.1.2 |SH3-like barrel |C-terminal domain of transcriptional repressors |FeoA-like |Iron-dependent regulator IdeR |Mycobacterium tuberculosis [TaxId: 1773]
d1rjta_ : (LYS20) (ILE29) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |Small inducible cytokine b11 (CXCL11/I-TAC) |Human (Homo sapiens) [TaxId: 9606]
d3my0n_ : (MET0) (GLU206) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3rgwl_ : (ASP341) (VAL349) [view usage] : e.18.1.0 |HydB/Nqo4-like |HydB/Nqo4-like |automated matches |automated matches |Ralstonia eutropha [TaxId: 381666]
d4hn0d_ : (SER90) (PRO100) [view usage] : b.82.1.0 |Double-stranded beta-helix |RmlC-like cupins |automated matches |automated matches |Streptomyces bikiniensis [TaxId: 1896]
d2au7a_ : (ASP10) (ILE19) [view usage] : b.40.5.1 |OB-fold |Inorganic pyrophosphatase |Inorganic pyrophosphatase |Inorganic pyrophosphatase |Escherichia coli [TaxId: 562]
d1js4a2 : (PRO572) (TYR594) [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Endo/exocellulase:cellobiose E-4, C-terminal domain |Thermobifida fusca [TaxId: 2021]
d1iasa_ : (VAL299) (VAL321) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Type I TGF-beta receptor R4 |Human (Homo sapiens) [TaxId: 9606]
d3pnla_ : (SER169) (ILE189) [view usage] : c.119.1.2 |DAK1/DegV-like |DAK1/DegV-like |DAK1 |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3tqqa2 : (GLN207) (ARG216) [view usage] : b.46.1.0 |FMT C-terminal domain-like |FMT C-terminal domain-like |automated matches |automated matches |Coxiella burnetii [TaxId: 777]
d1noja_ : (ASN325) (ASN338) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1jh5a_ : (ASP132) (LEU143) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Soluble part of TALL-1, sTALL-1 (BAFF) |Human (Homo sapiens) [TaxId: 9606]
d2f5ah1 : (ALA109) (ILE130) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Engineered (including hybrid species)
d1fswa_ : (PRO192) (GLU205) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Escherichia coli, cephalosporinase [TaxId: 562]
d3obxa_ : (LEU124) (PRO145) [view usage] : d.20.1.2 |UBC-like |UBC-like |UEV domain |Tumor susceptibility gene 101 (TSG101) |Human (Homo sapiens) [TaxId: 9606]
d3u4jd_ : (ASP12) (MSE23) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]
d2icyb2 : (VAL70) (ASN86) [view usage] : c.68.1.5 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |UDP-glucose pyrophosphorylase |UDP-glucose pyrophosphorylase 2 (UDPGP 2) |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1irue_ : (GLU60) (ASP71) [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome alpha subunit (non-catalytic) |Cow (Bos taurus) [TaxId: 9913]
d1pov3_ : (MET43) (ASP56) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Poliovirus coat proteins |Poliovirus type 1, strain Mahoney [TaxId: 12080]
d1hvxa2 : (GLN319) (VAL327) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Bacterial alpha-amylase |Bacillus stearothermophilus [TaxId: 1422]
d3jw0d_ : (VAL840) (ASN851) [view usage] : d.148.1.0 |Hect, E3 ligase catalytic domain |Hect, E3 ligase catalytic domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1bvza1 : (GLU104) (TYR113) [view usage] : b.1.18.2 |Immunoglobulin-like beta-sandwich |E set domains |E-set domains of sugar-utilizing enzymes |Maltogenic amylase, N-terminal domain N |Thermoactinomyces vulgaris, TVAII [TaxId: 2026]
d1i0ab_ : (SER322) (GLU358) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Turkey (Meleagris gallopavo), delta-crystallin [TaxId: 9103]
d1f42a1 : (GLU59) (LYS70) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |The p40 domain of interleukin-12 (IL-12 beta chain), N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d4b5cb_ : (ASP154) (GLN169) [view usage] : d.79.7.0 |Bacillus chorismate mutase-like |OmpA-like |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 28450]
d3u4ja_ : (ASP12) (MSE23) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]
d1eah3_ : (MET43) (LEU55) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Poliovirus coat proteins |Poliovirus type 2, strain Lansing [TaxId: 12083]
d3rlna2 : (GLY720) (GLU729) [view usage] : b.40.16.1 |OB-fold |HIN-2000 domain-like |HIN-200/IF120x domain |Gamma-interferon-inducible protein Ifi-16 |Human (Homo sapiens) [TaxId: 9606]
d4q4v3_ : (MET43) (MET55) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |automated matches |Coxsackievirus a24 [TaxId: 12089]
d4erhb_ : (LEU328) (GLY340) [view usage] : d.79.7.0 |Bacillus chorismate mutase-like |OmpA-like |automated matches |automated matches |Salmonella enterica [TaxId: 588858]
d2d0vi_ : (VAL37) (GLY49) [view usage] : b.70.1.1 |8-bladed beta-propeller |Quinoprotein alcohol dehydrogenase-like |Quinoprotein alcohol dehydrogenase-like |automated matches |Hyphomicrobium denitrificans [TaxId: 53399]
d1p42a1 : (TRP109) (ASN124) [view usage] : d.14.1.7 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC |UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC |Aquifex aeolicus [TaxId: 63363]
d2f1na1 : (ASP161) (GLY173) [view usage] : d.151.1.1 |DNase I-like |DNase I-like |DNase I-like |Cytolethal distending toxin subunit B |Escherichia coli [TaxId: 562]
d1wcmk_ : (ASP5) (PRO23) [view usage] : i.8.1.1 |RNA polymerase |RNA polymerase |RNA polymerase |Complete 12-subunit RNA polymerase II complex |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3gaga_ : (GLY0) (ARG17) [view usage] : d.90.1.0 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |automated matches |automated matches |Streptococcus mutans [TaxId: 1309]
d4msva_ : (GLU270) (LYS280) [view usage] : b.22.1.0 |TNF-like |TNF-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3rloa2 : (GLY720) (GLU729) [view usage] : b.40.16.1 |OB-fold |HIN-2000 domain-like |HIN-200/IF120x domain |Gamma-interferon-inducible protein Ifi-16 |Human (Homo sapiens) [TaxId: 9606]
d3nahb_ : (ASP410) (GLY423) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Murine norovirus 1 [TaxId: 223997]
d4q4w3_ : (MET43) (MET55) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |automated matches |Coxsackievirus a24 [TaxId: 12089]
d1m44a_ : (PRO150) (ASP162) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Aminoglycoside 2'-N-acetyltransferase |Mycobacterium tuberculosis [TaxId: 1773]
d1hoca1 : (LEU251) (HIS263) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Class I MHC, alpha-3 domain |Mouse (Mus musculus) [TaxId: 10090]
d2nzma_ : (GLN106) (ALA127) [view usage] : b.80.1.1 |Single-stranded right-handed beta-helix |Pectin lyase-like |Pectate lyase-like |automated matches |Bacillus subtilis [TaxId: 1423]
d1c7sa2 : (GLN29) (MET44) [view usage] : b.2.2.3 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Bacterial chitobiase, n-terminal domain |Bacterial chitobiase, n-terminal domain |Serratia marcescens [TaxId: 615]
d1fr1a_ : (PRO192) (GLU205) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Citrobacter freundii [TaxId: 546]
d3n44f1 : (SER113) (ARG123) [view usage] : f.10.1.0 |Viral glycoprotein, central and dimerisation domains |Viral glycoprotein, central and dimerisation domains |automated matches |automated matches |Chikungunya virus [TaxId: 37124]
d1v1pb1 : (ILE25) (ASN41) [view usage] : b.40.2.2 |OB-fold |Bacterial enterotoxins |Superantigen toxins, N-terminal domain |Exotoxin 1 (SET1, Superantigen-like protein 7) |Staphylococcus aureus [TaxId: 1280]
d2ff7a_ : (PRO538) (VAL548) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Haemolysin B ATP-binding protein |Escherichia coli [TaxId: 562]
d3hvma_ : (SER321) (TYR330) [view usage] : d.126.1.6 |Pentein, beta/alpha-propeller |Pentein |Porphyromonas-type peptidylarginine deiminase |Putative peptidyl-arginine deiminase |Helicobacter pylori J99 [TaxId: 85963]
d1fx7a3 : (PRO218) (GLU228) [view usage] : b.34.1.2 |SH3-like barrel |C-terminal domain of transcriptional repressors |FeoA-like |Iron-dependent regulator IdeR |Mycobacterium tuberculosis [TaxId: 1773]
d2cmua1 : (SER323) (TYR332) [view usage] : d.126.1.6 |Pentein, beta/alpha-propeller |Pentein |Porphyromonas-type peptidylarginine deiminase |Putative peptidyl-arginine deiminase |Helicobacter pylori J99 [TaxId: 85963]
d3n40f1 : (SER113) (ARG123) [view usage] : f.10.1.1 |Viral glycoprotein, central and dimerisation domains |Viral glycoprotein, central and dimerisation domains |Viral glycoprotein, central and dimerisation domains |automated matches |Chikungunya virus [TaxId: 37124]
d2mev3_ : (PHE44) (LYS57) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Mengo encephalomyocarditis virus coat proteins |Mengovirus [TaxId: 12107]
d1zm8a_ : (PRO55) (GLN82) [view usage] : d.4.1.2 |His-Me finger endonucleases |His-Me finger endonucleases |DNA/RNA non-specific endonuclease |Nuclease NucA |Nostoc sp. PCC 7120 [TaxId: 103690]
d1iwga1 : (PRO119) (GLU130) [view usage] : d.58.44.1 |Ferredoxin-like |Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |Escherichia coli [TaxId: 562]
d1aym3_ : (LEU43) (ILE55) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Rhinovirus coat proteins |Human rhinovirus 16, (HRV-16) [TaxId: 31708]
d3n41f1 : (SER113) (ARG123) [view usage] : f.10.1.1 |Viral glycoprotein, central and dimerisation domains |Viral glycoprotein, central and dimerisation domains |Viral glycoprotein, central and dimerisation domains |automated matches |Chikungunya virus [TaxId: 37124]
d1tyqb1 : (ARG294) (GLY305) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin-related protein 2, Arp2 |Cow (Bos taurus) [TaxId: 9913]
d1v1oa1 : (ILE25) (ASN41) [view usage] : b.40.2.2 |OB-fold |Bacterial enterotoxins |Superantigen toxins, N-terminal domain |Exotoxin 1 (SET1, Superantigen-like protein 7) |Staphylococcus aureus [TaxId: 1280]
d2zjcb_ : (SER146) (ALA156) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Tumor necrosis factor (TNF) |Human (Homo sapiens) [TaxId: 9606]
d2bjqa1 : (GLY333) (ARG344) [view usage] : b.169.1.1 |MFPT repeat-like |MFPT repeat-like |MFPT repeat |Sperm motility protein MFP2 |Pig roundworm (Ascaris suum), isoform A [TaxId: 6253]
d1fw9a_ : (PRO3) (LYS15) [view usage] : d.190.1.1 |Chorismate lyase-like |Chorismate lyase-like |Chorismate lyase |Chorismate lyase |Escherichia coli [TaxId: 562]
d3ukrb_ : (ARG294) (GLY305) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin-related protein 2, Arp2 |Cow (Bos taurus) [TaxId: 9913]
d1ka8a_ : (PRO4) (PRO16) [view usage] : a.4.5.20 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |P4 origin-binding domain-like |P4 origin-binding domain |Bacteriophage P4 [TaxId: 10680]
d1neka1 : (GLN509) (PHE543) [view usage] : a.7.3.1 |Spectrin repeat-like |Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |Succinate dehydogenase |Escherichia coli [TaxId: 562]
d3stvb_ : (ALA188) (SER198) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Lycopersicon hirsutum [TaxId: 283673]
d2iera1 : (GLY108) (ASN124) [view usage] : d.14.1.7 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC |UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC |Aquifex aeolicus [TaxId: 63363]
d2hrua1 : (TYR144) (VAL157) [view usage] : d.79.4.1 |Bacillus chorismate mutase-like |PurM N-terminal domain-like |PurM N-terminal domain-like |Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 |Thermotoga maritima [TaxId: 2336]
d1fpn3_ : (LEU43) (ILE55) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Rhinovirus coat proteins |Human rhinovirus A 2 (HRV-2) [TaxId: 12130]
d2hs0a1 : (TYR144) (VAL157) [view usage] : d.79.4.1 |Bacillus chorismate mutase-like |PurM N-terminal domain-like |PurM N-terminal domain-like |Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 |Thermotoga maritima [TaxId: 2336]
d2x9bb_ : (THR3) (ASP14) [view usage] : b.37.1.0 |N-terminal domains of the minor coat protein g3p |N-terminal domains of the minor coat protein g3p |automated matches |automated matches |Enterobacteria phage [TaxId: 10868]
d3s4xa_ : (PRO192) (ASP205) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]
d4gcja_ : (SER-3) (GLU8) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Cyclin-dependent PK, CDK2 |Human (Homo sapiens) [TaxId: 9606]
d1nj8a3 : (ARG139) (SER158) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |Prolyl-tRNA synthetase (ProRS) |Methanocaldococcus jannaschii [TaxId: 2190]
d2bwka_ : (ARG5) (LYS17) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3daba_ : (PRO95) (LEU109) [view usage] : a.42.1.0 |SWIB/MDM2 domain |SWIB/MDM2 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3iwqb_ : (PRO192) (GLU205) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Escherichia coli, cephalosporinase [TaxId: 562]
d1de5b_ : (HIS46) (ASN72) [view usage] : c.1.15.2 |TIM beta/alpha-barrel |Xylose isomerase-like |L-rhamnose isomerase |L-rhamnose isomerase |Escherichia coli [TaxId: 562]
d1vlca_ : (TYR138) (ASP149) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |3-isopropylmalate dehydrogenase, IPMDH |Thermotoga maritima [TaxId: 2336]
d1shtx_ : (ASP98) (VAL115) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |Capillary morphogenesis protein 2 domain |Human (Homo sapiens) [TaxId: 9606]
d3my0d_ : (GLN195) (GLU206) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ibsa1 : (PRO25) (ARG39) [view usage] : c.66.1.27 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |DNA methylase TaqI, N-terminal domain |DNA methylase TaqI, N-terminal domain |Thermus aquaticus [TaxId: 271]
d3mc0b2 : (SER117) (ASP133) [view usage] : d.15.6.0 |beta-Grasp (ubiquitin-like) |Superantigen toxins, C-terminal domain |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
d2jg3a1 : (PRO25) (PRO38) [view usage] : c.66.1.27 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |DNA methylase TaqI, N-terminal domain |automated matches |Thermus aquaticus [TaxId: 271]
d3ea6a1 : (GLY5) (ASP23) [view usage] : b.40.2.0 |OB-fold |Bacterial enterotoxins |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
d2a8tb_ : (ASP146) (TYR160) [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |automated matches |African clawed frog (Xenopus laevis) [TaxId: 8355]
d3my0c_ : (MET0) (GLU206) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1c3qa1 : (THR256) (VAL269) [view usage] : c.72.1.2 |Ribokinase-like |Ribokinase-like |Thiamin biosynthesis kinases |Hydroxyethylthiazole kinase (THZ kinase, ThiK) |Bacillus subtilis [TaxId: 1423]
d4oera_ : (PRO126) (ALA141) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Nickel-binding periplasmic protein NikA |Brucella suis [TaxId: 29461]
d1y54a_ : (PRO192) (ASP205) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Enterobacter cloacae [TaxId: 550]
d1jzua_ : (ARG6) (VAL16) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Lipocalin q83 |Common quail (Coturnix coturnix) [TaxId: 9091]
d3tloa_ : (TYR53) (HIS63) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |Human coronavirus [TaxId: 443239]
d2wkib_ : (ASP55) (ALA66) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |Class D beta-lactamase |Pseudomonas aeruginosa, OXA-10 [TaxId: 287]
d2mhaa1 : (LEU251) (TYR262) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Class I MHC, alpha-3 domain |Mouse (Mus musculus) [TaxId: 10090]
d2x9ba_ : (THR3) (ASP14) [view usage] : b.37.1.0 |N-terminal domains of the minor coat protein g3p |N-terminal domains of the minor coat protein g3p |automated matches |automated matches |Enterobacteria phage [TaxId: 10868]
d2xacb_ : (SER16) (PRO34) [view usage] : g.17.1.0 |Cystine-knot cytokines |Cystine-knot cytokines |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4lihb_ : (THR5) (ARG21) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d3b0ga4 : (PRO431) (CYS440) [view usage] : d.134.1.0 |Nitrite and sulphite reductase 4Fe-4S domain-like |Nitrite and sulphite reductase 4Fe-4S domain-like |automated matches |automated matches |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d2p9sb_ : (ARG294) (GLY305) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin-related protein 2, Arp2 |Cow (Bos taurus) [TaxId: 9913]
d2ckda1 : (ASP297) (ALA307) [view usage] : c.66.1.57 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |ML2640-like |Putative methyltransferase ML2640 |Mycobacterium leprae [TaxId: 1769]
d2g9hd1 : (ILE4) (GLY23) [view usage] : b.40.2.2 |OB-fold |Bacterial enterotoxins |Superantigen toxins, N-terminal domain |Enterotoxin type I, SEI |Staphylococcus aureus [TaxId: 1280]
d3vbfc_ : (LEU43) (GLU54) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |automated matches |Human enterovirus 71 [TaxId: 39054]
d1g38a1 : (PRO25) (ARG39) [view usage] : c.66.1.27 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |DNA methylase TaqI, N-terminal domain |DNA methylase TaqI, N-terminal domain |Thermus aquaticus [TaxId: 271]
d2r92k1 : (ASP5) (PRO23) [view usage] : i.8.1.1 |RNA polymerase |RNA polymerase |RNA polymerase |Complete 12-subunit RNA polymerase II complex |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1ygaa_ : (ASN48) (ARG65) [view usage] : b.30.5.0 |Supersandwich |Galactose mutarotase-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4iwna_ : (SER196) (SER210) [view usage] : c.66.1.14 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Hypothetical protein HI0319 (YecO) |automated matches |Escherichia coli [TaxId: 562]
d1zj8a3 : (SER408) (CYS417) [view usage] : d.134.1.1 |Nitrite and sulphite reductase 4Fe-4S domain-like |Nitrite and sulphite reductase 4Fe-4S domain-like |Nitrite and sulphite reductase 4Fe-4S domain-like |Sulfite reductase NirA |Mycobacterium tuberculosis [TaxId: 1773]
d2vkaa_ : (CYS278) (VAL289) [view usage] : a.93.1.0 |Heme-dependent peroxidases |Heme-dependent peroxidases |automated matches |automated matches |Pleurotus eryngii [TaxId: 5323]
d1p92a3 : (ASP215) (LEU226) [view usage] : b.34.1.2 |SH3-like barrel |C-terminal domain of transcriptional repressors |FeoA-like |Diphtheria toxin repressor (DtxR) |Corynebacterium diphtheriae [TaxId: 1717]
d2akja3 : (PRO432) (THR442) [view usage] : d.134.1.1 |Nitrite and sulphite reductase 4Fe-4S domain-like |Nitrite and sulphite reductase 4Fe-4S domain-like |Nitrite and sulphite reductase 4Fe-4S domain-like |Ferredoxin--nitrite reductase, NIR |Spinach (Spinacia oleracea) [TaxId: 3562]
d3my0o_ : (GLN195) (GLU206) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4l0pb_ : (PRO69) (VAL77) [view usage] : b.6.1.5 |Cupredoxin-like |Cupredoxins |Ephrin ectodomain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3gdra_ : (THR161) (GLY190) [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1rhi3_ : (LEU43) (MET55) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |Rhinovirus coat proteins |Human rhinovirus 3, (HRV-3) [TaxId: 44130]
d2zc7b_ : (PRO192) (ASP205) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Klebsiella pneumoniae [TaxId: 573]
d3azwa2 : (TYR1267) (PRO1282) [view usage] : b.42.4.0 |beta-Trefoil |STI-like |automated matches |automated matches |Clostridium botulinum [TaxId: 1491]
d1ejja1 : (ARG203) (ARG214) [view usage] : c.105.1.1 |2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain |2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain |2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain |2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain |Bacillus stearothermophilus [TaxId: 1422]
d1vsyd_ : (ASP4056) (ASP4068) [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1o7fa3 : (SER343) (ALA360) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |Regulatory domain of Epac2, domains 1 and 3 |Mouse (Mus musculus) [TaxId: 10090]
d3fpqb_ : (THR70) (PRO90) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Protein kinase wnk1 |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.80, b.70, e.8, e.3, c.1, b.82, c.69, c.94, d.58, c.68, c.82, b.30, b.47, c.66, c.77, a.93, a.127, e.18, c.72, d.144,
b.40, c.37, d.104, c.55, d.153, d.151, b.60, d.14, b.121, c.87, b.2, c.62, b.6, b.1, d.126, d.108, d.20, b.42, d.79, d.134,
b.22, b.34, a.4, d.90, d.5, d.15, d.148, i.8, d.113, b.37, a.42, d.4, c.119, g.17, c.105, d.9, a.7, f.10, b.169, d.190,
d.286, b.46